Cardiocondyla obscurior: 139102911
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Entry
139102911 CDS
T10704
Name
(RefSeq) syntaxin 1A isoform X1
KO
K04560
syntaxin 1A
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139102911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139102911
Membrane trafficking [BR:
cobs04131
]
SNARE
Syntaxin (Qa)
Stx-PM
139102911
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
PoNi_N
NPIP
Lzipper-MIP1
Spectrin_Anc-1_2
GNVR
PhrC_PhrF
Spectrin_Anc-1
ETRAMP
Laminin_II
Vac_Fusion
DUF6584
Motif
Other DBs
NCBI-GeneID:
139102911
NCBI-ProteinID:
XP_070513210
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All DBs
Position
LG05:complement(6242360..6295821)
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AA seq
293 aa
AA seq
DB search
MTKDRLAALVAAQSDDDDVADDVSVNVGAADDFMTEFFAEVEEIREMIDRIQTNVEDVKK
KHSAILSAPQTDEKVKLELEDLMSDIKKTANKVRAKLKVIEQNIEQEEHTNKSSADLRIR
KTQHSTLSRKFVEVMTEYNRTQTDYRERCKGRIQRQLEITGRTTTNEELEEMLEQGNPAV
FTQGIIMETQQAKQTLADIEARHADIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYH
VEHAVDYVQTATQDTKKALKYQSKARRKKIMIMICLAVLGVVVATTIGGYFGL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgactaaggatagattagcagccctcgtcgcggcccagtcggacgacgacgatgtggcg
gacgatgtgtccgtcaacgttggggcggcggatgatttcatgacggaattcttcgcggag
gtggaggaaatccgcgaaatgatagataggatccagacgaatgtggaagatgtgaagaaa
aagcacagcgccattctctccgcaccgcagaccgatgaaaaggtgaaactggagctcgag
gacttgatgtctgacatcaagaaaaccgctaacaaagtgagggctaaactaaaggtgata
gagcagaatatcgagcaggaggagcacacgaacaaatcgtcagcagatctgaggatacgc
aaaactcagcattcgacgttgtccaggaagtttgtcgaggtgatgacggagtataatcgg
acacagaccgattacagggagcggtgtaaggggagaatacaacgacagctcgaaatcacg
gggagaacgaccaccaacgaggaactcgaggagatgttggagcaaggaaatccagccgtt
ttcacgcaagggatcatcatggaaacgcaacaagcaaaacaaacccttgcggacatcgag
gcgcgtcacgctgacatcattaaactcgaaaactccatcagggagctgcacgacatgttc
atggacatggccatgctagtagagagtcagggcgagatgatagatcgcatagagtaccac
gtggaacacgcggtggactacgtgcagacggctacgcaggataccaaaaaagcactcaag
tatcaaagcaaagctcgacggaagaagatcatgatcatgatttgcctcgccgtattgggc
gttgtcgtcgccaccaccatcggtggatacttcggactgtga
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