Cardiocondyla obscurior: 139102535
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Entry
139102535 CDS
T10704
Symbol
Trpm
Name
(RefSeq) transient receptor potential cation channel trpm isoform X1
KO
K04978
transient receptor potential cation channel subfamily M member 3
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cobs04040
]
139102535 (Trpm)
Ion channels [BR:
cobs04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139102535 (Trpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
TRPM_tetra
LSDAT_prok
Ion_trans
PKD_channel
Pus10_THUMP_arc
Motif
Other DBs
NCBI-GeneID:
139102535
NCBI-ProteinID:
XP_070512588
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All DBs
Position
LG05:988532..998530
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AA seq
1685 aa
AA seq
DB search
MVIKNKSSRMTTERSWIEATFQKRECAKFIPSIEDEHRCCCGYSYTHHCGTGADVQSYNL
GENKEKEREQWSPVKNTRSFPTDAYGTIEFQGGPHPTKAQYVRLAHDTRPEPIVQLLCRE
WNLGLPKLLITVHGGRSNFELQPSLKKVLRKGLLKAAKTTGAWIFTGGTNTGVTRQVGDA
LLLERSQRQGRVVSIGIAPWGVLDKGHELIRRGGEVSYDCVSSPWTKYTVLNNRHAYFLL
VDNGTGGRYGAEIVLRRRLEKYISNLKLQPYTHSSIPVVALVIEGGTSTIRAVLEYVTDD
PPVPVVVCDGSGRAADLIAFMHKWRDGQTGEGEGPLDGVKEQVLETIKRTFQVSAEQAGQ
LCSELLQCTRKKHLITVFRISQDRPQELDQTILTALFKSKQLSPAEQLSLSLIWNRVDIA
RSEIFIYGQKWPPGALEQAMMQALQHDRIDFVKLLLENGVSMRKFLSIPRLEELYNTKEG
PSNTLGYILRDVRPNIPRGYMYTLHDIGLVINKLMGGAYRSQYTRRRFRMIYTKVMKRSG
GGQHMHRNSYALNCNTRFSTGASGKSDNLTMSLLAETLPANRDTPLFDYPFNELLIWAVL
TKRQQMALLMWQHGEEALAKALVALKLYKAMAHEAAEDDLETEVYDELRGYGKEFENIAL
ELLDYCYRQDDDQTQQLLTSELQNWSGQTCLSLAVTANHRPLLAHPCSQIILADLWMGGL
RTRKNTNLKVVLGLFCPFYITRLEFKSREELQLMPQTQEEHLIALEDEKEDSDSEHSVPA
GPDVEKHLRRSLSICNKSSNQQSVKALINSEHSAIIKETIVQENGKVLMDIDDGIHRAYG
LRSEYYDNKTTRPLKLRKKLYEFYTAPITKFWANAVAYIIFLVFFSYCILVRMDNSPSIA
EIYAIAYICTLGCEKVREIATSEPATLSHKFSVWAWNMWNPCDAAAIIFFQIGLALRFRY
STLDVGRVIYCVDCIYWYLRILNILGVNKYFGPLVTMMGKMVKNMIYFVVLLLVVLLSFG
VTRQAILNPYSDPKWRIIRDIFMEPYFMLYGEVYADSIDPDCGNEPGMDQCLPGHWITPA
VMSIYLLVANILLINLLIAVFNNIFNEVNAVAHQVWMFQRFTVVMEYEQKPVLPPPLIAI
CHVYLLFRYLLRHITQGKSGTGETCDNGLKLFLEADDMERLYDFEEDCVEGYFREQELKL
QMSTEERVKITTDRVENMHQKIEDIDKKESNQNVSLQTVEFRIRKLEELNQQTLAHLGVI
HRFMATYMPNEELVHLEAFDNVRQRRVSERSELSILSEADSHTQLPAAARRKKFLRAFTD
AAFLNAGHPVDDVLKMSEPMTSRENLSRHDSSVSVDAQIGQDDVKTITSLETDGSKDVLE
SKSIDKNEALSEKKISPDTSRETSKEISIEAVSKEVSREISREVSREVSREVSRETSREV
SKETSSENPPSDMRQDSIERTFRQDSVERGTLRQNSRTRSESDDFIPAPSSIQRVTWAEP
RIAVIPSSVNSASSGQRSILLTMRAEYTSITDELESYCGLLSPPRTPPISSPPSRMNNMS
ELSNPEMAWQIENEHLRDAEECDYQQMEDLIQRRYRDDSVDDEDNGPSNIHIDETNDITC
FLNVSNEHRQLSHSATIKEDRRPTISVTHEIEQTLALPPIRDSKVIDPNNKDLSIVPAPA
SETMC
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggttatcaagaacaaatctagtcgtatgacaactgagcgcagctggatagaggcaaca
