Cardiocondyla obscurior: 139102007
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Entry
139102007 CDS
T10704
Symbol
Heph
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139102007 (Heph)
03041 Spliceosome [BR:
cobs03041
]
139102007 (Heph)
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
139102007 (Heph)
Spliceosome [BR:
cobs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139102007 (Heph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
139102007
NCBI-ProteinID:
XP_070511695
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All DBs
Position
LG04:complement(8576918..8926438)
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AA seq
662 aa
AA seq
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MESQTELHRRLAKVGLIGNRIDLCSIHRRKILVKNLDSMMMTNLPPVMLPPITDYGMLTP
TLGIKVRIPDLSNFRPFPTAPFPVVSVQEFQYARGTGASLTMRGSDELLSQSGAVSNGAS
MSPQPHHAADNNNDAKKVKLDKSHSGKPSRVIHIRNIPNEVTEAEIIHLGLPFGRVTNVL
VLKGKNQAFLEMADENAAATMVTYYASGVAQLRGRAVYVQFSNHRELKTDQTHSNNAVSS
PTNDVANTSENSNNQVAIAGQNQVSGASETQGGPNTVLRVIVEHLLYPITLDILYQIFTR
FGKVLKIVTFTKNSSFQALIQYADVLSAQTAKFSLDGQNVYNSCCTLRIDYSKMQNLNVK
YNNDKSRDYTNPNLPTGDANLDAASLALSGELLLMGPGSQPRARIPVESIAGAPGVLPTP
FAMHGLASPLAGPYNGVPPAGGLAGLGGFPLGAAGLGVRVQGNAQASAVLLVSNLNEEMV
TPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPHQALLALTHMDKLRVFGKQIKVMLS
KHQTVQLPKEGQPDAGLTKDYTNSTLHRFKKPGSKNYQNIYPPSATLHLSNIPGTVAEEE
IKDAFTKNGFTVKAFKFFPKDRKMALIQMPNMDDAVAALIKMHNYQLSESNHLRVSFSKS
NI
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggagagccaaacggagcttcataggcgtctcgccaaggtaggtctaataggaaataga
attgatctgtgttcgatacaccgacggaaaatacttgtgaagaatttagacagtatgatg
atgacaaacctaccccctgttatgctgccgcccattacggactacgggatgctgacgcct
actctcggaataaaggtaagaattccagacctttcgaattttcgcccgtttcccacagca
ccgtttccggtggtgagtgtccaggaattccagtacgcgcgcgggacgggcgcgtcccta
acgatgaggggtagcgacgagcttctatcgcaaagcggggcagtcagcaatggtgcttca
atgagtccgcaacctcatcacgcggccgacaacaataatgacgcaaagaaggttaagctc
gacaagagtcacagcggcaaaccttccagagtcattcatattaggaacatacctaacgag
gtgacagaggcggagatcatccatctgggtctaccgttcggccgtgtcaccaatgtactc
gttctcaagggcaagaatcaggcgtttctcgaaatggcggacgagaatgctgcagctacc
atggtgacctactatgcttccggcgtggcccaactcagaggcagagcggtctacgttcag
ttcagcaatcaccgtgaactcaagacggatcaaacgcactccaacaacgcggtcagtagc
ccaacaaatgatgtcgccaacacctctgagaactcgaacaatcaggtcgcgatcgccggg
cagaatcaggtgtccggcgccagcgaaacgcagggcggacccaacaccgtgctccgagtc
atcgtggaacacctgctctacccgatcaccctcgacatactctatcagattttcacgcgc
tttggcaaggttctaaagatcgtcacgttcacaaagaacagctctttccaggcactaata
cagtacgcggacgtgctgtcggcgcagaccgctaaattttcgctcgacgggcaaaatgtc
tacaactcctgctgcacgctgcgcatcgactacagcaagatgcaaaatttgaacgttaag
tacaataatgacaagtctcgagattacaccaacccgaatctcccgaccggcgacgccaat
ctggatgctgcgtcgctcgctctaagcggcgaattgctactcatgggtcccggttctcag
ccgcgtgccagaatacccgtagagtccattgcaggggcaccgggtgtgctgcccacgccc
tttgccatgcacggcctcgcatcacccttggccggtccctacaacggcgtgcccccggcc
ggagggctcgccggtctcggcggatttcctctcggcgcggctggtctaggagtccgggtc
cagggaaacgcgcaagcatcggccgtgctgcttgtcagcaatctcaatgaggagatggtc
acgcctgacgctctctttaccctgtttggcgtttacggggatgtacagcgtgtgaagatc
ctctacaacaaaaaagactcggcactaatacagatggccgaacctcatcaggcactttta
gcgttaacccacatggacaaattaagagtgtttggaaagcaaattaaagtaatgctgagc
aaacaccaaactgtccaattgccaaaagaaggccagccagacgcgggcctcacgaaagat
tataccaacagcacccttcaccgattcaagaaacccggctcgaaaaattatcagaacatc
tatccgccaagcgcgactctgcatttatcaaacattccgggtacggtagcggaggaagag
atcaaggatgctttcacaaagaatggttttaccgtgaaagccttcaagtttttccctaag
gataggaagatggctctcatacagatgcctaacatggacgatgccgtggctgcgctgatc
aaaatgcacaactaccagcttagcgagtccaaccatctcagagtgtcgttctccaaaagt
aacatctaa
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