Cardiocondyla obscurior: 139102152
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Entry
139102152 CDS
T10704
Symbol
Smn
Name
(RefSeq) survival motor neuron protein isoform X1
KO
K13129
survival motor neuron protein
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cobs03041
]
139102152 (Smn)
Spliceosome [BR:
cobs03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
139102152 (Smn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMN_YG-box
SMN_G2-BD
SMN_Tudor
TUDOR
DUF6265
Tudor_2
Cofac_haem_bdg
Motif
Other DBs
NCBI-GeneID:
139102152
NCBI-ProteinID:
XP_070511969
LinkDB
All DBs
Position
LG04:complement(826820..829640)
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AA seq
311 aa
AA seq
DB search
MQANRVVTLTTRSFTLWPRETLCICTYARKPRFRVGLSAIKFSDFSLHLHIVRRKQQLGV
GVLTIEHYRGITINNRESEDVWDDTALIKAYDRAVNFAKEEVAKRIAMDTQNQQTRQISQ
NSKYLNQPKKKWTVGAPCRAVYSADGQVYEAIVSSIHQNSGMCTVKFVGYQNIEKVEMNS
LIESEGLQSQIAQHKDALAHKANDKVVDSDASAYSNQQDSNQVNGERMDYDVENPKLFKN
NLMPGIEDFNPTLNAMPPAPPLPPLMAKLPETDADALSSMLMSWYLSGFHTGYYHGLKQA
KINQQKRKNCQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccaatcgcgtggtaaccttgacgactcggagtttcacattgtggccgcgtgag
accctctgtatctgtacatacgcgcggaagccgcgattccgagttgggctctctgctata
aagttctcagatttctcactccacctccacatcgttcgcaggaaacaacaattgggtgtt
ggtgtattgactattgagcactatcgaggaataacaataaacaatagagagagtgaagat
gtttgggatgatacagccttgataaaagcatacgatagagctgtaaactttgccaaagaa
gaagtagcaaaacgtattgccatggatactcaaaatcagcagacaagacagatctcacag
aattctaaatatttaaatcaaccaaaaaagaaatggactgttggtgccccatgtcgtgct
gtatattctgcagatggacaagtatatgaagccattgtatcaagtattcatcaaaattct
ggcatgtgtactgtgaaatttgttggatatcaaaatatagaaaaagtagagatgaattct
cttatagaatcagaaggactgcaaagtcaaattgcccaacataaggatgcattggcacac
aaggctaatgataaagttgtagattctgatgcatccgcctattctaatcagcaggattcc
aaccaagtaaatggtgaaagaatggattatgacgtagagaaccctaaattatttaaaaat
aatcttatgcctggaattgaggattttaatccaacattaaatgcaatgccacctgcaccg
cctttaccaccactaatggctaagttgcctgaaactgatgcagatgcgttatctagtatg
ttgatgtcatggtatctaagtggattccacacaggttattatcatggattaaaacaggct
aaaattaatcaacagaaaagaaaaaactgtcagtag
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integrated database retrieval system
