Cardiocondyla obscurior: 139102496
Help
Entry
139102496 CDS
T10704
Symbol
Col4a1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04382
Cornified envelope formation
cobs04512
ECM-receptor interaction
cobs04518
Integrin signaling
cobs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139102496 (Col4a1)
04518 Integrin signaling
139102496 (Col4a1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139102496 (Col4a1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139102496 (Col4a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cobs04147
]
139102496 (Col4a1)
00536 Glycosaminoglycan binding proteins [BR:
cobs00536
]
139102496 (Col4a1)
Exosome [BR:
cobs04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
139102496 (Col4a1)
Glycosaminoglycan binding proteins [BR:
cobs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139102496 (Col4a1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
139102496
NCBI-ProteinID:
XP_070512512
LinkDB
All DBs
AA seq
1951 aa
AA seq
DB search
MTRLGLRFVASTVFLAGIVSGQYNNYTWQNPPPVVPLNEDRGDIGRPTNDSDDDYGSSPG
WKYLNKGFIVDNEGYEDPERRNGSFASNHYTPDERTRQWWGAQRTRNNPHDRPSYDREIY
NRYPDSGGAPGSGIDENRSSGYPDGRGDYDIYSGGVENERRGGSYNYNRGNTGDSYSGSY
GESYGAESYNRGNGNRGNTYGDSRGRSHGGYAAAGDDENYPSNYQVVPMPGASGNCTGSG
CCVPKCFAEKGSRGPPGVLGHQGPKGQRGFPGTEGLLGPKGEKGDPGPQGPHGAKGDRGK
MGMPGFPGINGVPGLQGGPGSPGLPGRDGCNGTDGERGRDGVPGEPGPRGFRGGPGPKGE
KGQPAYAGSFTEGQKGEPGIDGVRGPPGPPGFQGDRGLPGPKGEQGPYGTPGVQGPKGEK
GNMGLGFEGLKGDKGQKGEQGPPGSSGPVEPFIGIKDITGPPGEPGLKGDKGDFGPEGQK
GEPGFIGDHGIPGGLGQKGEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGIDGLEGLGGRP
GKKGEPGRDGSMGVPGLRGPPGPPGGGKGRPGPPGPKGPRGFPGPTGPRGSDGFPGDPGP
RGPIGLQGGPGLSGIPGPEGLPGDKGAKGEPGLTGFPGGPGPRGFDGPPGPAGPRGPQGE
KGFSITGPKGVDGSPGSDGEKGQKGERGYVGVRGRPGDSLDGIPGAPGAPGEAGEPGAPG
RDGNPGFPGQPGEKGDIGGRCIDCLPGLRGAKGERGLDGIPGLTGPRGPPGERGFPGEPG
LDGLPGAIGPPGIPGKDGIPGSSGPQGEPGTPATVTRNMLKLEKGEKGARGEIGRQGPPG
PEGPAGEKGRPGFEGFPGLKGTPGDRGFPGQDGVPGRPGTPGRRGEKGVSIKGEPGEAGR
SGHPGQKGEPGEYGEKGDSGECPINLTKAFKGDRGLTGDKGEPGPPGRDGYPGDKGLQGF
SGQPGLPGPIGAPGPVGPRGLPGPRGDKGNMGPMGFPGEPGREGPRGFPGAPAPKGDKGE
PGVSVKGSPGLRGPQGEKGEKGLPGPPGKEGMPGYQGLPGFVGEKGDIGPPGINGLPGAP
GEKGDTGPIGPPGPSGVAGIPGVDGSKGEPGLPGEGGRPGLPGFPGAKGDRGEPGIDGLK
GYPGRRGIPGSPGRPGADGAPGIKGEFGEKGSPGFPGLPGMEGKPGRPGISGLKGDQGPP
