KEGG   Cardiocondyla obscurior: 139101830
Entry
139101830         CDS       T10704                                 
Symbol
Prp38
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
cobs  Cardiocondyla obscurior
Pathway
cobs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cobs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139101830 (Prp38)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cobs03041]
    139101830 (Prp38)
Spliceosome [BR:cobs03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    139101830 (Prp38)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    139101830 (Prp38)
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 139101830
NCBI-ProteinID: XP_070511377
LinkDB
Position
LG04:complement(7542443..7544319)
AA seq 307 aa
MANRTVKDAKSIRGTNPQYLIEKIIRSRIYDSKYWKEECFALTAELLVDKAMELRYLGGV
YGGNVKPTPFLCLILKMLQIQPEKDIIVEFIKNEEYKYVRALGALYMRLTGSSLDCYKYL
EPLFNDNRKLRMQNKQGVFELVHMDEFIDHLLREERCCDVILPRIQKRHVLEENNELEAK
ISALEDDMDDGIESSEEEEIAPIKELPRKRSDDHERDRDRHRDRDKRHSRSDKKSDKEKQ
RSRSRDRDRDRDRRERKRSKSPKSYSSSHKDKDRDRDRHRRDDRDRERERERERERDRRR
ERDRNRH
NT seq 924 nt   +upstreamnt  +downstreamnt
atggcaaaccgcacggtgaaagacgcgaaatctattcgcgggacaaatccgcagtattta
atcgagaaaatcattagatctcggatatacgactccaaatattggaaggaagaatgtttt
gcgctgacagccgagctattagtcgacaaggcgatggagttgagatatctaggaggcgtg
tacggcggcaatgtaaagcctacgccgtttctctgtcttatattaaaaatgctccaaata
caaccagagaaagacatcatagtcgaatttataaaaaacgaggaatataaatacgtcagg
gctttgggtgcactgtacatgagactgactgggtcttccctggattgctacaagtatctc
gagccattatttaacgacaacagaaagcttagaatgcaaaacaagcaaggtgtgtttgag
ctcgtacacatggatgaatttattgaccatctcctcagagaagaaaggtgttgcgacgtt
attttaccgaggattcaaaagagacacgttttagaagaaaataatgaactggaagcaaag
atatcagcgttagaagacgatatggatgacggtatcgaatcgtcggaggaagaagaaatt
gcgccaatcaaagaattgccacgcaagaggtcagacgatcacgaacgggacagagatcgt
cacagggatagggataagagacattctcggtccgataagaaatctgacaaggaaaagcaa
agatcgagaagtagagatagagatagagacagggacaggagagaacgtaaacgcagtaaa
tcaccaaaatcttattcgtcgtcgcacaaggataaagatagggacagagatcgtcacaga
agagacgatagagacagagaaagagaacgggaacgagaaagggagcgagatcgtagaaga
gaacgtgatagaaatagacattaa

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