Cardiocondyla obscurior: 139103004
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Entry
139103004 CDS
T10704
Symbol
Pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03013
Nucleocytoplasmic transport
cobs03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139103004 (Pnn)
Spliceosome [BR:
cobs03041
]
Complex C
Other components
EJC/TREX
139103004 (Pnn)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139103004
NCBI-ProteinID:
XP_070513409
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Position
LG05:complement(705956..708235)
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AA seq
384 aa
AA seq
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MVNEIIMRKLDYQELWGADRLEAQLELARDGLRGLDRSIRKILGRDVPDGESGPLQSRIP
QKRLLQEDRRKTITEFVNNELPGGKRRWQSNSSVEPKTVFSRLSARVPSTADDSADEDDN
VTKPAVSSRVIATPREIPSRQEVIRRERTDERSRQRNKRMFGALLGTLQKFRQEETKLKA
KEDKKAEVEARVEEARRREKEELRKERQQLFSSRKRQLAEVRVLEAKLARSRQFQDWRNA
QLPLASFIKTQTQPPIYYLPKHKDSQTDMLLAQSAKELHETIERREKTLIEELNLIEAQI
GLNKHSQNFETSSTVHTIEAPRLIEEGEENRDPNPEHNIEAAINDDTAINDISMQSVINE
NFDNDHNVEKKEDEQLDQVPDVNG
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacgaaataataatgagaaaattagattatcaggagttatggggagccgataga
ttagaggctcaattagaacttgctcgtgacgggcttcgtggtcttgaccgtagtattcgt
aaaatcttaggtcgcgatgttcctgacggcgaaagcggtccattgcaatcgagaatacct
caaaagagattgttgcaagaagatcgtcgtaaaactataactgagtttgtgaataatgaa
ctacctggaggtaaaagacgttggcaaagtaattctagcgtggaaccaaaaacagttttt
agtcgattaagcgcacgtgttccttctactgcggatgatagcgctgatgaagacgataat
gttactaagcctgctgtgtcatccagagtaatagctactcctcgagaaattccttcgcgt
caagaggttatcagacgcgaaagaaccgacgaacgtagtcggcaaagaaataaacgtatg
tttggtgcacttttgggtactttacaaaaatttagacaagaggaaactaaacttaaggca
aaggaggataaaaaggcagaggtagaggctagagtagaagaagctagaagacgagaaaaa
gaagaactacgaaaagagagacaacagttattttcatcgcgaaaacgacaattagctgaa
gtacgagtactagaagcaaagcttgcacgtagtcggcaatttcaagattggcgtaatgca
caattaccacttgcttcatttataaaaactcagactcaacctcctatttattacttacca
aagcataaagattcgcagacggatatgttattggcacaatctgcaaaagaacttcacgaa
acaattgaaagaagagaaaaaacattgattgaagaattaaatttaatagaagctcagata
ggattaaacaaacactcacaaaactttgaaacatcttcgactgtacatacaatagaagct
cctcgtttaatagaagagggtgaagaaaatcgagatcctaatccagaacataatattgaa
gctgctatcaacgatgatactgccatcaatgatatttcaatgcaatctgtaataaatgaa
aactttgataatgatcataacgtggagaaaaaagaagacgaacaactggatcaagttcca
gacgtaaatggctag
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