Cardiocondyla obscurior: 139102072
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Entry
139102072 CDS
T10704
Symbol
Nup98-96
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139102072 (Nup98-96)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139102072 (Nup98-96)
03036 Chromosome and associated proteins [BR:
cobs03036
]
139102072 (Nup98-96)
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139102072 (Nup98-96)
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139102072 (Nup98-96)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
139102072
NCBI-ProteinID:
XP_070511814
LinkDB
All DBs
Position
LG04:complement(5889550..5899688)
Genome browser
AA seq
1920 aa
AA seq
DB search
MFGQTGNTSFSGFNTATQNSPFGQSAFGKPITTTSFGSGATPVFGSTNTSLFSSKPTGST
TGGLFGNNTTPPAFRQPTSTQPSFGGFGTTNTSTNLFGTQQNTGANLFSTSTGTSAFGQA
NKPGFNFGTTSGTNLFGQPQQNAQQPTPFGQTNATPNTSLFGATTGFGNTNPTTIVGTSV
KFTPVATTDSMSKNGITHSISARHNCIVAMKEYESKSYEELRFEDYQLGKKGPQTGLFGT
TPQTSPFGSTAAGTSTAGTGFGSMTGGFGATSQSGSTGLFGKPITNFGTPATTTTNSFAF
NSTPTTNLFGTNTQTKPFGTAAPTPLFGTNSTNQTAGTGFGTINTGQNTGFGATFGPTQP
NQSIGLFNQNKSAFNIPSTSASTGFTSFGQPATNTTAPLFGNKTTTTGFGTTSTFGPSAP
STFGTNPGFNSGSNAGSSLFNSSFKPAGQTSGFSFGAPPISSTGLGTNTGLNLGSGSSLF
GQQKPGSLFGNPGNNTTFNNSGAFGASTFGTNSNMMSGTGMGLLNGGVTSNQAKANGSVP
VHQQILALVSAPFGDSPLLKNLLPASGKTEELLKPTNPTSKVLNSPQYRVTANNKSPKIK
TRVVSSTQLSKKSLFDGLEEEDPVITEAFQPRPSAKRLVLRPKSATNSSVQSPTENGESM
TRNGTLDDRADTTNVMNNSNSIEVNDKENHSQDNNRLANDRRLSTSWLKSTIPRKSKISD
DELLEGQRSPFSGTNVPDEVNNTVVELRSQSNSSNINHSDPTNSIEMAQNSSFENEKSSA
NLTMQNSESGQETDENSFSMLQSNWNVNAAKITLQRAGYYTIPPLDKLDDFVCGESCVVP
NFTIGRQDYGNVYFPDSFDIYGLNLDEIVHFRHKEVIIYPNDEKKPPVGQGLNRRAQVTL
DKVWPHDKSLHEPITDPQRLAAMNYEGKLRRVSAKHDTRFLEYRPETGSWVFKVDHFSKY
GLSDSDEDDNQIAQTSEAKKLKGFPAPIQKGKPVDPSLTTNKETINGTIANGTLDSTKIG
NNKQHPSVENNFLTKTPLNHFGYSDHSYEERGMIVNPVGETSFGRSSFISGDYSYEKRMT
VSPIGDNARVAGTDSHKLQLMKASFFDVNDEDVNEINNDIFPLVQKTLIRYFPDVTEAKN
DETYNTTSLRATVFPNESLLSTCSPESALYTSSKKSHLPRIGARDKQIIERSIPPPVVRP
VTSVLKYHYEVVPLKESRLNRLRFRCIADAGIYMGRTFRPSWGTGLTLLSLSTQEQATKM
PLQSSFTQLNLYVSGRLADDISSTVIVQRLQILGGDKYDTETQKTFKDSIERHLRIQLDH
CVMNYERDCPTFDVATESANEALQLHCALAQDLAEKEQRPSEDINDEQMQYSSAGEKSFH
RYSSTVWTLCVALWGNYADQDTTDNANEEHYNVVVRREAVGEWLKNVVQKRVEREIKNID
IETKNSHEKIILSLLSACKLEDACQEARKVGDHCLALLMAQLRSGDTVKKFIKQQLALWQ
ETDVDENLTIERLKLFMLVAGEPLISSKHGTINVCEDLDWKRAFAIHLWYLSPPTCSITD
ALDLYEVSFNATEAQAYAAVPEPEYRENEYDAELSNGKRIHDLCFHLLKLYCTGNHDLGE
LLNPLSYTANPLDYRLSWLVQQTLVALGYTHLSDHVAALTHTNFATQLEAHGLWHWAIFV
VLHLRDSVRRRTAVQDLLLRHIEIDDSPEYVAREQFLKEELGISTVWIYQAKAIKSNVNK
RYGEAAWYYIQAKQWTQAHEIIIEHLAADAIINENYEYLKSLLGPLTPIECSGTISGWSH
QGQLLWEYMEITTEIQSLLRSAPDYCGLTYQLEALKPRLTDLCNKIDQFPCLTAKHRLCQ
AEIAKRTLHLARNMLLLHKNEQRSVTKLLVRLISLLPLPEDYAQQELRPIVNMRVAEVMP
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggcaaactggaaacacatcattcagtggatttaacacagcaacacaaaacagt
ccatttggtcaatctgcatttggtaaacccattactacaacaagttttggtagtggtgca
acacctgtttttggtagtaccaatacttcactttttagttctaaacccacaggttctact