tttcaaaaaagagaatgtgcaaaatttattccaagcatcgaagacgagcacagatgttgc
tgtggttattcgtatacccatcattgtggaactggggcggacgttcaaagttacaattta
ggcgaaaataaggagaaggaacgcgaacaatggtctccagtaaaaaatactcgttctttt
cccaccgatgcatatggcaccatagagttccaaggtggtccgcatcctacaaaagcacaa
tatgtccgattggctcatgatacacgaccagaaccgattgtacaactcctttgccgagaa
tggaatttaggattgcctaaattattaattacggtccatggtggtcgatctaattttgag
cttcagccaagtttaaagaaagttttacgcaaaggtttattgaaagctgctaaaacgaca
ggagcctggatattcacggggggaacgaacacaggtgttacacgacaggtcggtgatgca
ctgttgttggaacgttctcaacgacagggtcgcgtagtaagcataggtattgctccgtgg
ggagttttggataaaggccacgaattaattcgtcgtggtggagaagtatcatacgattgc
gtctcttcaccatggactaagtatacagtattaaacaatcggcacgcttactttttattg
gtggacaatggcactggtggccgatatggcgcagagattgttttacgcagaagattagaa
aaatatatttcaaatctaaaattacaaccatatacacatagtagcataccagtagtcgcg
ctagtcatcgaaggtggaacaagtacaattcgtgcagttttagaatacgtgaccgatgat
ccgcctgtacctgtggtggtttgcgatggttcgggacgtgcagctgatctaattgctttt
atgcacaagtggagagacgggcagactggtgaaggagaaggaccgctagacggtgttaaa
gaacaggttttggaaactattaagcgtacgtttcaagtttctgccgagcaagcgggtcaa
ctttgttcagaactcttgcaatgtacacgaaaaaaacatttaattactgtgttcagaata
tcgcaggacagaccgcaagaactcgatcaaacgatattgacagccttgtttaagtccaag
caactatcgccggccgaacagttgtcgctttctctaatatggaaccgcgtggatatcgct
cgaagtgaaatctttatttacggtcaaaagtggccgcctggtgctttagaacaagctatg
atgcaagcgcttcagcacgacaggatagactttgtaaaacttctattggaaaatggagta
tccatgcggaaatttttatcgatacctcgtcttgaggagctatataatacaaaagagggc
ccatcaaacacgttgggctacattttgcgcgatgtacgaccgaacattccacggggttac
atgtatacgttacatgacatcgggctcgtgattaacaaactgatgggcggtgcatatcgt
tcccaatatacgcgacgaagattccgtatgatttatacgaaggtaatgaagagatctggc
ggtggccaacatatgcatcgaaacagctatgctcttaattgcaatacgcgcttttccacg
ggcgccagtggaaaatctgataatttaactatgagcctgcttgctgagacgttaccggct
aatcgcgatactcctcttttcgattatccttttaacgagttacttatttgggctgtgcta
acgaagcgtcaacaaatggctttgttaatgtggcagcacggagaagaagcgttagcgaag
gcacttgttgcgctaaaactgtacaaggcgatggcgcacgaggcggcagaggatgattta
gaaactgaagtttacgatgagttgcgtggttacggcaaagaatttgaaaacatcgcactc
gaattattggactattgttaccgacaagatgacgatcaaacgcagcaactattaacttcg
gaacttcaaaattggtcagggcagacgtgtctgtcacttgcggttacagcgaatcatcgg
ccgctgttggcgcatccttgtagtcaaattattttagccgatttatggatggggggtctt
cgtacacgtaaaaacacaaacttaaaggtagttttgggattattttgtcctttttatata
acacgattggagttcaagagtagagaagaattacaattgatgcctcaaacgcaggaggag
catttaattgctttggaggatgagaaagaagatagcgattccgaacatagtgttccagca
ggaccagacgttgagaaacatctgcgcaggagcctgagcatatgcaacaaatccagtaac
caacaaagtgttaaggctttaattaacagtgaacatagtgcaataatcaaggagacgatt
gtccaagaaaatggaaaagtactaatggatattgatgatgggatacatcgtgcttacggt
cttcgatccgaatattacgataataaaacaaccaggccattaaaattaaggaagaaatta