GTPGLPGLIGYEGIKGDIGPPGPLGRKGEPGQVSEKGQKGEPGMPGIRGPPGPSGRDGVD
GLKGETGRPGFGRDGLPGLKGEPGVPGRDGAPGFQGQKGDTGVRGFPGIKGDYGLPGIPG
EPGPPGIDGLPGEIGDIGPHGAPGFPGLNGEMGLPGRPGLDGVKGERGSPGLVGLPGITG
IIGEKGDRGPPGPTIQIKGEKGEPGIPGRPGDKGDKGDQGVIGIPGYDGEKGDRGLPGLE
GLPGPHGAPGLKGELGSPGISGVPGITVKGEKGLPGLMGKHGRDGFSGRPGEKGEPGLPG
LPGPKGDIGPYGPLGPQGEKGDQGLPGLTGSPGRDGAPGLEGAPGLPGERGSKGDQGLPG
LYGAPGAKGEPGLRGPSGLDGPSGEKGERGWDGVNGLPGPVGEKGDRGYPGPVGSMGIVG
YVGQKGDKGDDCLEPPMGPKGDRGYPGAVGPPGPPGEKGLSGPPGFPGLDGIKGAQGYIG
PAGPPGLPGLPGPVGGPGLPGLQGPIGAPGLIGEPGAPCETTPDYLTGILLVKHSQSSSV
PYCDAGHIKLWEGYSLLYTDGDERAHSQDLGYAGSCVRKFSTIPFLFCDVNDVCHYASRN
DRSYWLSTNNPIPMMPVEETAIEGYISRCVVCEVPANVIAVHSQSISIPECPNGWTGLWI
GYSFVMHTGAGSQGGGQSLSSPGSCLEDFRATPFIECNGAKGHCHYYSNQYSFWMVTIEE
ALQFRNPEKQTLKAGSLRSRISRCQVCIKNT
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccacagttttcctggccgggattgttagt
gggcaatataataattacacatggcagaatccgccgccggtcgtgccactgaacgaggat
cgaggtgatatcggaaggcctacaaacgacagcgatgacgactacggcagttcgccagga
tggaaatatttaaacaaagggtttatcgtggacaacgaaggatacgaggatccggaaagg
cggaacggcagtttcgcaagtaatcattatactcctgatgaaaggactcgacaatggtgg
ggagctcagagaactagaaacaaccctcatgatcgaccttcttacgatcgagagatttac
aacaggtatcccgatagcggaggcgcgccaggatccggaattgatgaaaaccgatcaagc
ggttatcccgacggtcgcggcgattacgacatatacagcggtggcgttgaaaatgaacga
agaggaggttcttacaattacaatcgaggaaataccggtgattcgtacagcggtagttac
ggagaaagttatggcgcggaatcttataatcgtggaaacggaaatcgcggaaacacttat
ggtgacagtcgtgggcgcagtcatggtggctatgctgccgctggagatgacgagaattat
ccaagcaattatcaagtggtgccgatgcccggtgcatcgggaaactgcaccggatcggga
tgctgcgtaccgaaatgcttcgccgagaagggatcgcggggaccaccgggagtactcgga
catcaaggccctaaaggacaacgtggatttccgggaacagaaggtcttttaggaccgaaa
ggtgaaaaaggagatcccggtcctcaaggcccgcacggcgctaaaggtgacagaggaaaa
atgggcatgcctggttttcctggcattaacggcgtgcctggattacaaggaggtccaggt
tctccaggcttgcccggtcgtgatggttgcaacggaacggacggtgaacgtggtcgcgac
ggtgtacctggggagccaggacctcgcggttttcgaggtgggcctggacctaagggagaa
aagggtcaaccggcgtacgctggttcttttacggaaggtcaaaaaggcgagccagggatt
gacggtgtgagaggacctcccggccctcccggttttcagggagatcgcggtttgcctggc
ccgaagggtgaacaaggtccctatggtactcctggcgtacaaggtccgaaaggagaaaaa
ggtaacatgggtcttggatttgaaggattaaagggagacaaaggtcaaaagggtgaacag
ggaccgccggggtcgagtggccctgtagaaccattcataggaatcaaggatataacgggt
ccgcccggagaaccaggcctgaaaggagataaaggtgattttggaccggaaggacaaaaa
