Cardiocondyla obscurior: 139102185
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Entry
139102185 CDS
T10704
Name
(RefSeq) collagen alpha-1(III) chain-like
Organism
cobs Cardiocondyla obscurior
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_14
Motif
Other DBs
NCBI-GeneID:
139102185
NCBI-ProteinID:
XP_070512011
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Position
LG04:6386955..6393222
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AA seq
718 aa
AA seq
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MRLHLLWIVLLAVTRTALADEEGYSYPRPTNQLTPGTSNGGAKPGGFPGTTGGYPAPGGP
QGSGTPGGQPGRPNGYPTGPSGFPGRPGGFPGETQPNFPSSQGPSNGYPRERPSVPFPGG
EPAGRPGKNGQSGPSGRPGEFPTGPNGGYPSSRPGGQTSNGFPGTQRPGYPSGPEQGKPE
GYPSGRPSGQESNGRYPSGQAPGGYPGETQKPSGPGSGYPSSRPGGGYPGGTQKPGGGSA
PGGYPGAPGGQQGGTSTNGYPSTRPETQKPGGYPSGPETQRPGYPSGPRGPETIPSGPGP
QGPGFPSGPGPQGPGGFPGGPGPQGPGFPSEPGPQGPGGTGHAISPGGPGEYTHEDDGTY
NEGDYSAIPGEPGRDYPIYSEIPETSFRCDAQQFPGYYADVDAQCQVFHICANNRTFDFL
CPNGTIFHQQFFVCVWWNQFDCSSAPSLFYLNENIYDYTIMGASSQGPSGPSRPSGPSGP
SGSAGTYPGGPGGTSGSSYPGGSQRPSGPSYPGEGPQGPSGPTGYPGGPQGPPGPNGYPG
GPQGPSGSNGYPGGPQGTSGSQGPSGPSYPSGSQGPSGPSSFPGRPGVPSGPGPQFPSGR
PSPGYLSPSSGPSGFQPGFQDNYIPTMKRPELPGEDSTTSVYTGQSERPSGPQGPSGPGR
PQGPNGINGYPSGRPSGPSFPSGPSGPNGIPGKPDTGSPFPPQGPAKPDREYLPPRLE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcggctacacttactatggatcgtcctgctggctgtcactcgtacggctttggctgac
gaggaaggatatagttatcctcggccgacaaatcaacttactccgggtacttcaaatgga
ggtgcaaaaccgggaggatttccaggtactactggtggatatccagcccctggaggtcct
caaggttctggaactccgggtggacaacccggaagaccgaatggttacccaacaggtccg
tcaggttttccaggacgcccgggcggctttccaggtgaaacgcagcctaattttccatcg
agccaaggaccttctaatggatatcctagagaacggccgtcagttccgtttccaggcggt
gaaccagcaggaaggccaggaaaaaatggacaaagcggaccaagcggccgcccaggagag
tttccaaccgggccaaatggtggatatcccagcagcagacctggtggacaaacgtctaac
gggtttccaggtacacaaaggcccggatatccgagcggacccgagcaaggaaaaccagaa
ggatatcctagcggccgaccgagtggacaagaatcaaatggaagatatcctagcggacaa
gctcctggcggttaccccggtgaaacacagaagcctagcggtccaggaagtggatatcct
agtagtagaccaggaggtggatatcctggaggcactcaaaaacctggtggtggttcagct
cctggcggatatcccggagctcctggaggtcagcaaggtggaacatctaccaacggctat
cctagcactagaccagaaacacaaaaacctggaggctatccaagcggaccagaaacacaa
aggccaggatatccgagtggtcctcgaggaccagaaacaattccaagtggcccaggcccg
caagggccaggatttccgagcggaccaggaccgcaaggaccaggaggatttccaggaggg
ccaggcccgcaagggccaggatttccaagcgaaccaggaccgcaagggccaggaggtact
ggacatgcgataagtcctggcggacctggggaatacacgcatgaagatgacggaacatat
aacgaaggcgattattcagctattcctggcgagcctggtcgcgattatcctatatatagt
gaaattccagaaaccagttttcgttgcgacgcgcaacaatttcctggttattatgccgac
gtcgatgctcagtgccaagtttttcacatatgtgccaataatagaactttcgattttctt
tgtccgaacggaacaattttccatcagcaatttttcgtttgtgtatggtggaatcaattc
gattgcagctctgcaccaagcctgttttatttaaatgaaaatatttatgattatactata
atgggagcatcatctcaaggaccttcgggaccttcaagaccttcagggccttccggacct
tcgggatctgctggtacttatccaggtggccctggcggaacaagcggctcaagttaccca
ggaggttcacaacgtcctagcggtccgagttatcctggagaaggacctcaaggtccgtcg
ggaccaactggatatccagggggcccacaaggtccgccgggaccaaatggatatccagga
ggaccacaaggtccgtcaggatcaaatggatatccgggaggtcctcagggtacatcaggt
tctcaaggtccatcgggaccaagttatccgagcggctctcaaggaccatctggcccaagc
agttttcctggacgaccaggagttccatctggaccgggaccgcaatttccatctggccga
ccaagccccgggtatttaagtccatcgtcaggaccgtccggatttcaaccaggttttcaa
gataattatataccaacgatgaaaagacctgaacttcctggtgaagattcaacaacttct
gtatatacaggtcaatctgaaaggccatctggtcctcaaggaccaagcggcccgggtcgt
ccacaaggacctaacggaataaacggatatcctagcggtagaccgagcggcccatcgttt
ccgagtggaccttctggtccaaatggcatccccggaaaacccgacacgggttcgccattc
cccccgcaagggcctgcgaaaccagatcgtgagtatttgccgccgcgactggaataa
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