Cardiocondyla obscurior: 139103132
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Entry
139103132 CDS
T10704
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobs03021
]
139103132
03036 Chromosome and associated proteins [BR:
cobs03036
]
139103132
Transcription machinery [BR:
cobs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
139103132
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
139103132
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
Tex_central_region
SH2
HHH_9
HHH_3
Tex_YqgF
Spt6_S1
HTH_10
Tex_N
Motif
Other DBs
NCBI-GeneID:
139103132
NCBI-ProteinID:
XP_070513631
LinkDB
All DBs
AA seq
1730 aa
AA seq
DB search
MAEYLDSEADVSEGEEELDQNEKKKLRKLKAVEESDEEEEDDEDQLREELKDLIDDNPIE
ESEGEDSDGSNHHKKRKKSDDEDFDDRLEDEDYDLIEENLGVKLERKRFKRLRRIQDEES
EEEQEKEADEEKDAIANDLFEGSGDEDERRSERSHRPEAETFEEGSDEGEYTDADDFIVD
DDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYAEEDYEEEEEEEEDEYLDE
DADTERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIPERMQLRSVPV
TSVPEGSDELDLEAEWIYKQAFCKPTISIQDAHLNAEAKERARKGPQTIGKIKKALDFMR
NQHFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLSQRKENLLKLFEKMRTYQLDE
IMKNPDAPLPDTVRIIKDDDIERLKNVQTSEELSDVYNHFMLYYNHEIPIMQEAVRQKER
QARREERIQRRKQQIAEAEENGEDPPEEEDPLEEEDVDDTLKQAVRSGPYSICRKAGLDS
LAKKFGLTPEHYAENLRDNYQRHEVDQEPTEPTTIAIEYCSNARFQTAEEVLKAAQLMVA
IQLAREPLVRKCVREMYMERAKISIKPTKKGIKEIDENHPIYTMKYLKDKPVRDLVGVQF
LNLMTAEEDKLITISLSDSIEGNTSSNYVDEMKQLYCRDEFSKLVQDWNALRVGSVEIAL
NRMVIPHLKKELRTNLIAEAKECVMRACCRKMYNWIKVAPYSCEFPEEEDEEWDTSKGLR
VMGLAYVPDYSQAAFTCLIAADGECTDYLRLPHLMKRKNSHREDEKVMKEADLLALKNFI
STKKPHVVVVAGESREAMMIAADIKDCIANLTEEEQFPNIQVEICDNELAKIYSNSNKGN
SEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLKYHILQDQLPKEELLENLYL
EFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRLENRTQLVTA
CHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDED
ANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNSRYKDLRVLYQ
SPSAEKLFDLLTKETPETFYVGKLVLATVVGISHRKPQGDQLDQANPVRNEETGLWQCPF
CLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDRHVANPCERVGMG
QIIHCRIIKIEVDRFSVECTSKSSDLADKNHEWRPQRDPFYDTETEQRDIKVEEDAKKAK
QRQIYVKRVIVHPSFHNISFAETVKLMHTMKQGEAIVRPSSKGADHLTVTWKVTDDILQH
IDVREEGKENAFSLGQSLWIGSEEFEDLDEIIARHVNPMAAYASELLDFKYYKPTVEGIK
DKAEEILKDQKKENPSGIPYIVSAAKTYPGKFLLSYLPRTRCRHEYITVTSEGFRFRAQM
FGRLSDLLRWFKEHFRDPVPGQATPSTPRGAMTSRTPYNTTPGTVSGCPRVFFLPPHTPG
AASATGGYGGVHTYPNTPYTPSGQTPFMTPYQTPHHTPHHGQPTPRYGQQTSSHHQGPFV
HPPPPSMTPSHHRSAQSHRPTPPPPPISTPSGDPTDWKKAAEAWARLKSGPRVSGSTPRY
DESRKTPRNYDESRSRRTPSYKSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatctggactctgaggcagacgtgagcgagggtgaggaggagctggatcag
aatgagaagaagaaactgaggaaattgaaagcagtggaggaaagcgacgaggaagaggaa