acaggtggcttgtttgggaataatacgacaccaccagcatttagacaaccaactagtact
caaccatcttttggaggctttggaacaacaaatacaagtactaatcttttcggcactcag
caaaatacaggggcaaatctttttagtacaagtacagggacttcagcttttgggcaagca
aacaaacctggttttaattttggtacaacatctggaaccaatttatttggacaaccacaa
caaaatgcacaacaacctacaccatttggtcagaccaatgccactccaaacacaagtctt
tttggtgcaaccacaggttttggaaatactaacccgactactatagttggtacttcagtg
aaatttacacctgttgctacaactgattccatgtcaaaaaatggaataacacatagcatc
tcagcccgtcataattgtattgtggctatgaaggaatatgaatctaaatcttatgaggaa
ttacgttttgaagattatcaacttggaaaaaaaggcccacaaacaggactttttggaaca
acaccacaaacatcacctttcggtagcacagcagctggtaccagcacggctgggacagga
tttggatcgatgacaggaggatttggtgccactagtcaatcaggatcgaccggactattc
ggaaaacccattactaattttggaaccccagcaactacaacgaccaacagctttgcattc
aattctacgcccactacaaatctgtttggtactaatactcaaacaaagccatttggtaca
gctgctccgacgccactttttggtactaacagtactaatcaaaccgctggaacaggtttc
ggtaccattaatactggacaaaatacaggattcggagctacatttggtcctacacaacct
aatcagagtattggattatttaatcagaacaaatctgcttttaatattccatcaacgtca
gctagtactggttttacgagctttggtcaaccagccacaaataccaccgcgccattattt
ggtaataaaactaccaccactggatttggaacaacatctacgtttggcccaagtgctcct
tccacatttggaactaatccaggtttcaattctggttctaatgctggatcctcattgttt
aactcgtcgttcaaaccagctggacaaacatcaggattttcttttggagcaccacctata
tcttcaactggacttggcacgaatactggcttaaacttgggcagtggttcttcactgttc
gggcaacaaaaaccaggtagtctcttcggaaatcccggaaacaatacaacatttaacaat
tctggagcgtttggagcttctacttttggaacgaattccaatatgatgtctggaacggga
atgggtttacttaatggaggggtgacatcaaaccaagctaaagcaaatggttcggtacca
gtacatcagcaaatcttggctcttgtttctgcaccattcggcgattcaccgttattgaag
aatcttttaccagcatctggaaaaaccgaagaacttttaaaacctactaatccaacatca
aaagtactaaacagtccacaatatagagttactgctaataataaatctccgaaaattaaa
acaagagtcgttagttctacacagctatctaagaaatccttgtttgatggtctcgaagaa
gaagatcccgtgataaccgaggcttttcaacctcgaccaagtgcaaaacgtttagtatta
cgaccaaagtcagcgacaaattcttctgttcaatctcctacagaaaatggagaatctatg
acgagaaatggtactctagatgaccgagcagatacaacaaatgtaatgaacaacagtaat
agtatcgaagttaatgacaaggaaaatcacagccaagataataatcgacttgcgaacgat
cgacggttatctacatcttggttgaagtccacaattccacgaaaaagtaaaatttccgac
gatgaattgcttgaggggcaacgatcacctttttctggaacgaatgtacccgacgaagtg
aataatacggtggttgaattaagatcgcaaagtaattcatcaaatataaatcattcagat
ccaaccaactcaatcgaaatggcacaaaattcttcttttgaaaatgagaaaagttctgcg
aaccttactatgcaaaattcagaatctggtcaagaaacggatgaaaattcgttttcgatg
ctacaatcaaactggaatgtgaatgcagctaaaattacattacaacgagcaggctattat
accattccaccgcttgataaactagacgattttgtttgcggggagtcatgcgtcgtgccg
aattttaccattggtcgtcaagattatggaaatgtatatttcccggattcatttgacata
tatggtttaaatcttgatgaaatcgtacatttccgtcataaggaggtaattatttaccct
aacgatgagaaaaaaccaccagtgggacaaggcttgaatcgaagagcacaagtcaccttg
gacaaggtgtggccacacgataaatcactacatgaaccaatcactgatccgcagcgactt
gccgcgatgaattatgaaggaaaattgcgtagagtgtccgcaaagcacgacacccgtttc
cttgaatatcgaccggaaactggctcatgggtttttaaagtcgaccatttctctaagtac
ggtcttagcgattcagacgaggatgataatcagatcgcacagacctcggaagcgaaaaaa
ttgaaaggatttcctgcacccatacaaaaaggcaaacctgtcgatccctcattaacgaca
