KEGG   Cardiocondyla obscurior: 139102497
Entry
139102497         CDS       T10704                                 
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
cobs  Cardiocondyla obscurior
Pathway
cobs04382  Cornified envelope formation
cobs04512  ECM-receptor interaction
cobs04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cobs00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    139102497
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    139102497
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    139102497
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cobs04147]
    139102497
   00536 Glycosaminoglycan binding proteins [BR:cobs00536]
    139102497
Exosome [BR:cobs04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   139102497
Glycosaminoglycan binding proteins [BR:cobs00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   139102497
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 139102497
NCBI-ProteinID: XP_070512513
LinkDB
Position
LG05:complement(2044307..2085749)
AA seq 1846 aa
MRPRAAATSGIIGDASRGISRPVPLVLQIICVLALLVHTPLKLPFAEAVICKDSYKCNCK
GIKGQSGYPGIAGPQGTEGLPGDIGPDGPPGPKGEKGAGGEYGATGEKGYRGDVGIQGFV
GAPGLSGNPGLPGVMGPDGLDGCNGTDGRAGAPGIPGVYGARGPPGQLGEYGFPGEPGDG
GINSKGTKGIRGDPGIDGLEGYQGQKGFIGDTGYPGQTGDFGWPGNSGLRGMQGDRGDTV
YGVAGQFGEQGDRGEPGPPAKESEFKRENATVVKGPPGPKGMRGIYGDRGRKGEMGAKGP
QGRPGFLGIKGVKGEQGGDGPRGKQGVEGPPGPAGEKGEKGAPGFAGMPGPDGLDGESGE
EGNRGPPGRQGAEGEPGLYIPELDEIIAGNIGIQGDLGPPGEAGESGTPGLPGKVGFIGP
PGPPGPSGIPGQAGIKGSSIKGEQGDDGLPGTMGPQGPSGLPGLPGGLGAKGFPGITITG
PPGLDGFSGLPGFPGPPGDRGDPGPPGEKGFPGKGIRIRGPTGERGLPGNPGIAGPDGWP
GFSGPKGDKGIHGDDCGVCSPGLPGEKGERGESGLDGYPGASGFPGLPGPRGYKGIQGNR
GPQGPAGIEGDSGRPGIAGPQGPKGEHGRIFFPTGEKVNSPPGDFGEKGLPGPEGIRGPR
GQPGLIGDTGVPGPKGDKGEHGLPGLPGRDGLPGWNGIPGEKGENTTIPIEFLRGDPGLP
GSPGIKGIQGDRGKKGEPGPTADFTIDVQGDKGFKGPVGSPGETGAKGFEGRPGDEGLPG
FPGEQGSPGLSLQGSIGLKGYPGMPGDQGPRGTPGSPGSQGPVGFPGRVGNKGERGDPGT
NLTYGEIGERGSHGSKGEFGDSGLQGFPGRPGEDGVKGTKGGKGAPGFEGLPGLQGAKGQ
RGDSVQGDRGFPGIPGQTGLPGRIGDVGTRGPDGPFGFDGMKGLKGEIGFIGRRGDDGDI
GPQGYQGMHGLQGLPGAPGEKGEVGESGDSGPRGWPGFDGIDGAVGPKGEIGDAGIPGLP
GVTGPPGLKGLPGDPGYEGFPGPPGENSFSGPQGEVGEPGFMGEIGPPGLAGFDGRPGLP
GEPGEGKDGFNGLPGEKGDLGFDGYNGIPGPKGEIGDMGPDGFKGERGEQGFPGRPGASG
ISGRHGVKGERGPSGPPGFDGLKGKPGVDGDPGIMGKPGMPGDSGLRGGPGVMGAPGPKG
YVGEPGLPSYAFAEKGEYGNRGHDGFSGIKGQQGEPGYMGIPGRKGLIGDRGYPGPDGFE
GLPGFPGLKGDQGPRGAPGLPGEFPEPGEPGRPGLDGTPGIPGIPGQKGAPGEYGPNGPK
GISGDIGHSLRGPKGMVGEPGLRGFVGFPGMPGLEGLQGFPGTPGPKGYRGEPGIAAGST
KGQSGEPGWPGIDGRIGPKGMQGDSGLPGFDGLPGPKGERGDIGESGLPGIPGPSGPQGP
KGDPGLNPFPPFPRRGLPGDVGVPGLPGFPGQQGIMGEPGKDGLPGRQGETGMIGFPGPQ
GPDGKDGPPGYQGSPGTTGRQGQPGFRGAPGIPAPSGIGPRNRGFYFARHSQSEMIPFCP
RNTVKLWEGFSLLHTMGNGRAFAQDLGAAGSCIRRFSTMPFLFCNLNNVCDYANRNDYSY
WLSTTEPMPMMMTPIPAPEVGRYISRCSVCEASTRVIAIHSQTMAIPECPGGWDEIWIGY
SFLMHRDAGADGGGQSLVSPGSCLEEFRVRPFIECRGLGTCNYFSTATSYWLATIRDDEM
FRKPLQQTLKADYTSRVSRCAVCLRRQVTEVLKPFTSNNERAPNNWGIAPPAPPPPPRNP