gatgacgaagaccagttacgcgaggaactaaaagatttgatagacgataatcctatagaa
gaaagtgagggtgaagatagcgatggctctaatcaccataagaaacgtaaaaaaagtgat
gatgaggatttcgatgatcgcttggaagacgaagattacgatctgattgaagaaaattta
ggcgttaagcttgaaagaaaacgttttaaacgtcttcgaaggattcaagatgaggaatcc
gaggaggaacaggagaaagaagcagatgaagaaaaagacgccatagccaatgatttgttt
gaaggttctggtgatgaggacgaaagacgaagtgaacgaagtcataggccagaggctgaa
actttcgaggaaggcagtgatgaaggagaatatactgacgccgatgattttattgtggat
gatgatggcaggcctattgcagagaaaagaaagaagaagaagccaatattttctgacgca
gcattgcaagaagcacaagacatttttggcgttgactttgattatgatgaattcggtaaa
tacgccgaagaggattacgaggaagaagaggaagaagaagaagatgagtatttggatgaa
gatgccgataccgaacggccacgacgaccaaagaagcagttgaagaaaaagaccactaga
aagagtattttcgagatttacgagcctagtgaattaaaacgcggtcattttaccgatatg
gataacgagatacgtaatacagacataccagaaagaatgcaactacgatccgtaccggtt
acctcagttccggaaggttctgatgagctagacctcgaagcagaatggatttataaacaa
gcgttctgtaagcctacaatttctatacaagatgctcacttaaatgcagaggcaaaagaa
cgagcacgaaaagggccacagactattggcaaaatcaaaaaagccctggactttatgcgc
aatcaacattttgaagtcccttttatatcgttttatagaaaagagtatgtgttacccgag
ttaaacattaatgatttgtggaaggtttataaatttgatgcaaagtggtgtcagttaagc
caacgaaaagagaatctactcaaactattcgaaaaaatgcggacctatcaacttgatgaa
attatgaaaaatccagatgcgccgttaccggataccgtgcgaataattaaggacgatgac
attgagcgactaaaaaacgttcagacaagtgaagaactcagtgatgtttataatcatttc
atgttatattataaccacgaaattcctataatgcaagaagccgtacggcaaaaagaaaga
caggcgcgacgtgaagaacgaatccaacggcgcaaacaacagattgccgaggcggaagaa
aacggtgaagatccgccggaagaggaagatccactggaggaagaagatgttgatgacacc
ctgaagcaagccgttagaagcggtccgtattcgatttgtcggaaagccggtttagatagt
cttgcgaaaaaatttggactaacacccgaacattacgctgagaatttgcgagataattat
caacgtcacgaagtggatcaggagccgaccgaaccaacgacaattgcgattgaatactgt
tcgaacgcgcgatttcaaactgcggaagaagtgctgaaagctgctcaactgatggtggca
attcaattagcacgtgaaccgcttgtacgtaaatgtgtgcgagaaatgtacatggaacgc
gctaaaatatctataaaaccaacgaaaaagggcattaaagagattgacgaaaatcatccg
atttacacaatgaaatacttgaaagataaaccagtacgcgatcttgtgggtgttcagttt
ttgaatctgatgactgctgaggaggacaaacttattacgatctcactcagtgattctata
gagggtaacaccagcagtaactacgtcgatgaaatgaagcagctctattgccgagatgag
tttagcaaactcgtacaggactggaatgccttgcgtgtaggtagcgttgaaattgcgctc
aatcgcatggtgattccgcatctgaaaaaggaactacgcacgaatttgattgccgaagca
aaagagtgtgtgatgcgcgcatgttgtcgcaaaatgtacaactggattaaagttgcgcca
tatagttgtgagtttcctgaagaagaagacgaggaatgggatactagtaaaggtctgcgc
gtaatgggattagcttatgtgcctgactactcacaggcagctttcacttgtttaatcgca
gccgatggcgagtgtacggattatctacgtctgccgcatttgatgaagcgcaaaaatagt
catcgcgaggatgaaaaagtaatgaaggaagccgatttactggcactaaaaaactttata
tctacgaagaagccacatgtagttgtagtagccggcgaatcccgggaggcaatgatgatt
gctgctgacatcaaagattgcattgccaatttaacagaggaggaacagtttcctaatatt
