Cardiocondyla obscurior: 139102137
Help
Entry
139102137 CDS
T10704
Symbol
Strump
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139102137 (Strump)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139102137 (Strump)
Membrane trafficking [BR:
cobs04131
]
Protein recycling
Others
WASH complex
139102137 (Strump)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
RecQ-1-like_HTH
Motif
Other DBs
NCBI-GeneID:
139102137
NCBI-ProteinID:
XP_070511943
LinkDB
All DBs
Position
LG04:955560..960524
Genome browser
AA seq
1145 aa
AA seq
DB search
MSDFLAANNVCGQNLLRLVSRGNAIIAELMRLKDYVPPVFSLDSKQLIQKYGSIIIDFAY
FKAASVYEQKIEDDSILQETDEELRNNFSDLLTRFYLAFESIHKYVTDLNFYIDELGDGV
YIHQSLDSIMFNEEGKQLMCEAVYLYGVMLLLVDYHFEGRIRERLLVSYYRYNAQRSSST
RVDDVCMLLRSTGYVRTSTKRLTNYPEEYFKRVPLRDFLVDLVVGRLRSDEIYNQTLAFP
HPEHRSTAVATQASMLVIILSFKPTILHTQTAIMRETVDRFFPDNWVISIYMGTVINLCD
WWTPYKAARTALNNTLENSNVKGIAQKYGTKMDKLMQEIEEIQLAGTMDENTTGSLVKLV
RECNVTLHWILLHTTTPTITLEDSKRSRTLRQLVVVESKYTTVKCLRLLLSTAQIEQDVK
QMYKDLLLGKETKWLKDKNICVERIIDLAQIFGGDKPLDGIDKNQNLYAWFMEISKHIDS
LKQEDGRKIVQLLQALEQVQEFHQLENNLHISQYLADTRETLHNMLRTGSISEDVMISLN
IVTDCCYAWNIMESFIDVMQASIKGNPPTVIKLKALFLKMASALETPLLRVNQARSADLS
SVSQYYSRELEGYARRVLQIIPETVFGLLAEIVHLETNSFKEIPTKLPKDKLKDYAQLAE
RLQMAKLTYAVSVFTKGVLSLRSVSLGVLRVDSHRLLEDGIRQELVKKVTLALQNGLNFD
QKSKISLLQKLNNLSSIMDGYRKSFQYIQDYININSLKIWHEEITYIINNAVEEERRGSF
WIPGKSWRQFQEDKHAFSTDNNSLTFMGRLARELIRITDPRTTVYIEHSLTWYDIKTQNE
ILNYKVFSVILETIGTPGLSGLDKLVSFFIVVELEALVHYIEKSIRNKTWTSLLEDCDTT
LSSLDNAKGNISKLHNSISASSSKLWSSALEWTLKIGHYQLLRKKIAYELNTACKFEAKH
MEAALRTLNTAILCEITKKDSNNETKPEKTELLHELSMRLDWAGISDPHNKVYIKPPKID
NIAVIIFLFTVSQLNKLFYCKNTASLLSKRYQDPVDAVVFAIGIQTILRQFHVSVMNRYV
KYLCMYVLSFVTVESMKAGGDAETEGATNLHFLELFVKYSGIPRSLILKEIPAVVLDHAL
VKMIK
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattttttggcggccaataatgtttgcgggcaaaacctgctgcggctggtatct
cgcgggaatgctatcatagccgaactaatgcgactgaaggactacgtaccgccggtcttc
agcttggattcgaaacaattgatacagaagtatggatctatcataattgactttgcatac
tttaaagcagccagtgtttatgagcaaaaaatagaagatgattcaatacttcaagaaact
gatgaagagcttagaaataatttttcagacctcctcacaaggttttatttggcttttgaa
agtatacacaaatatgtcacagacctaaatttttacattgatgagttaggagatggagtt
tatatacatcagtcactagactccattatgtttaatgaggaaggaaaacaattaatgtgt
gaagctgtatacttgtatggtgtcatgctgttgttggttgattaccattttgagggacgc
atacgtgaaagattacttgtctcttactatcgatataatgctcagaggtcttcctcaact
agagtggacgatgtttgtatgctgcttcgttcaacaggctatgttagaacgtcgactaaa
agactaactaattatcctgaagaatattttaagagagtaccgttgcgagattttttggta
gatctcgttgttggtcgattgcgttctgacgagatttacaatcaaactcttgcttttcca
catccagagcatcgtagcaccgctgtggctactcaagcatcaatgctagttataattttg
tcatttaaaccgaccatattgcatacacaaactgctattatgcgagaaactgtagacaga
ttctttcccgataattgggtaattagtatttatatgggaacagtaattaatctgtgtgat
