KEGG   Cardiocondyla obscurior: 139101854
Entry
139101854         CDS       T10704                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
  KO
K20101  ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
Organism
cobs  Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:cobs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cobs03019]
    139101854
Enzymes [BR:cobs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     139101854
Messenger RNA biogenesis [BR:cobs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     139101854
SSDB
Motif
Pfam: Helicase_C zf-C2H2_DHX34 DEAD OB_NTP_bind HA2_C ResIII AAA_22 nSTAND3 AAA_19 HA2_N AAA_7
Other DBs
NCBI-GeneID: 139101854
NCBI-ProteinID: XP_070511418
LinkDB
Position
LG04:complement(2202329..2207550)
AA seq 1171 aa
MSRYEKKQRSRSPGHDSKRREDDRYYGRKYRDTRESHKGSSSRSVQGNRETHELSAENRP
GGSNEDSCFSKYKHELNRVFTANPNLVHDVADFWKFVEKFESVKKRLGDNVDESATDSAL
NSIGVPERYHKSHCLNLKLDLSYGELFARVPDTKSLTKSQLLKFRDVILLYLDFKQKEKF
AKLKRLRDTQTNLPVARYREEIIEMIKMEKVVIIAGDTGCGKSTQIPRYLYEAGFQKIAC
TQPRRIACISLAKRVTFETLSENVSRVGYQIRFEKQKNQETNITFITEGLLLRQLSGEST
ISTYDVIVLDEVHERHLHGDFLLGIMKCIINQKPDLKLVLMSATINIELFSNYFAKENVK
VIEVPGRLYPIQLLYRPITVQDLAYKNDRFNPSPYVQIMQIIDQKYPINEKGDLLIFLSG
ISEITAVVDAAKEYSMKKNNWIVLPLHSTLSIVEQDKVFDYAPEGVRKCIVATNIAETSI
TIDGIRFVADSGKVKEMSYDPLCKMQRLKEFWISKASAEQRKGRAGRTGPGVCYRIYSEE
EYKILEKYSTPELQRVPLDSSLLQMIAMGLPDARKFPFIESPPASSIENAISSLKDHGAL
TDNEKITCIGKTLARLPVDIVIGKMLIMGSIFHQVEPVLSLAAALSIQTPFTNRAYRDTE
CETSRKKLESDHGDPITLLNAFKEWLEVKQENSQEYRSSSNSSRKWCRRRGLEEQRFYEM
TKLRSQFKDLLQDCNLLKSLPEPNSSMTSAERAIRHGELKLLKSLKRTYKQSEPRKRKQL
KVETFDIQFENNDEDNEELDIKDIEFRMRNDSSQVQNLLTASTACSYKDLTMLKLILCSG
LYPQFACADEFNYCKSPSEQLFHTKAKPYVALHPMSFFGNHPQVLQIEEEDVMAIAGFKS
KTPVSSKNQILAYLSLLETTKPYLVNTLRMPAAQTLLLFAHEIDTNSTISIIACDSWLML
EFPVPDTGQVLLMKAVKLRNKWDFLLNQQLQGSDNTNDERKDFSKIEQSLMQELIEYMHT
TVPYTIKRLLPADLKMIYVGNGNNNANIEPNPFQSDFKSIPNVIKGGTYLTDNITYNCIK
ETNWSEQLIIEMQETEWHCKNCDLRGILSSIEKLQHQNSCTIADTTSDDKESGSITRKAN
SQAYECPNCLLTLYLTPIEILKHKKSHIKAS
NT seq 3516 nt   +upstreamnt  +downstreamnt
atgtcaaggtacgaaaaaaagcaacgttcgcgttctcccggtcacgacagtaaacgcagg
gaggatgacaggtattacggaaggaagtatcgcgatactcgcgaaagtcataaaggcagc
tcttcgagatccgtacaaggtaaccgagaaacgcacgagttgtccgcggaaaatcgtccc
ggaggcagcaacgaagattcgtgtttcagtaaatataagcacgaattgaatagagttttc
acagcgaatccaaatcttgtccacgacgtcgcggacttctggaaatttgtcgaaaaattc
gagtccgttaagaaacgattaggcgacaacgtagacgagtctgcgacagattccgctctg
aattctatcggagttccggaaagatatcacaagtcgcattgtttaaacttgaaactcgac
ttgtcctacggagaattgtttgctagagtcccggatacgaaatcgttgaccaaatcacaa
ttgctaaagtttagagatgtaatactcttgtacttggacttcaagcaaaaggagaagttt
gctaaattaaaaagactacgagacacacagactaacttgccggttgcgcgatacagagaa
gaaattattgagatgataaaaatggagaaagtagtcattatcgcaggagatactggttgt
ggaaaatctacacaaatcccgagatacttgtacgaagctggctttcagaaaattgcgtgt
acacaaccccgaagaatagcgtgcatttcgttagcgaaacgagtaacttttgaaacgttg