PNYDSRVSPNRGRYTNNYNRRVPYNRRRGRVRGRQGERPTESPNNL
NT seq 5541 nt   +upstreamnt  +downstreamnt
atgcggcccagggccgcggcgacgtcaggaatcatcggcgacgcgagccgcggcatctcg
cggccggtcccgctcgtcctgcaaatcatctgcgtcctcgccctgctggtccacactccc
ctgaagttaccgttcgccgaagctgtgatctgcaaagactcgtacaaatgcaattgcaaa
ggaataaaagggcagtcgggatatcctgggatagctggacctcaaggaacggaagggctc
cctggtgacatcggacccgatggaccccccgggcccaaaggtgaaaagggggcgggtgga
gaatacggagccaccggagagaagggctaccggggcgatgtcggtatacaaggatttgtg
ggagctccaggactctccggcaatcccggcctacctggcgtgatgggtccggatggactc
gacgggtgtaacggaaccgacggtcgcgctggtgcaccgggtatacccggagtttacgga
gcccgtggtccaccaggacaactaggcgaatacggctttcccggggaaccaggcgacgga
ggtatcaactcgaagggtaccaaaggtattcgcggagaccctggtatcgacggactcgag
ggctatcaaggacagaagggattcatcggtgatacggggtatccaggacagacaggcgac
tttggttggccaggtaattctggcttgcgaggtatgcaaggtgatcgcggtgacaccgtg
tatggtgttgctggtcaatttggtgaacagggagatagaggagagcctggaccgccagct
aaagaaagcgaatttaagagggaaaatgcgacagtcgtcaaaggaccgccggggccgaaa
ggcatgaggggtatctatggcgatcgtggtcgtaagggagagatgggcgccaagggtcca
caaggtcgaccaggttttttgggtatcaaaggagtgaaaggtgaacaaggcggcgatgga
ccgagaggtaaacagggtgtcgagggtcctccaggcccagcgggcgagaagggtgagaaa
ggagctccaggtttcgcggggatgcccggtccggatggtcttgatggagaatcgggagaa
gaaggaaatcgtggtcctcctggtagacaaggagccgaaggagaacctgggctgtatatt
ccggaacttgatgagataatcgctggaaatatcgggattcaaggagatcttggtcctcct
ggtgaagcgggtgagtcaggaacaccaggtctgccaggaaaagtcggttttataggacca
ccgggtccaccaggaccttcgggcattcccggtcaagcgggaataaaaggctcgtccata
aaaggagagcaaggagatgatggcttgccaggaactatgggaccgcaaggaccatctgga
ttacctggtctacctggaggtttgggagccaaaggatttccgggaataacgataactgga
ccgccagggctagacggtttttcaggtcttccgggatttccaggccctcctggcgatcgc
ggtgatcccggtcctcctggagagaaaggttttcctggaaaaggaattagaattcgtggg
ccgacgggagaacgaggtttgcctggaaatcctggtatcgctggtcctgacggttggcct
ggtttttccggtcctaaaggtgacaagggtattcatggagacgactgtggtgtatgtagt
ccaggactgcccggggaaaaaggagaaaggggtgaatctggtttagacggatatcctgga
gcttcaggattccctggcttacctggtccacgtggatacaagggaatacaaggaaatcga
gggccgcaaggaccggcggggattgagggagatagcggaagaccgggcatcgcgggacct
caaggtcctaaaggagaacacggaagaatattctttccaacaggcgagaaagttaacagt
ccgcctggtgattttggcgaaaaaggcttacctggtcccgaaggaattagaggcccgcga
ggacaaccgggactcattggtgacacaggcgtaccgggtccgaaaggagataaaggtgaa
catggtcttcctggactgccgggacgagacggtttaccaggatggaatggcattcctggc
gaaaaaggtgaaaatactacgataccaattgagtttttgcgtggagatccgggattgccc
ggaagcccgggaatcaaaggaattcaaggagatagaggtaaaaaaggagaacctggtcca
accgcagatttcactatcgatgtacaaggcgataaaggcttcaaaggtcctgtaggatct
cccggcgagactggtgcgaaaggtttcgaaggacgtcccggtgacgaaggtcttccaggt
ttccccggcgaacaaggttctccaggactttcacttcaaggttctattggattgaaagga
taccccggaatgccaggagatcaaggccctcgaggtacgcctggctcaccaggatctcag
ggacccgtaggttttccgggccgggtcggcaacaaaggagaacgaggagatccaggcaca
aacttaacatatggcgaaattggagaacgtggatcgcacggttcaaaaggtgaattcggt
gattctggtctacaaggatttccaggccgaccgggagaagatggagtgaagggtactaaa
ggtggtaagggagcgcctggtttcgaaggattgccaggacttcaaggagccaaaggtcaa
cgtggagacagtgtacaaggtgatcgtggattcccgggaatacctggccagactggattg