tatgaattctacactgctccaataacaaaattttgggcaaatgctgtagcctatattatc
ttcttagttttcttctcttattgcattttggtgcgcatggataattctccgtcgatagcc
gaaatatacgcgatcgcgtacatatgcactctcggatgtgaaaaagtacgcgagatagcg
acttcagaacctgcgactctatcgcacaaattcagtgtatgggcctggaacatgtggaat
ccctgtgacgctgccgctattatattttttcaaattggattagcgttacgttttcgatat
tcaactctagacgtaggtcgtgttatatattgtgttgattgcatttactggtacttacga
atactcaacatccttggtgttaacaagtattttggtcctctggtgaccatgatgggaaaa
atggtcaaaaatatgatatacttcgtggtacttttactggttgtacttctgagttttggc
gtgaccaggcaagctatattaaatccttattctgatccaaagtggcgcatcatacgagat
atatttatggagccatattttatgttatatggagaagtgtacgcggatagtatagatcct
gattgtggaaatgagccaggaatggaccagtgccttccgggccattggatcacgcctgct
gtaatgtccatatatcttttagttgccaatattttgctgataaatttgttaatcgcggta
tttaacaatatttttaacgaggtaaatgctgtagctcatcaagtctggatgtttcaacga
ttcaccgttgttatggaatatgagcagaaaccagtattaccaccgccgcttatagcgatt
tgccatgtatatttattgttcagatatttgctaagacatattacgcaaggcaaaagtggc
accggcgagacctgtgataacgggctgaaattatttctggaggccgacgacatggaaaga
ctgtacgattttgaggaggattgcgtcgaaggttatttccgcgaacaggaactcaaattg
caaatgtctacggaagagcgtgtaaaaattacgacggatcgagtagagaatatgcatcag
aagatcgaggatatcgataagaaagaaagcaatcaaaacgtgtctctacagaccgtcgaa
tttcgtatccgaaaactggaggagttgaatcagcagacactggcgcatctcggagtcatt
catcgtttcatggcgacgtatatgccgaatgaagaactagttcatttagaggcatttgat
aacgtccgccagcgtcgggtatcagaacggtcggaactgtcgattctgtcggaggcggat
tctcacacgcagttgccagcggccgcgcggcgcaaaaagtttttgcgagcttttactgac
gccgcttttctgaatgctggccacccggtggacgacgttctcaagatgtccgagcccatg
acttctcgtgaaaatcttagtaggcacgattcctccgtaagcgtggatgctcaaattggc
caggacgacgtaaagacgattactagcttagaaactgacggcagtaaagacgtcctcgaa
agtaaatcgattgataaaaatgaagcactgtccgagaagaaaattagcccggacaccagc
agagaaacgagcaaagaaattagtatcgaggccgtcagcaaggaagtcagcagggaaatc
agcagagaagtcagcagagaagtcagcagggaagtcagcagggaaaccagcagagaagtt
agcaaggaaactagcagtgagaatccaccttcggatatgaggcaggactcgatagagcgc
acgttcaggcaagattctgtcgaacgcggtacacttagacagaatagcagaactcgttcg
gaatcggacgacttcatacctgcgccatccagtattcagagagtaacatgggcagagcct
cgcatagccgtgattccgtcgtccgttaactcggctagcagtggacagagatcaattttg
ttgacgatgcgcgccgaatacaccagcatcacggatgaactggaaagctactgcggtctg
ttaagtccgccgagaacgccaccgatctcgtcgccgccgtcgcgaatgaacaatatgtca
gaattgtcaaatccggagatggcatggcaaatcgagaacgaacacttgcgcgacgcggaa
gaatgcgattatcagcagatggaagatctaattcagcgacgttatcgcgacgacagcgtc
gacgatgaagacaacgggccttcgaacatacatattgacgagacaaacgatatcacatgt
ttcttgaacgtgtccaacgagcaccgtcagctgtctcactccgctacgatcaaagaagat
cgtcgtccgacaatcagcgtcactcacgaaatcgagcaaacactcgcgctaccgccgatc
cgcgattcaaaggtgatcgatccgaataacaaggatctgagtatcgtacctgcccccgct
tctgaaactatgtgttaa
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integrated database retrieval system