ggagaaccaggattcataggcgatcacggtatacccggaggattaggccaaaaaggagaa
aaaggccttccaggcgctccaggcattcgtggtagagatggtttctctggtcctcccgga
ccgcctggacgaaaaggcgatcgaggtattgacggattagagggacttggtggacgaccc
ggtaaaaaaggagaacctggacgagatggttcaatgggtgttcctggtttacgaggacct
cctggaccgccaggaggcggtaaaggaagaccggggccaccaggtccgaaaggaccacga
ggatttcccggacccacaggaccgagaggatcagacggttttccgggagatccgggacca
agagggcctataggcttacaaggaggtcccggtttatctggaattccaggtccagaaggt
ttgccaggagacaaaggtgcaaaaggtgaacctggattaacaggatttcctggaggtccg
ggcccacgaggattcgacgggccacccggaccggcaggacctcgaggaccgcaaggagaa
aaaggattttcaataacgggaccgaaaggtgtcgacggatcgcccggttcggacggagag
aaaggtcaaaagggtgaacgaggttacgtgggcgttcgaggtcgaccgggtgattctctc
gacggtattccgggagctccgggtgctcccggagaggccggggaacccggagcaccagga
agagacggcaatccaggctttcccgggcagcctggagaaaaaggagatattggcggtcgt
tgtatagattgtttaccgggattgagaggcgctaaaggagaacgcggcttagatggtata
cccggacttacgggacctcgaggaccacccggagaacgcggtttccctggagaacctgga
ttagatggattgccaggcgcaatcggacctcccggaattccaggaaaagatggtataccc
ggttcttcaggacctcaaggagagcccggtactccagcaacagttacacgaaacatgctc
aaactagaaaaaggtgaaaaaggagcgcgcggggaaatcggtcgacaaggtccgccggga
ccagaagggcctgcgggagaaaaagggagacccggattcgaaggttttccagggctcaaa
ggaacaccaggagatcgcggttttcctggccaagatggcgttccaggaaggccaggcact
cctggacgtagaggtgagaaaggagtaagtataaaaggcgaacctggagaagcaggccga
tcagggcatccaggacaaaaaggagaacctggtgaatatggagagaagggtgactctggt
gaatgtccaattaatttaacgaaagcctttaaaggcgatcgaggtttaactggtgataag
ggagaaccgggaccacctggaagagatggatatcctggtgataagggattacaaggtttc
tccggtcagcccggtttacccggcccgattggtgctcctgggcctgtcggtccaagaggt
ttacctggtccgcgaggagataaaggtaacatgggtcctatgggcttcccaggagagcct
ggtcgagaaggacctagaggtttcccgggcgctccggccccgaagggtgacaagggagag
cctggagtatcagttaaaggtagccctggtctaagaggacctcaaggtgaaaaaggagag
aaagggcttcccgggccaccgggaaaagaaggcatgcccggctatcaaggtttgccagga
tttgtcggcgaaaagggagatatcggcccgccgggaataaatggtttgccaggagcacct
ggtgaaaaaggagatactggtccgatcggtccacctggaccttcaggtgtggccggaatt
ccaggagtagacggaagcaaaggcgaaccaggattaccaggagaaggaggaagaccggga
cttccaggattccctggagcaaaaggtgatcgcggcgaaccaggcattgatggactaaaa
ggctatcccggcagacgaggaatacctggcagtccaggtagacctggagctgacggtgcg
ccaggtatcaaaggcgaatttggagaaaagggctcaccaggattccctggattaccgggt
atggaaggaaagcctggccgtcccggtatatcaggattgaaaggagatcaagggcctcct
ggtactcctggtttaccaggactcatcggttacgaaggaattaaaggagatattggtccc
