Cardiocondyla obscurior: 139102131
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Entry
139102131 CDS
T10704
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
139102131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cobs03036
]
139102131
03400 DNA repair and recombination proteins [BR:
cobs03400
]
139102131
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
139102131
DNA repair and recombination proteins [BR:
cobs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
139102131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
AAA_14
Motif
Other DBs
NCBI-GeneID:
139102131
NCBI-ProteinID:
XP_070511934
LinkDB
All DBs
Position
LG04:complement(1027278..1032389)
Genome browser
AA seq
1073 aa
AA seq
DB search
MAERNNECNDNNITSDFNKDAMGDMLSDFPNNLREIVSVKTEDSILQEVSEHIRHTTIKS
NNQCGIQKSDIELNPENAEGTNKEDHRAELQKQVEIGEITPFEAEFKQSTLEQKEGAVNK
SSQLSDLEKYFKQQADLAEQRKKQKKVSKTPSDKDHSLPVKKSKLHSTDAKKNKKHQKSM
YENKDNTVQNIDKANSSIASEINNSSESEYVPSDDEDSDTEDKKSKKRKVSVKSGYTRTK
KTRDDGNNQLFRQRMETNVYPKDEAMHKVDSLFKVPQCIWEKLYRYQKIAVQWFWELHGR
NLGGLLGDEMGLGKTVEVIAFLAGLDCSELLSHNGRYRGLGPTIVICPATLMEQWVKHFH
EWWPFFRVIVLHHSGGYNGDPESLIESLQTGGILITSYNGVLKHKDLLVSSQWDYVILDE
GHKIRNPQAKVSRLVKKFSTPHRLLLSGSPLQNSLKELWSLFDFILPGKLGTLPAFLEHC
AAPITRGGYANATPLQEATALQIATMLKDTIKPFMLRRTKTDVKHHLTLPEKNEQVLFCS
LTDEQTKIYKKYLCSDDVSFVLHERNTYRDSGKYRARFLIALSALRKICNHPDLFLYTRE
LDSDEDIDLSEKHLQKFGYWKRAGKMTVVRSLLNIWQKQGHRVLLFTQGRQMMHILESLL
QHEKYTYLRMDGTTPMSQRHQTINKFNNDESYFVFLLTTRVGGLGVNLTGANRVIIYDPD
WNPATDAQARERAWRIGQNKQVTIYRLITAGTIEEKIYHRQIFKLLLSNKVLNDPRQRRL
FKTTDLVELFNLNEPINGESSESDRLFRESKLTPDIPGRFSRSKIEQMKKLASTLSKKIS
ASVKSKRNENENASDSTCEGNHDEQTNNSKPEFESVATKNSSLVNESLPPDQDNTQKLSE
CNEDFNMNSDAIVEKSSSIENKNIFKKDNCEQNVTSVKSLNNNSVEKESQLNLKSDKIEL
SSRKSKKYKKHSYSGKTNVSAIFEGERVPCLIGRRLGRSGEKEESVSTADDDYVLRKLFA
KSSVSSAFQHETVLSNVYHNNDNENMMQRFARESAQESMDFVHQSGKYCWRPA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcagagagaaataacgagtgtaacgataacaatattacgtcagattttaataaagac
gcaatgggagatatgttgagtgactttccaaataatctgcgagagatagtatcggttaaa
acagaagatagtattttgcaagaagtatcagaacatatcaggcatactacaattaagtca
aataatcagtgtggcatacaaaaaagtgatattgaactgaatcctgaaaatgctgaaggt
actaacaaggaggatcatcgagcagagttgcaaaaacaggttgaaattggagaaattact
ccatttgaagcagaattcaagcagtctactttggaacaaaaagaaggggctgtcaataag
agttctcaattatcagatcttgaaaagtattttaaacaacaagctgatcttgctgaacaa
agaaaaaaacagaagaaagtatctaagacaccttctgataaagatcattcactacctgta
aaaaaatcaaaattacatagtactgatgcaaaaaagaataaaaaacaccaaaagtctatg
tatgaaaataaagataatactgtacaaaatatagacaaagcaaattccagtatagcaagt
gaaattaataatagttcagaaagtgaatatgttccaagtgatgatgaagattctgataca
gaagacaagaaatctaaaaaaagaaaagtgtcagttaaatcagggtatactcgcacaaaa