aataaagagacaattaatgggacaatagctaatggaacattagatagtacgaaaattgga
aacaacaagcaacatccgagtgtcgagaataattttttaacgaaaactcctctcaaccat
tttggttacagtgatcatagttacgaagaacgaggaatgattgtcaatccggtcggagag
acttcatttggacgttccagtttcatttctggagattacagttatgaaaaacgaatgacc
gtcagtccaattggcgataacgctcgagtcgctggtacagatagtcacaaattacaactc
atgaaagcgagtttttttgacgtgaacgatgaggacgtaaatgagattaataatgatata
tttcctttggtacaaaaaactctaatacgttatttcccagatgtcacagaagccaaaaac
gatgaaacttataatactacatcattacgagcaactgtttttccaaacgaatcattgctt
tccacctgttctccagaaagcgcgctttatacgtcaagtaaaaaatctcatttgcctcgt
attggcgcgagagataaacagattatcgagagaagtattccgccacccgttgttagaccg
gtaacgagcgtattgaaatatcactatgaagttgtacctcttaaagaatccaggttgaac
agattacgatttcgctgcattgccgacgctggtatatacatgggtagaacgtttcgaccg
agttggggtaccggtctgacactgctatctctgagtacacaagaacaggcgactaaaatg
ccactgcaaagctcttttactcagctgaatctttatgtttccggtcgtctcgctgatgac
atatcgtcaacagtaattgttcaacgtctgcaaattcttggaggtgacaagtacgacacg
gaaacacaaaaaacattcaaagatagcatagaacgtcatttgagaatccaactggatcac
tgcgtgatgaattatgaaagggactgtcccacgtttgatgtagcaaccgaaagcgcgaac
gaagcattgcagctgcattgcgcactggcgcaggatctagcggaaaaagaacaaagaccg
agcgaagatattaatgacgagcagatgcagtacagtagcgcaggcgagaaatcgttccat
cgatactcgagcactgtgtggaccttgtgtgtagcactctggggaaattacgccgaccag
gacacgaccgataacgctaatgaagaacattataatgtcgtggtaagaagggaagccgtg
ggcgagtggctaaaaaacgtggtacagaaaagagttgaacgagaaattaaaaacatcgat
attgaaaccaaaaactcgcatgagaagataatattgtcgttgctgtccgcttgcaagctg
gaggatgcttgtcaggaagcgcggaaggtcggtgatcattgcctggcattattaatggcg
caattacgaagcggcgatacagtaaagaaatttatcaagcaacagctcgcattatggcaa
gagaccgacgtggacgaaaatctcacaattgagcgtctgaagctattcatgttggtggcg
ggcgaaccgctcatctccagcaaacacggtactatcaatgtatgcgaggatttagattgg
aaacgggcttttgctattcatctgtggtacttgtcgccgccaacttgctcgatcactgac
gcattagatctttatgaggtgtcgtttaacgcaacggaggctcaggcgtatgcagcggtt
cctgaacccgagtatagagaaaacgagtacgacgcggagctaagtaacgggaaacggata
cacgatctctgctttcatcttctgaagttgtactgtacgggaaatcacgatctaggcgag
cttctgaatccactgtcttatactgctaatcccttggattatagattgagttggctggta
cagcaaacgctcgtggctttgggctatacacatctctccgatcacgttgccgcattaact
catacgaacttcgcaacgcaattggaagcgcatggactctggcattgggcaatatttgta
gtgctacatctacgagattcagtcagacgacgaactgctgtgcaagacctattgttgcgt
cacatagaaatagacgacagtccagaatatgtagcacgtgaacagtttttaaaggaagag
cttggaatatcgacagtttggatttatcaggctaaggccattaaaagcaatgtcaataaa
aggtatggcgaagcagcttggtactatatccaagcaaaacaatggactcaagcccacgaa
attataatagagcatttggcagctgatgctataataaatgaaaactatgaatatttaaaa
tcactgttaggcccgctgacaccgatcgaatgtagcggcacaattagcggatggtcgcat
caaggacagcttttgtgggagtatatggaaataactactgaaattcagtctctattaagg
tctgctccagattactgtggattaacttatcaactggaagcgctaaagccccgattaacg
gacttatgtaataaaattgatcagtttccatgtttgactgctaaacacagattatgccaa
gctgaaattgcaaaaaggactctacatttggctagaaatatgttgctgttgcacaaaaat
gaacagagatccgtcacaaaattgttggtccgtttaatatctttattaccattaccagaa
gattatgcgcagcaagaattacgacccatcgttaatatgcgtgtagcagaagtaatgcca
taa
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