cccggaagaatcggagatgttggaactcgcggccctgacggacctttcggtttcgacgga
atgaagggcttgaaaggagaaatcggatttatcggacgacgtggtgacgatggcgatata
gggcctcaaggataccaaggaatgcatggtttgcaaggtcttccaggtgctccaggagaa
aaaggagaagtcggcgaaagtggcgactcaggacctcgaggttggcctggtttcgacggt
atagacggagcagtcggtcctaaaggagagataggagacgcgggaatccctggtttacca
ggagtcacaggaccacctggattaaaaggtctccctggagatcctggttacgaaggcttc
ccggggccgcctggtgaaaattcgtttagcggacctcaaggtgaagtgggcgagccaggt
tttatgggagaaattggaccacctggtctagctggatttgacggacggccgggtttacca
ggagagccgggagaaggcaaagacggcttcaacggcttgccaggagagaaaggtgatctt
ggttttgacggatataatggaattcccgggccaaagggagaaattggagatatgggtcct
gatggattcaaaggcgaacgaggtgagcaaggctttccaggaagaccaggcgcatctgga
atatctggtagacacggtgtgaaaggtgaaagaggcccatctggaccgcccggatttgac
ggtttgaaaggaaaacctggtgtcgatggcgatccgggtataatgggcaaaccaggaatg
ccgggtgactctggtctaagaggagggccgggtgttatgggtgctcctggcccgaaaggt
tatgtaggtgaaccggggttaccgtcttacgcattcgcggagaagggcgagtatggtaat
cgtggccacgatggtttctccggtattaaaggacaacaaggtgaaccaggatatatgggc
atacccggccgtaagggtttaattggagatagaggatatccaggtccagacggtttcgaa
ggattacccggttttcctggtttaaaaggtgaccaaggacctcgtggagctccaggactt
cctggtgagtttcctgaacctggcgagcctggtcgccctggtctcgatgggacgcctgga
atccccgggattcctggacaaaaaggagcgcctggcgaatatgggccaaacggacctaaa
ggaattagcggtgatataggccacagtcttcgtggtcctaaaggaatggtcggagaacca
ggtctgcgaggattcgttggcttcccgggtatgccgggtttagaaggattgcaaggcttc
cccggaacacctggaccgaaaggttaccgtggagaaccaggaatagctgcgggtagtaca
aaagggcaatccggtgaacctggatggcctggaatcgacggtcgaatcggaccgaaggga
atgcaaggtgattctggtctacctggctttgatggattaccaggaccaaaaggagaaagg
ggagatatcggcgaatctggcttgcctggaatacctggtccttctgggccacaggggccg
aaaggagaccctggtttaaatcctttccctccattcccgaggcgaggacttcccggtgat
gtaggagttcccggattaccaggtttccctggacaacagggaataatgggtgagcctgga
aaagacggtctgccaggacggcaaggcgaaacagggatgattggatttcctggaccacaa
ggtccggacggcaaagatggacctcccggatatcaaggatctcctggaacaaccgggcga
cagggacaaccaggttttcgtggcgcacctggcatacctgccccaagtggaattggtcca
agaaatagaggattctactttgctcgccactctcaatccgagatgataccgttttgtcca
agaaataccgtgaagctctgggaaggattttcactattacatacgatgggtaatggacga
gccttcgcacaggatcttggcgctgctggcagttgcattagaagattctccactatgccc
ttcttattctgtaacctgaataacgtgtgcgattacgccaatcgtaacgattatagctac
tggcttagtacaaccgagcctatgccgatgatgatgacaccaataccggctccggaagtt
ggtagatatatatcaagatgttctgtctgcgaggcatcgacgagggtaatagctattcac
agtcaaactatggcaatacccgaatgcccgggtggctgggacgaaatttggattggatac
agtttcctcatgcatagagatgcaggcgcggacggtggcggtcagtccctcgtgtcgccc
ggatcttgtctggaggagttccgcgttagaccgtttatcgaatgccgcggtcttggcaca
tgcaattacttctccacggcgacatcgtactggctggcgaccattcgcgacgacgagatg
ttccgcaagccgctgcagcaaacgctcaaagccgattacacgtcccgggtgagccgttgc
gccgtatgcctccgacgacaagtcaccgaggtcttgaaacccttcacctcaaacaacgag
cgagcgcccaataattggggcatcgctccaccggcacctccaccgccaccgcgcaatccg
ccgaattacgactccagagtatcgcctaaccggggaagatacaccaacaactacaacaga
cgcgtaccttacaatcgcagaagaggccgtgtgcgcggacgacaaggagaacggccgaca
gagtctcccaacaatttgtag

DBGET integrated database retrieval system