Cardiocondyla obscurior: 139102545
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Entry
139102545 CDS
T10704
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139102545
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
139102545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
MMR_HSR1
RsgA_GTPase
NB-ARC
ABC_tran
nSTAND3
DUF6498
AAA_16
Motif
Other DBs
NCBI-GeneID:
139102545
NCBI-ProteinID:
XP_070512616
LinkDB
All DBs
AA seq
386 aa
AA seq
DB search
MEDYIVLSVRVMLPTMSKESEVKDGENKNLIKIVERPTFILKTREGENRAVSPNQRNGQK
KEIDTSSSIVKIQDSIRVLSICPEMNTCIKFMDENMQLCENTIDYLYDQQDFLVVGCLGA
QGVGKSTIMSLLTSHYSSNIFQIQDLSHYENSTNCTTGIDLFITKNRVMYLDTQPILSGF
GIDSTSSDQKKGAPDFVNSDSNLELQSLQFAAFLFSICHVIVFIQDWFVDPNVVRFLQTA
EMLKPSSTTIIDQDYVEYYPHMVFLHNKAELQDFTPAIIGEIKDFYNKIFSISRLQTHSG
IDMSHCSKENNLNLFLIPSRTKEEDKIFCENEEFLIDKLRTKIHGVPRNSIASSVLTEKN
WYHYVSKILEVIKKSHLSSEYGRLMP
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaagactatattgttttaagtgtaagagtgatgttgccaacaatgtcaaaagaatca
gaggttaaggatggagaaaataaaaatttaataaaaattgtagaacggccaacatttata
ttaaaaactagagaaggagaaaatagagctgtttctcccaaccaacgtaacggccagaaa
aaagaaattgatacatcttcatcaatagtaaaaattcaagattcaattcgtgttctttct
atatgccctgaaatgaatacatgtatcaaattcatggatgagaatatgcaattatgtgag
aatactatagattatttatatgatcagcaagactttttagttgttggatgcctaggtgca
caaggtgttggcaaatcaacaattatgtcattactaacatcacattattcatccaacatt
tttcaaattcaagacctgtcacattatgaaaatagtacaaattgtaccactggaatagat
ctatttataactaaaaatagagtgatgtatttggatactcaacccattctctctggattt
ggaattgattctacatcttctgatcaaaaaaaaggtgcacctgattttgtgaatagtgat
tctaatttagaattacaatcactgcaatttgcagcgttcctattttcgatatgtcatgtt
attgtatttatccaagattggtttgttgatccgaatgtagtaagatttttacagactgct
gaaatgttgaaaccgtcttcaacaactatcatagatcaagattacgttgagtattatcca
catatggtatttttacataacaaagcggaattgcaagattttacacctgctattattggc
gaaattaaggatttttataataaaatattttctatctctcgtttgcaaactcacagcggt
atagatatgagtcattgctcgaaagaaaataatttaaatttatttttaataccctcaaga
actaaagaagaagacaaaattttttgcgaaaatgaagaatttcttatagacaaattacga
acaaagatacatggagtacctaggaactcaattgcgtcatctgtattaacagaaaaaaat
tggtatcattacgtttcgaaaatattagaagtcataaagaaaagccacttatcttcagaa
tatggaagactaatgccttaa
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