Cardiocondyla obscurior: 139102651
Help
Entry
139102651 CDS
T10704
Symbol
Lanb1
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139102651 (Lanb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
139102651
NCBI-ProteinID:
XP_070512820
LinkDB
All DBs
Position
LG05:complement(6778411..6787657)
Genome browser
AA seq
1805 aa
AA seq
DB search
MLHTYYGHVALAALIIILINLAGPVSSQYGPSKLPSRGSMQRGDMSPLDVVTESYNRLGS
TIPKSRGVHAKRPHPCEQSSCYPATGNLLIGRKNKLSASSTCGLRGPERFCIVSHLKDRK
KCFFCDSSIPKQQHNIENIVSGVNPRSWWQAENGVENVTIRFDLEAEFHFTHIIIRFQTF
RPAAMLIERSYDSGETWQVYRYFAHNCEHYFPEIPTHQPQRLTDVICETRYSAVAPSTGG
DVIFRVLPRNLEIDNPYSKEVQNLLKITNLRINMTGLHTLGDDLLDDRAETKEKYYYAIQ
DMVIRGSCSCHGHASRCLPLPGVIDEENMVHGRCECTHNTKGLNCGECEDFYNDLPWKPA
VGKQTNACRPCNCNNHTTSCHFDETVYERSGRVSGGVCDNCQHNTRGQNCEQCKPFYYHD
VTKDISDPYACQPCDCDLGGSLDDGICDSRTDPLSGDESGRCHCKTNVEGRRCDRCKNGF
WDFDPDSAEGCQACTCNTLGTVDNQGCNVVTGECTCKRYVTARDCNQCLPEYWGLSEDPD
GCKPCECDPGGSYENSCDVITGQCRCRPHVSGRTCNQPEQSYYTGSLDFLIYEGELSRAT
DNCQVVIREPYRDGRNSTWTGTGFMKALEGSVLNFTIDDIRRSMWYDVIVRYEPVHPGVW
EDVQIILERDSLPDPNGPCADWRPEYDRLWVQLPLRSRSAMAQPSICLEAGKRYNLLLQF
RKFNSHIDTPLASILVDSIVLKPRIDVIPFFKTPGLGELRRQEYERYHCNELFNDVNSVW
SNIPDICRKYQNSIGYYVFDGAHSCECNPTGSRSLLCENYGGMCPCKSNVVGRRCDRCAP
GTYGFGPEGCISCDCDGVGALDNFCDVETGRCKCRPNTYGRTCGQCEPGFWNFPHCQRCE
CHGHADSCDSKTGACLNCRDFTTGHNCDRCVDDFYGDPRIGVDIPCRACPCPGTRESGHS
YANSCSLDSITQDVVCECFEGYSGPRCEHCAENYFGNPEIPGGSCQLCNCNNNTDLRRPG
NCDPQSGHCLQCLFNTDGSTCEICKPGFYGDALRQDCQDCGCNVLGTDKAAGPCNHRNGQ
CPCLPHVIGQLCDSCEENHWRIASGKGCDPCECDVVGSISDRCNPFDGTCECRPGFGGRR
CNECQANFWGNPNVECYPCECDVIGSASQQCDRETGVCVCHKGIGGEKCDQCDRGYHGEA
PQCSPCGECFDNWDLILDGLKNKTNTVIQEASRIQKVGTTGVYSQEFDNMKESLNEVRDL
ISNTTIRSQDLDALNNLADELKTNISKSAKQLEEANNHLENLNQRVNLGDVALKKLRNRT
NNLHNVAAELRENATRLQEENVLGALNVTQQMAEQSRQAEKTANDTTTLLGDAERFRKHT
ENLLAKSRASVNEAQERNKESLTKLNKKLNTFGVAIPELNLQMCGENVTECSTVCGGAGC
GFCGGLSCDVGAVSKANQALDVAKQQATKIKSHKDEAEQLLRNMSQIKQDATAARSNAQD
AFNYAWEARNRSDKITKDLSDITQRILSTLNEDQPTPSMVRDLANQVLAKNIQLEPDEIT
RLADRIKSIVGSLTDSEKILADTKDDLQLAHDLEKRANHTKEIAIEKQTLANKVILLLSD
AQKAQHLAQNAIDKAEADVSKSQEDLANIADVTKAAQIQANSTTKTVEALDFRLKQLQTQ
SARNGFILTEIGTEAKKVADEAKVIDGKTKKLSEEYKRANESLNQRVNKSKGDIQRAKKL
LQRASELTADTSTKSKDLDGMESVYKDNERVLTDLMSDVDALTTEMERHLAEIEDKSQVY
RRCSA
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacacttattatgggcacgtggctcttgcagctttaatcattatacttattaac
ttagcaggacctgtaagttcacaatatggcccaagcaaattgccatccagaggatcgatg
cagagaggggatatgtcacccttggatgtagtgacagaaagttataatcgtctagggtca
actattcccaagtcaagaggtgtgcacgcgaaacgaccgcatccctgcgagcagagctcg
tgttatcctgcgactgggaatctcctaattggccgtaagaacaaattaagcgcttcatcg
acgtgcggcctcagaggccctgaaagattctgcatcgtttctcatcttaaggacagaaag