agtgagaatgttagtagagttggataccaaatacgttttgaaaaacaaaaaaatcaagaa
acaaacattacatttataacagagggtttactgttacgtcagttatcaggtgaatcaact
atatctacatatgacgtaatagtcttagacgaagtacatgaacgtcatctgcatggagat
tttttattaggcattatgaagtgtattattaatcagaaacctgatttaaaattagtactg
atgtctgccactatcaatatagaactttttagtaattattttgcaaaggaaaatgtgaaa
gtaatagaggttcctggaagattatatcccattcagttgttgtatcgccctataaccgta
caagatcttgcatataaaaatgatcgatttaatcctagtccatatgtgcaaataatgcaa
ataattgatcaaaaatatccaattaatgagaagggtgacttattaatattcttaagtgga
atcagtgaaattactgcagttgtagatgctgctaaggaatatagtatgaagaaaaataat
tggatagttttgccacttcacagtactctctctattgttgaacaagacaaggtttttgac
tatgcacctgagggtgttaggaagtgtattgtggcaactaatattgcagaaacctctatt
actatcgatggaatcagatttgttgctgatagtggaaaagtgaaagaaatgagttatgat
ccattgtgtaaaatgcaaagattgaaagaattttggataagcaaagccagtgcagaacaa
aggaaaggaagagcaggcagaactggacctggggtttgttatagaatttactcggaagaa
gagtacaaaatattggaaaaatactcaacacctgaattacagcgcgtacctttagattct
tcactattgcaaatgatagcgatgggacttcctgatgcgcgcaaatttccatttatagag
tcaccacctgccagtagcatagaaaacgctatatcatccttaaaagatcacggtgcgctt
acggataacgaaaaaatcacgtgtatcggtaaaactttggcacgactacccgttgatatt
gtaataggaaaaatgttaataatgggatccatttttcatcaagtggaacctgtgttatca
ttggcagctgctctaagtatacaaacaccatttactaacagagcttatagagacactgaa
tgtgagacatcgagaaaaaagttggaatctgatcatggcgatccaataacgttactaaat
gcatttaaagaatggttggaagtgaaacaagaaaattctcaggaatatagaagtagtagt
aatagtagtagaaaatggtgcagaagaagaggtttggaagaacaacgattctatgaaatg
acaaaattaagatctcagtttaaagatttgctccaggattgcaatttacttaaaagtctt
ccagaaccaaattcttccatgacaagcgcagaacgcgcaatacggcatggagaattaaaa
cttttaaaatctcttaaaagaacttacaaacaaagtgaacctagaaaacgcaaacaatta
aaagttgaaacatttgacatacaatttgagaataatgatgaagataatgaagagctcgac
ataaaagacatagaatttcgaatgagaaacgattcgagtcaagtgcaaaatcttttaacg
gcatctactgcgtgtagttataaagatctaaccatgttgaaattgatattatgtagtggt
ttatatccacaattcgcttgtgccgacgagtttaattattgcaagtcaccaagtgaacaa
ttatttcacactaaagcgaaaccgtatgttgctttgcatccaatgagcttttttggaaac
catccacaagttttacaaatcgaagaagaggatgtaatggcaatagcaggatttaagagt
aaaactccagtaagctctaaaaatcagatattggcatatttatctctcttggaaactaca
aaaccatatttggtaaatactttaagaatgcctgctgcacaaacattactattatttgca
catgaaatagacacaaatagtacaatctccataatagcatgtgattcgtggttaatgtta
gaatttcctgttcctgatactggtcaagttttactgatgaaagctgtgaaattaagaaat
aaatgggattttttattaaatcaacaattacaaggatccgacaatactaacgatgaaaga
aaagattttagtaaaattgagcaaagtctcatgcaagaactaattgaatatatgcatact
acggtaccatacactataaaacggttgttaccagctgatctgaaaatgatatatgttggt
aatggcaataataacgcaaatatagagcctaatccttttcagtctgactttaaaagtata
ccaaatgtaattaaaggtggaacttatctgacagacaatattacatacaattgcataaaa
gaaactaattggagcgaacagttaattatagaaatgcaagaaactgaatggcattgtaaa
aattgcgatttacgaggtattctatcgagtatcgaaaaacttcaacatcaaaactcttgt
acgatcgcagatacgactagtgacgataaagagagtggaagtattacgcgtaaagctaat
agtcaagcatatgagtgccccaattgtttgttaacattataccttacacctatcgaaata
ttaaaacataaaaaatcacacattaaagcaagctga

DBGET integrated database retrieval system