Cardiocondyla obscurior: 139102329
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Entry
139102329 CDS
T10704
Symbol
Grd
Name
(RefSeq) GABA-gated ion channel
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04080
Neuroactive ligand-receptor interaction
cobs04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139102329 (Grd)
04082 Neuroactive ligand signaling
139102329 (Grd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cobs04040
]
139102329 (Grd)
Ion channels [BR:
cobs04040
]
Ligand-gated channels
GABA-A
139102329 (Grd)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
MFMR_assoc
Motif
Other DBs
NCBI-GeneID:
139102329
NCBI-ProteinID:
XP_070512267
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Position
LG04:2289509..2297253
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AA seq
514 aa
AA seq
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MNKFLYEGSKNTTYEATITRTAVLVVFAKLITSTFLEVNADARVSIKTQSNNHSNISDLL
DNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDRRLAFQG
SNMKTLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQNGSVLYSSRLTIKAG
CPMNLEDFPMDTQRCPLQFGSFGYTTRDVIYKWNSARQVAIAEDMKLSQFDLVASPTANH
STAPGFSQAEYSMLLVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSLG
ITTVLTMTFLGLEARTDLPKVSYPTALDFFVFLSFAFIFATIIQFAVVHYFTKYGSGECY
FSSDLSDTESSNDEEDVTRRIIKNQTTRRKSSASSARGRGNFAINGDSVIEVIPLSAISL
PDRDPAISEHWQISCVTCSPPPRQMPPPPPPSRRATSSASQRRRRRAPRFNSVSKIDRIS
RVMFPLFFLTINLFYWYAYLSRSERIHYYNSNNA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaattcttatacgaaggaagcaagaatacgacttatgaagctaccatcacgagg
acagcagttctggtcgtctttgccaagctcattacgtcgacctttttagaggtcaacgcg
gatgcaagggtttccattaagacccagagcaacaatcacagcaatattagcgatctatta
gataatctacttcggggttacgacaatagcgttagaccagactttggcgggcccccagcc
accgtcgaggtcgatattatggtccgcagcatgggtcctatctctgaagtggatatgacg
tactccatggattgttactttcgacagtcgtgggtcgatagacgtttagcgtttcaagga
agtaatatgaagacactcgctctgagcatttctatgttggcacggatctggaagcccgat
acttacttctacaatggcaagcatagttacttgcatacgatcactagcccgaataaattc
gtcagactttatcaaaatggcagcgtgctttacagctccagacttacgattaaagcggga
tgtccgatgaatctcgaagattttccaatggacacccagagatgtccattgcaattcggc
agttttggctacacgacacgcgatgtaatctacaagtggaacagtgcaagacaggtcgca
atagcagaagacatgaagctgtcacagtttgatctggtcgctagtcccaccgcaaatcat
tcaactgcgccaggtttctcacaggcggaatactcgatgctcttggtgtacttccacttg
caaaggcatatgggtaacttcttaatacaagtttacggcccttgcgttctgctagtcgtc
ttatcatgggtttcattttggttaaacagagaagctactgccgatcgagtatcgttaggt
ataactactgtgttaacaatgacattcttaggactcgaggcgagaaccgatttgcctaaa
gtttcctatccaaccgctctggatttcttcgtttttctgtcattcgcgtttatcttcgct
actataatacaatttgcagtggtgcattatttcaccaaatacggatcgggcgaatgttac
ttcagctccgacctaagcgacaccgagagctcaaacgatgaagaagacgtaaccagaagg
ataataaaaaatcaaacgactcgtcgaaagagctcagcgagttccgcacggggacgcggg
aacttcgcaataaacggcgacagcgtgatcgaagtaataccattgtcggcgatttcattg
cccgacagagatccagcgatatcggaacactggcaaatatcttgtgttacctgcagcccg
ccgccgaggcaaatgccgccgccgccaccaccgtccagaagagcaacgtcgtccgcgtct
caaagacgacgtcgacgagcacctagattcaactcggtctcgaagatcgaccgtatcagt
cgcgtgatgttccctttgttctttctgactatcaatctcttctactggtatgcgtatctc
tcgcgcagcgaacggattcactattataattccaacaatgcgtga
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