aagtgcttcttctgcgattcgtcgatacctaaacagcaacataatatcgagaacatcgtt
agcggggtaaatcctagatcgtggtggcaggctgagaacggagtggaaaatgttacaata
cgcttcgatcttgaggcagagtttcattttacgcacatcattattcgcttccaaaccttc
cgtccagctgccatgttaattgaacggtcgtacgactccggagaaacctggcaggtgtat
cggtactttgctcacaattgcgaacactatttccctgaaatcccgacccatcaaccccaa
agattaacagacgtcatctgcgagacaaggtattcggctgtggcgccgtccactggtgga
gatgtaattttcagggtattgccacgcaatttggaaattgataatccttattcaaaagaa
gtacaaaatctattaaagatcaccaatctcaggatcaacatgaccggacttcatactctg
ggggatgatttactggacgatcgggccgagactaaagaaaaatattattacgccatccag
gatatggtaattcgtggttcgtgctcctgccatgggcacgcttccagatgtttgccgctt
cctggagttatcgatgaggagaatatggttcacggcagatgtgaatgcacgcacaacacc
aagggcctaaattgcggagaatgtgaagacttttacaatgacctgccatggaaacccgcg
gttggcaaacagacaaacgcctgtaggccatgcaactgtaacaatcatacaacctcctgc
cacttcgatgaaacggtttacgaaagatcaggcagagtgtccggcggtgtctgtgacaat
tgccagcataatacacgagggcagaattgcgaacaatgcaagccattctattatcatgac
gtaacgaaagatatttctgatccatatgcttgtcaaccctgtgattgcgatctaggcgga
tctttagatgacggcatatgtgattcacgaactgatcctctaagtggagacgagtctgga
cggtgtcactgcaaaacaaatgttgaaggacgtcgttgcgatcgttgcaagaacggtttt
tgggacttcgatcccgacagtgccgaaggatgtcaagcttgcacctgtaacactttgggt
accgtcgataatcagggctgcaacgtggtaaccggcgagtgtacgtgcaaacggtatgtc
acagcgcgtgactgcaatcagtgcttgccggaatattggggactctctgaagatccggat
ggttgcaaaccatgcgagtgcgatcccggtggttcctacgaaaattcctgcgacgttatt
accggccaatgcagatgcagaccacacgtcagcgggagaacttgtaatcagccggaacaa
agttattacactggctcactagattttcttatttatgaaggcgaattgtctagagcgacc
gataattgtcaagtggtaatcagagaaccttaccgcgacggcaggaatagcacgtggacc
ggcacgggtttcatgaaggctctcgagggatctgtgttaaacttcaccatcgacgatatt
cgtagatcgatgtggtacgacgtgattgtgcgatacgaaccggtgcatccgggtgtttgg
gaggatgtacagattattctcgagagagacagtctaccggatcccaacggaccgtgcgct
gattggagacccgaatacgatcgtttgtgggttcaattacctctgcgttcaagaagcgct
atggcacaaccgtctatatgtttagaggcgggaaaacgctataatcttctgctgcaattc
cgtaaatttaacagccacatagacacgcctttggcctctatcctggtcgattcgattgtg
ctaaaaccaagaatagacgtaatacccttctttaaaacaccgggtttgggtgaattacgt
cgccaagaatacgaacgttaccattgtaatgaattattcaacgatgttaatagcgtatgg
agcaatatacctgacatctgtagaaagtatcaaaatagcatcggctattacgttttcgat
ggcgctcattcttgcgaatgtaatcctacgggctctcgcagtcttttatgtgagaactac
ggcggaatgtgcccatgcaaatcgaatgtagtcggtagacggtgcgaccgttgtgcacca
ggaacttatggattcggtccggagggatgcatttcttgcgattgtgacggtgttggtgct
ctcgataatttctgcgacgtcgaaaccggtcgctgcaagtgccgtcctaatacttacggc
agaacttgcggccagtgcgagcccggcttctggaatttcccgcattgtcagcgctgcgaa
tgccatggacacgcggatagttgcgactcaaaaaccggagcttgtctcaactgccgagat
ttcactactggacacaattgcgatcgatgcgtcgacgatttctatggcgatccgcgaatt
ggagtggatataccttgcagagcgtgtccctgcccgggcacacgtgaatccggccactcc
tacgctaatagttgttcattagattcaataacgcaagacgtagtgtgcgaatgtttcgaa
