Cardiocondyla obscurior: 139103207
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Entry
139103207 CDS
T10704
Name
(RefSeq) vesicular integral-membrane protein VIP36
KO
K10082
lectin, mannose-binding 2
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139103207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139103207
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cobs04091
]
139103207
Membrane trafficking [BR:
cobs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
139103207
Lectins [BR:
cobs04091
]
L-type lectins
139103207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Lectin_legB
Laminin_G_2
TRIQK
Motif
Other DBs
NCBI-GeneID:
139103207
NCBI-ProteinID:
XP_070513779
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Position
LG06:5518343..5525186
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AA seq
324 aa
AA seq
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MGPISWFLLLAGIQGSLASDWNTKDFMKREHSLIRPYQGTGMTIPNWDFMGSTIVTNNYI
RLTPDLQSKQGALWNSVPCYIRNWELQIQFKVHGKGKDLFGDGFAIWYAKERMNSGQVFG
NQDYFKGLAVILDTYSNHNGQHNHQHPYISAMVNNGSLHYDHDRDGTHTQLAGCEAKFRN
VEHDTHIAIRYERDMLTVSTDFVNKASWKECFKVLDVKLPTGYYIGISATTGDLSDNHDI
LSIRLFELDLPDDPKDHEDRSQILPSAAHFEAPREHVQDSKQSSMSGIKLFLLMLVGALI
LIACVVIAIMFYQKHKENSRKRFY
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgggccctatctcgtggtttcttctactcgccggcattcaggggtccctcgcctcggac
tggaacacaaaggacttcatgaagcgggaacattctttgatcaggccgtaccaaggcaca
ggtatgacaatacctaattgggacttcatgggtagtacaatagtaactaataattatatc
agattaacccctgatttgcaaagtaaacaaggtgccttatggaattctgtgccatgttat
atacgaaattgggaattacaaattcaatttaaagtgcatggaaaaggaaaagatttattt
ggagatggttttgccatttggtatgccaaggaaagaatgaactcaggccaagtatttggt
aatcaagattattttaaaggattagcagttatacttgatacatacagcaatcataatggc
caacataatcatcagcatccttacatctcagcaatggtcaataatggatctttacattac
gatcacgatcgcgatggcactcatacacaacttgcaggatgtgaagcaaaattcagaaac
gtagagcatgatacacacatagctataagatatgagagagatatgctcactgtttccacg
gattttgtcaacaaagcatcatggaaggagtgctttaaagtattggacgttaagcttcct
acaggatattatattggaatttctgctaccactggtgatctgtctgacaatcatgatata
ttgtcgattcgtttatttgagttagacttaccagatgatcctaaggatcatgaagacagg
tcacaaattctgccatcagcagctcactttgaagcaccaagagaacatgtacaagattcg
aagcaatctagcatgagtggaataaaacttttcttgctaatgttagttggtgcgctcata
ttaatagcttgtgttgtcattgccattatgttttatcagaagcacaaagaaaatagcaga
aagcgattctactaa
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