Cardiocondyla obscurior: 139103054
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Entry
139103054 CDS
T10704
Name
(RefSeq) interference hedgehog isoform X1
KO
K20245
brother of ihog
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04341
Hedgehog signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04341 Hedgehog signaling pathway - fly
139103054
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
C2-set_3
Fn3-III_PB4
DUF7359
DUF5581
Motif
Other DBs
NCBI-GeneID:
139103054
NCBI-ProteinID:
XP_070513485
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Position
LG06:2055477..2065078
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AA seq
825 aa
AA seq
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MTLASLVLAECVKMTSISSLCGIIVILFCSPIAYTCEEDKIQELSMSFTRHPLPLAAPLN
DDVNFECSLNIPAERFAWHHRPLGSNKWTPVFSSNVSGKTSRHVVNFDNESKAGDYRCVA
FFGISGLASDPARLTLATVQKFSDKNDVFIEVTEGNTVPITCPVPYSEPEAIVQFYKNGM
LIENVDLVNGRTMILKNVKLTDSGTYHCSVNNYITLVTFMSNHKTILTVHGNFTFQPPYL
TKQPQTEYVVRRGKNVTLECFGAGYPVPRVTWSRLGSSLPLKSIKSSFGLTLVHVQLSDR
GEYDCVWSNEMRQIKSAIILRVVELPRVTKQPSACKFHEGGKLQLSCDVTGEPEPVVEWL
INGESLIPSKTQEMIGSTLLISEVEKKHAGIVQCVASNEYGSHSGYNLLQVQPKEHVVGG
KIESKPDYGPISRHKHTRGGGRRRNKEGKKKGGAAVILVPPDQPNVTRLSDVSVMVRWSV
PENKGLPIQFFKVQYREIGPKMNGKQTKWMTANSEIPSHVRSFEVTDLQPDHTYRFRIAA
VYSNNDNKLSPNSVRFHLNRDTGIESNKMPIPLLTNTEALGPHQVLLVWQNPDRSAKIDG
FYIYHRRSTTVSDYLKTTVEGKNASNMTISHLDPDTTYEFKVQSFSVDAGSEFSQILRQK
TKKIVVEHPVQQVVAENKLKPNESNKNVSIHIILGGVFGASLILIALAFVARFLYKRVKC
AQNQESQSEGKPITNGRVMNGGVTDSKINITSNPLAGLDTSEDIMQPKSGQQSSMEMTSF
LNGQNNNGSNNGHNNGDAAGSDVNVTSHSEPSSLRQGPLPIEQRL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaccctggcttctcttgtgcttgcagaatgtgtcaagatgacatctatctcctcttta
tgtggcatcatcgttatcctgttctgcagtccgatcgcatatacatgcgaagaggacaaa
atccaggagttgagcatgtcctttacccgacatccgttgcctctggccgccccattaaat
gacgatgtgaactttgaatgcagcctcaacatccctgcggagcgtttcgcttggcatcac
agacctctgggttcaaacaaatggacgcccgtgttctcttctaatgtcagtggcaaaact
tcgcgacacgttgttaactttgacaacgagtcgaaagccggagactaccgttgtgtcgcg
tttttcggtatcagtggcttagcgtcagatccagcaagactaacactcgctacggtgcaa
aaattttccgataaaaacgatgtctttatcgaagtgacagaaggtaacaccgtgcctatc
acatgtcccgtaccgtactctgaaccggaagccattgtacagttttacaaaaacggtatg
ctcattgaaaacgtggatttggtgaacggccgaactatgattctcaagaatgttaaattg
acagatagtggaacgtatcactgtagcgttaacaattacataacgttagtaacgtttatg
agcaaccataagaccatattgacggtacacggaaacttcacttttcaaccaccgtatctc
accaagcagccgcagacggaatacgttgttcggcgcggcaagaacgttactctggagtgt
ttcggtgctggttatcccgtaccgcgcgtcacctggagccgactaggcagctctctgcca
ttaaagtcgataaaatcttctttcgggttaacattggtccacgttcagctatctgatcgc
ggggaatacgattgtgtgtggagcaacgagatgcgacagattaaatcggcgatcatttta
cgagtggtagaactaccgagggtgacgaaacaaccgagtgcatgcaagttccacgaaggt
gggaaactgcagctttcatgtgacgtaacgggcgagccggaaccggtcgttgaatggctt
atcaacggggaatctttgatacctagcaaaacgcaagagatgattggatctactcttctc
atatccgaggtcgaaaagaagcacgctggaatcgttcaatgtgtcgcgagcaacgagtac
ggatcgcattcgggatacaacctgttgcaggtccaaccgaaagagcacgttgttggaggc
aaaattgagtcgaagccagactatgggccaatatcgagacataagcatactaggggcggc
ggtagacgcaggaataaggaaggaaagaaaaagggaggtgcagcagtgattttggtacct
cccgatcagccaaacgtcacaagattgtctgacgtctctgtcatggtacgttggtcagtg
ccagagaacaaaggtctgccgatacaattttttaaggttcaatatcgagagattggccca
aagatgaatggcaaacaaacgaaatggatgacagctaactccgagataccgagccatgtg
cgatcttttgaagtaaccgatctacagcccgatcatacctaccgatttaggatcgccgca
gtgtactcgaataatgacaacaaattgagtccaaattcagtgcgctttcatctcaatagg
gatactggaattgagagcaataaaatgccaatacccttattgactaatacggaagcgctg
ggaccacatcaagtgttactagtttggcagaatcctgacagatcggcgaaaatcgacggg
ttttacatatatcaccggcgctctactacggtcagcgactatttgaaaaccactgtcgaa
ggaaagaacgcatctaacatgaccatttcccacttggatcctgacactacatatgaattc
aaggttcagagcttttctgtggacgcggggtcggaattttctcaaatattgcgacagaaa
acgaagaaaatcgtcgttgaacatccagttcaacaggtggtggcggaaaataaattaaaa
ccgaacgagagtaacaagaatgtcagcatacacatcatactcggcggagttttcggagcg
tcgctcattttaattgctctcgcttttgtggcgagatttttgtacaaaagagtgaaatgt
gcacaaaatcaggaatcacaaagtgaaggcaaaccgataacgaatggaagagtaatgaac
ggcggagtaacagactccaaaattaacattacatccaatccacttgccggtctcgacacg
tccgaggacataatgcagcctaagagcgggcaacagtcgtcgatggaaatgacgtcgttt
ctaaacggccagaacaacaatggcagcaacaacggtcataacaacggcgacgcagctgga
tctgacgtgaacgtcacgtcacatagcgagccgtcgtctctgcgccaagggccgctgcct
atcgaacaacgtttgtga
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