tggtggacaccatataaagctgcacggaccgcattgaataatacacttgaaaattcaaac
gtaaaaggaattgcgcaaaaatacggaacaaaaatggataaattaatgcaagaaattgaa
gagatacagctggcaggtacaatggatgaaaatacgacaggttctttagttaaattagta
agagaatgcaatgttacattacattggattcttctacatactactacgcctacgataacg
ttagaggattcaaaacgttcgcgtactctacgtcaattggttgtagtggaaagcaagtat
accacagtaaaatgtcttcgtttattgttaagcactgctcaaatagaacaagacgttaag
cagatgtataaagatctcttgcttggaaaagaaactaaatggctgaaagacaaaaatata
tgcgtcgaacgtataattgatctcgcacaaatctttggcggtgataaaccactagatggt
attgataaaaaccaaaatctttatgcgtggtttatggaaataagtaagcacattgattca
ttaaagcaagaagacgggcgaaaaatagtacaactattacaagcattggaacaagttcaa
gaatttcatcaattagaaaataatttacatatttcacaatatctcgctgacacacgtgag
actctacataatatgttgcgcacaggcagcatatctgaagacgttatgataagtttaaat
attgtaactgattgttgttacgcgtggaatattatggagtcctttatcgatgttatgcaa
gcgagtataaagggaaatccaccgactgttatcaaattaaaagctctttttcttaaaatg
gcatcggcattagaaactccattgctgagggtaaaccaagcgcgaagcgcggacttgtct
tcggtatcccaatattacagtagagaactagaaggatatgcaagacgcgttttgcaaatt
atacctgaaacggtgtttggtttattagcagagatagtacacctcgaaacgaattcattt
aaggagattccgactaaattacccaaagacaaacttaaagattatgctcaattggctgag
agattacagatggcgaaattaacgtatgccgtgtcagtctttacaaagggtgttttatct
ttaagaagtgtttcgttaggagttctaagagttgattcacatcgtcttttggaggatggt
atacgccaggagcttgtcaagaaagttactttggctttacagaatggccttaattttgat
caaaaatctaagatatctcttctgcaaaaactgaataatttatcttcaattatggacgga
tatagaaaatctttccaatacattcaagattatattaacataaacagtttgaagatttgg
cacgaagaaattacgtatattataaataatgcggtcgaggaagaacgtagaggctctttc
tggataccagggaaatcgtggagacaatttcaagaagataagcatgcgttttcaacggat
aataattccttgacgtttatgggtagacttgccagagagcttattcgcattaccgatccc
cgaactaccgtgtacatagagcattctttaacgtggtatgatattaaaacacaaaacgag
atcttaaattacaaagttttctcggtaatattagaaacaataggcaccccaggattgtca
gggctggataaacttgtttcttttttcattgttgtggaactggaggctttggttcactac
atagaaaaaagcatacgcaacaaaacgtggacgtcactattagaagattgtgacactact
ttgagttctttagataatgctaaaggtaacatttcgaagcttcacaattctataagcgct
agcagtagtaaactgtggtcgtcggcactcgaatggacattaaaaataggccactatcaa
ttactcagaaaaaaaatagcgtatgaactaaacactgcctgtaaatttgaagcaaaacat
atggaagctgcacttcgaacactgaatacggctattttatgcgagatcacgaaaaaagat
agtaataatgaaacgaaaccagagaaaaccgaattacttcacgaacttagcatgcgatta
gattgggctggcatcagtgatccgcataataaagtttatattaaaccaccaaaaatagat
aatatagctgttattattttcttgttcacagtatcgcaattaaataaattattctactgt
aaaaatacagcaagtttgttgagcaaaagatatcaggatcctgttgatgctgtggtattt
gcaataggaatacaaacgattcttcgtcaattccacgtttccgtgatgaatcgttatgtg
aaatatctatgcatgtatgttctgtcgtttgtcactgtggaaagtatgaaagcgggaggt
gatgcagaaactgaaggagctaccaatctccatttcttagagctttttgtgaaatattct
ggcattccacgttctctcattcttaaagaaatacctgccgtcgttttagaccatgctcta
gtcaaaatgataaaataa
DBGET
integrated database retrieval system