aaaactcgagatgacggaaataatcagttattcagacagagaatggaaacaaacgtttat
cctaaagacgaagcaatgcacaaagtcgattctctctttaaagtaccacaatgtatttgg
gaaaagttatatagatatcagaagatcgcagttcaatggttttgggaattacatggtcgg
aatttaggtggccttttaggtgatgaaatgggattaggaaaaactgtggaagttattgca
tttcttgctggtttagattgtagcgaattactttctcataacggaagatacagagggttg
ggtcccactatagttatatgtcctgctactttaatggagcaatgggtaaaacattttcac
gaatggtggccattttttagagttattgtacttcatcattctggtggttacaacggtgat
ccagaaagtttaatagaatctttacaaactggtgggatacttattacttcttataacgga
gttcttaaacataaagatttgcttgtgtctagtcaatgggactatgttatcctagacgaa
gggcataagattcgtaatccacaagcaaaggtgagccgtctggtaaagaaattctcaaca
ccacatcgattgttgttaagtggaagtccattgcaaaattctttaaaggaactttggtct
ttgtttgattttattttgcctggcaaactaggcactctacctgcatttttagaacattgc
gctgctcctataacacgcggagggtacgcaaatgctacgccacttcaagaagcaacagct
cttcaaatagccactatgctaaaagatactattaagccatttatgcttcgaagaacgaag
accgatgtgaagcatcatctcactctaccagagaaaaatgaacaggtattattctgcagt
ttaacggacgagcaaacaaaaatatataaaaaatatctgtgttcagatgatgtatccttt
gtccttcacgagagaaatacttatcgcgatagtggaaaatatagggcaaggtttcttatt
gccttgtcagcattgagaaagatatgcaatcatccggacttatttttgtataccagagaa
ctagattctgatgaagatatcgacttgtccgagaaacatctacaaaaattcggttactgg
aaacgtgctggaaaaatgactgtggttcggtctcttctgaacatttggcaaaagcaaggg
catagagtgttgctttttactcaaggaagacagatgatgcacattttggagtctcttttg
caacatgaaaaatatacttacttgagaatggatggaacaacaccaatgtctcaacgacat
caaacaattaacaaatttaataatgatgagtcgtatttcgtgttcttgctgacaacgcgc
gtaggaggcctaggagtaaatctaaccggtgcgaatcgagtgattatttacgatccggat
tggaatccagccacggacgcccaagcgagagaacgcgcgtggagaataggacagaataaa
caagttactatttatagattaattaccgctggtacgatagaagaaaagatatatcacaga
cagattttcaaattgctactttcaaataaagttcttaacgatccccgccaacgacgtcta
tttaaaacaacggatttggtagagctgttcaatttgaatgaaccgataaatggcgagtct
tctgaatcggatcgtttatttagagaatctaaattgacacctgatattcctggtaggttt
tctcgcagcaaaattgaacagatgaaaaaattagcgtcaactctcagtaaaaagataagt
gctagtgttaaatcgaaacgtaatgaaaatgaaaacgcaagtgacagcacttgcgaagga
aatcacgacgaacaaactaataattcgaaacccgaatttgaatctgtcgctacaaagaat
agttcgcttgtaaatgaaagtttgccacctgatcaagacaatacacaaaaattgagtgaa
tgcaatgaagattttaatatgaattctgatgcaattgttgagaaaagcagcagtatagaa
aataaaaatatatttaaaaaggacaattgtgaacaaaatgtaacttctgtgaaatcttta
aacaataattctgtagaaaaagaaagccaacttaatttaaaatctgataaaattgaatta
tcatctcgtaaaagcaagaaatacaaaaaacactcgtattctggcaagacaaatgtttct
gcgatatttgaaggagaacgtgttccttgtttgatcggtcgtcgtttaggacgttctggt
gaaaaggaagaatcggtttcaaccgcagatgacgattatgtcttgaggaagttattcgct
aaatcatctgttagttcagctttccaacacgaaacagtattatcaaatgtgtatcataat
aacgataatgagaacatgatgcaacgtttcgcacgagaatcggcacaagaaagtatggat
tttgttcatcaatcgggaaaatattgttggagaccagcatag
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