caagtggaaatatgcgacaacgagctggcgaagatttattcaaatagtaacaaaggtaat
tcggaatttcgagattatccagaactattacgtcaggctatctcacttgcgagaagaatg
caggatccgctggtggaattctcacaattgtgcacggccgatgaagagattctctgcctc
aaatatcacatattgcaagatcaattacctaaagaagagttgttggaaaatctgtatctg
gagtttgttaatcgcgtaaacgaggttggcgtagatgtaaataaagcagttcagcaagca
tactgcggcaatcttgtgcaatttgtttgcggtctcggtccgcgaaagggtcaagcattg
atcaagatgttgaagcagacaaaccagcgattggagaatagaactcagttagttactgcg
tgccatatgggaccgaaagtattcattaattgcgctggtttcattaaaattgataccaat
agtctaggtgacagtactgaagcgtatgtggaagtacttgatggttcgcgcgtacatcct
gaaacttatgaatgggcgagaaaaatggcagtcgacgctctagaatatgacgacgaggac
gcaaatcctgctggtgctttagaagagatactcgagtcgccagaacgccttaaagattta
gatcttgacgctttcgcagaagaacttgagcgtcaaggctttggtaacaaatgtgttact
ttgtatgatattagagccgagttaaacagccgctataaagatctccgcgtgctatatcaa
tcgccgagcgcggaaaaattgtttgatcttctaacgaaggaaacgcctgaaaccttctac
gtcggtaaactagtgttagctactgtggtcggcataagtcatcgaaaaccgcaaggcgat
cagcttgatcaggcaaatccggtgcgaaatgaagaaactggtctatggcagtgcccgttc
tgcttaaaaaacgattttcccgagttatcagaagtgtggaatcactttgatgctggcgct
tgtccaggcaaggccactggtgtaagattgcgactagacaacggtatctcaggttatatt
cacatcaagaatttatcggatcgacatgttgcaaatccctgcgagagagtcggcatggga
caaattattcattgccgaattattaaaatcgaagtagatcgattcagtgttgaatgtact
agcaaaagcagcgatctcgctgacaaaaatcatgaatggagaccgcaacgagatccattt
tatgatactgaaaccgagcaaagagatataaaggtggaagaggacgcaaagaaggcaaaa
cagcgacaaatctacgtaaaacgcgtaatcgtccatccgtccttccacaatatcagtttc
gccgaaactgtaaaattaatgcatacaatgaagcagggtgaagcaatagtgagaccaagt
agcaaaggtgccgatcacttgaccgtcacgtggaaagttactgacgatatactgcaacac
atcgacgttcgtgaagaaggcaaagaaaatgctttttcattagggcaaagcctatggatt
ggcagtgaggaattcgaggatttagacgaaatcattgctcgacatgtgaatcccatggct
gcttacgcttccgaattattagattttaaatactacaagcccactgtagaaggaattaag
gacaaagcagaggaaatattaaaggatcagaagaaggaaaatcctagtggaattccttac
attgtatcggcagctaagacctatcctggaaagtttctactttcttatctgcctcgtact
cgttgccgccacgagtacattacagtgacatccgagggctttagatttcgtgcgcagatg
tttggtaggttgagtgacttgttacgctggttcaaggaacactttagggatcctgttcct
ggacaagcaactccgagtacgccacgtggtgctatgacttctagaactccttataatact
acgccaggaaccgtcagtggatgtcctagagttttcttccttccgccgcatactcctggg
gcagctagtgctactggtggctacggcggagtgcacacgtatccgaacacaccgtatacc
ccgtctggtcaaactccattcatgactccatatcagacgcctcatcacactccgcatcat
gggcagcccactcccagatatggacaacagacctctagccatcatcaaggacctttcgta
catccaccgccgccctcgatgacacctagtcatcatagatctgctcaatcgcacagacct
acaccaccaccaccacccatatctactccttctggtgatccgacagactggaaaaaggct
gctgaggcgtgggcacgtttaaaaagcggacctcgagtctctggatcgacgcctagatat
gacgaatccagaaaaactccgcgtaattatgatgagtcgagaagtagacgtactccttcg
tacaaatctccgcgaggtactccacatacgaattctagtccaagaagtatgtctcttagc
ggagatggtactcctctatacgacgaaagctaa
DBGET
integrated database retrieval system
