Cardiocondyla obscurior: 139103314
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Entry
139103314 CDS
T10704
Symbol
Rfc3
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03030
DNA replication
cobs03410
Base excision repair
cobs03420
Nucleotide excision repair
cobs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139103314 (Rfc3)
03410 Base excision repair
139103314 (Rfc3)
03420 Nucleotide excision repair
139103314 (Rfc3)
03430 Mismatch repair
139103314 (Rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobs03032
]
139103314 (Rfc3)
03036 Chromosome and associated proteins [BR:
cobs03036
]
139103314 (Rfc3)
03400 DNA repair and recombination proteins [BR:
cobs03400
]
139103314 (Rfc3)
DNA replication proteins [BR:
cobs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
139103314 (Rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
139103314 (Rfc3)
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
139103314 (Rfc3)
DNA repair and recombination proteins [BR:
cobs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
139103314 (Rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
139103314 (Rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_14
AAA_22
RuvB_N
AAA_16
AAA_11
AAA_5
AAA_24
ResIII
DUF815
DEAD
AAA_30
AAA_19
AAA_7
PhoH
ATPase_2
TniB
Mg_chelatase
AAA_assoc_2
MCM
FtsK_SpoIIIE
bpMoxR
nSTAND3
RCF1-5-like_lid
NPHP3_N
AAA_3
NELF-A_N
AAA_25
TIP49
Motif
Other DBs
NCBI-GeneID:
139103314
NCBI-ProteinID:
XP_070513954
LinkDB
All DBs
Position
LG06:complement(3565567..3567172)
Genome browser
AA seq
320 aa
AA seq
DB search
MNLPWVEKYRPKTLDELISHETIIQTINKYIDENQLPHLLLYGPPGTGKTSTILACARKL
YTPNQFNSMVLELNASDDRGIGIVRDQILSFASTGTMYRSAFKLIILDEADAMTNDAQNA
LRRIIEKYTDNVRFCIICNYLNKIIPALQSRCTRFRFLPLEAEQIMPRLNHVIEAENLKV
TEDGKQALMTLSGGDMRKVVSVLQSTWLAYGIVNENNVYNCVGHPLPKDINTIVNWLLNE
PYDTCYQKIKELKLNKGLALQDILTEVHACVVKIDFPDAIFIDLLCKMADIEKRLAAGCR
DDIQLNALISAFYKARDIEV
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaccatgggtcgagaagtatcgtcccaaaactctggacgagcttatttcccac
gagacgataatccagacaataaataagtatattgacgagaaccagctgccgcatcttctc
ctgtatgggccaccggggacaggaaagaccagcactattctggcgtgtgcccgtaaactc
tatactccaaatcaattcaattcaatggtgctggaattaaatgcctccgacgaccgaggt
ataggtattgtgcgcgatcaaatcctgagttttgctagcaccggcactatgtacagatct
gcatttaaattaattattctggacgaagcagacgcgatgacgaatgacgctcagaatgca
ctcaggagaattattgagaaatatacggacaacgtgcgtttttgcattatatgcaactac
ctcaacaagatcattccagctttgcagtctcgttgcactaggtttaggttcttacctctt
gaggcagaacagataatgccgagattaaaccatgtcattgaagcagaaaacttaaaagta
acagaagatggaaaacaagcattaatgacattaagtggtggtgatatgaggaaagttgta
agcgtacttcaaagcacatggcttgcttacggcatagtaaatgaaaataatgtgtataat
tgtgttgggcacccgttaccaaaagatatcaatacgatcgtaaattggttgttgaacgag
ccttatgatacatgttaccaaaaaattaaagagttgaaattgaacaaaggactcgccctg
caagatatattgacagaagttcacgcctgtgtagttaaaattgattttcccgatgcgata
tttatcgacttactgtgcaaaatggcagacatagaaaaaagactggctgctggatgtcgc
gacgacatccaattaaatgctcttatatcagcattttataaagctcgcgatatcgaggta
taa
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