ggatattccggacctcgttgcgagcattgcgccgagaattatttcggcaatccagaaata
ccaggcggtagttgccagctttgcaactgtaataacaatacagacttacgtcgtcccggt
aactgcgatccacaatccggtcattgcctccagtgcctatttaacaccgacggttccact
tgtgagatatgtaaaccaggattttacggagatgctttgcgacaagactgccaagattgc
gggtgcaacgtcctgggcaccgacaaggccgcaggtccgtgcaaccatcgtaacggacaa
tgtccgtgtctgccacatgtcataggacagctttgtgactcctgcgaagaaaatcattgg
agaatagctagcggaaaaggctgcgatccttgcgagtgcgacgtagttggaagtatttca
gacagatgcaaccccttcgatggcacttgcgagtgcagaccaggatttggcggtagacga
tgtaacgagtgtcaggcaaacttttggggtaacccgaatgtagaatgctacccatgcgag
tgcgacgtgatcggttctgcaagccagcaatgcgacagagagaccggagtatgcgtttgc
cataaaggcattggcggcgaaaaatgtgaccagtgcgaccgtggttatcacggcgaggct
ccgcaatgtagcccgtgtggtgaatgcttcgataattgggatttgatcttggacggtctt
aaaaataaaacaaatacggtcattcaagaggcttcgaggatacaaaaagtgggcacgacc
ggcgtgtacagtcaagaattcgacaacatgaaggaatctcttaatgaagtgcgggattta
attagcaacactactatcaggagccaagatctggatgcgctaaacaatttagctgacgaa
ttgaaaacaaatatttctaaatcggctaagcagttggaggaagcaaataatcacttggag
aatctcaatcaacgagtcaatcttggcgacgtcgcattgaaaaaattgagaaacaggacg
aataacttacataacgtggctgccgaattgcgagagaatgccacgagattacaggaggag
aacgtcctcggcgctttaaacgtaacccagcaaatggccgaacaatccaggcaggctgag
aaaacggcaaatgatactacgacgcttctcggcgatgcagaacgattccgaaagcatacc
gaaaaccttctggcaaagagtcgcgcctcagttaatgaagctcaagagaggaacaaagaa
tctttgacgaagttaaataagaaattaaatacattcggtgtggcgatacctgaattaaat
ctacagatgtgcggtgaaaatgtgacggaatgtagcaccgtctgcggtggtgcgggatgc
ggcttctgcggaggattatcttgtgacgtaggcgcggtcagcaaggctaatcaagctcta
gatgttgcgaaacagcaagctaccaaaatcaagagccataaagacgaggccgaacaacta
ttacgcaacatgagccaaatcaagcaagatgcgacagcggcaagatccaatgctcaagac
gccttcaattacgcatgggaagcacgtaatcgttctgacaagatcacgaaagatctttca
gatataacacaacgaattttgagtactttgaacgaggaccagcctacaccatccatggtg
agagatctcgcgaaccaagtgctcgctaagaatatccaattggaaccggacgaaatcaca
cggctggctgatcgtatcaagagtatcgtgggctctctcactgattctgaaaaaattctt
gctgatacgaaggacgatctccaactggcgcacgacctcgagaaacgagccaaccacacc
aaagagatagccatcgaaaaacaaaccttagcgaacaaagtaattctgctactgagcgac
gcgcagaaggcacaacatttggcgcaaaatgctatcgacaaagcggaagcggacgtatct
aaatcgcaggaagatctcgccaacatcgccgacgtgacgaaagctgctcaaatccaggct
aatagcacgacgaaaacggtggaggcactagactttcgtttgaaacagcttcaaacgcaa
tctgcgaggaacggttttatcttaacggaaattggcacggaggctaagaaagttgccgac
gaggcgaaggtgattgacgggaaaacgaaaaaactgtcagaagagtacaaacgggcgaac
gaatcgttgaatcagcgggtgaataaaagcaagggggatattcagcgagcgaagaaactt
ctgcagcgtgcctccgagttaacggcggacacttcgaccaagtccaaggatctggacggc
atggaaagcgtttataaggataacgaacgggtgctgacagatctgatgagcgacgtggac
gcgctgacgaccgagatggaaagacacttagcggagatcgaggacaaatcacaggtgtac
agacggtgctccgcttaa
DBGET
integrated database retrieval system