ccgggtccgctgggaaggaaaggagaaccagggcaagtctcggaaaaaggacaaaaaggt
gaaccaggaatgccgggcatacgcggtcctccaggtccttcagggcgagatggtgttgac
ggattgaaaggcgaaactggcagaccaggttttggtcgtgacggattacctggattaaaa
ggagagcctggtgttccaggcagagacggagcaccaggattccaaggacaaaaaggtgat
actggcgtacgaggattcccaggaataaaaggcgactacggtttaccgggaatacctggc
gagccaggtccgcctggtatagatggacttcctggagaaattggagatatcggaccacat
ggagcaccaggcttccctgggctcaatggcgaaatgggacttccaggtcggcccggactt
gatggtgtgaaaggagaacgtggttcaccaggactcgttggattgcccggtattactggt
atcattggagaaaagggagatcgtggtcctccagggcctactattcaaattaagggtgaa
aaaggggaaccaggtattcctggacgtcctggagataaaggagacaaaggagatcaagga
gtcataggtatccctggttacgacggcgaaaaaggtgatagaggtctacctggacttgaa
ggattacccggacctcatggtgctcctggacttaagggtgaactaggatctcccggtatt
tctggagttcccggaattacagtaaaaggcgagaaaggtttgccaggtctaatgggtaaa
cacggtagagacggtttctcgggacgacctggtgaaaaaggtgaaccaggattacctggt
ttgcctggaccgaaaggagatattggtccttacggaccgctcggaccgcaaggtgaaaaa
ggtgatcaaggactaccgggtctaacaggatcgcccggacgtgacggagctccaggtctc
gaaggtgcgccaggattacctggtgagagagggtcgaaaggtgatcaagggctacctgga
ttatatggtgctccaggagcaaaaggagaacctggtcttcgaggacccagtggactggac
ggaccttcgggagaaaaaggtgaaagaggatgggacggtgtaaacggtttaccaggacca
gttggtgaaaaaggtgacagaggataccctggtccagtcggatcaatgggtatcgtcggc
tacgtaggtcaaaagggagataaaggtgatgattgtcttgagccaccgatgggaccaaaa
ggagaccgcggatacccaggagcggttgggccgcctggtccacctggagagaaaggactt
tcaggcccgcctggtttccccggattagacggtattaaaggcgctcaaggttacattggt
ccggcaggacctcctggattaccaggactacctggacccgtaggtgggcccggattaccg
ggtcttcaaggtcctatcggtgcaccaggactcatcggcgagcccggcgcgccatgcgaa
acaacacccgattatctcaccggtattcttctggtcaaacatagccaaagttcaagcgtc
ccgtattgcgacgcgggtcatattaaactttgggagggatacagtttgctttacaccgat
ggcgacgagagagcgcactctcaagacttaggttatgccggctcgtgtgtaagaaaattc
tctacgatacccttcctgttttgtgacgtcaatgacgtctgccattacgctagtcgcaat
gatcgttcttactggctgtctacgaataatccaattcctatgatgcccgttgaggagacg
gcgatagaaggatatatctccaggtgtgtggtttgcgaagttccggctaatgtgatagca
gtacacagtcaatcgataagcattccagaatgtccgaacggatggaccggtctttggatc
ggttatagttttgtaatgcacaccggtgcaggttctcaaggcggcggccagtctctttcg
agtcctggttcctgcctggaggacttccgcgccacaccgttcatcgagtgcaacggcgcc
aaaggacactgccattactattctaatcagtacagcttctggatggtaacaatagaggaa
gctctacagttcaggaaccccgagaaacagaccctaaaagcgggcagtcttagatcccga
ataagtcgctgccaagtttgtataaagaatacgtaa
DBGET
integrated database retrieval system
