Cardiocondyla obscurior: 139103448
Help
Entry
139103448 CDS
T10704
Name
(RefSeq) zinc finger protein castor homolog 1 isoform X1
KO
K25209
zinc finger protein castor
Organism
cobs
Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobs03000
]
139103448
Transcription factors [BR:
cobs03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139103448
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
Motif
Other DBs
NCBI-GeneID:
139103448
NCBI-ProteinID:
XP_070514218
LinkDB
All DBs
Position
LG06:complement(8629150..8748429)
Genome browser
AA seq
1668 aa
AA seq
DB search
MSAVTSPYGPAEMLSDSVYNYATTRRGATDQDSDSQYEAQAQLQITSSIPSKPRNKRKNF
KPISSRMAEVSDESERDDDEADVVEESSSEVLEYERKTMLLPVDERSKQRLNNNEASPID
LSVATRPPSSDADDDSADSLRHKFIFEQLRSQKFYSPGAEARSPNSDSSERSGSGVLDAE
SSRLDDQDQFEDERANDVDGEIELERKPFEGMREYAESTMQELLAIYGLAGGELAKSVSR
QLPPTFLNPNVGQQAQAKIKIKEEKDASSMAPGSPPTPPHTPQSPQRALPSLGNLSQSCQ
TSNANSPNLQQQQQQPQHQSQQHQSQEQQHPMHAMANSPLSQILVQNPALAQLLHQNPAI
LSQNPQLAQLLQQNLQAHMGSVLFQNVKREESEDSRVPPTIASLTAMKVEAADPKVSALL
RQSMSPVADSLMSGSKTSVSQPVIDYSRYVRRYTSSQECNSTYCKELGCREHFHCLDCSG
RVFVKKEEMIRHFKWHKKRDESLQHGFMRYSPMDDCSEKHFGRVCPHNRKQTHYHCIHEN
CDKVYISTSDVQMHANYHRKDSAIIQEGFQRFRATESCATSYCQFVGQRTTHFHCRRLGC
RFTFKNKADMDKHKSYHIKDEQLSRDGFKKFMKSEACPFDQCRFSRVCNHIHCIRPHCSY
VLHSSGQLFSHKRKHERHESELAYRKYKQVTAVGGGIRPPGSWAPDELSAQGLSLSLNGE
SSNEGRGSPSYYSLDDSFQSASDLAMDLTAPTTTITAGGSSVTVDQQQQQQQQQQQQSQQ
LTAAELAYLVPAASDCACNAGREHHHCGLDRCGTTLKDPREVREHLKEHETQERITDAFF
EEGGCDDSCPYADKEKHYHCNWENCREVILATDKPFRRLQHYKIHEYSRQLNLSCSSHLS
PDVTLTHLTNIDAMFRRKRGRPPKNRVIEIWSGGDPATHTHDSPQAIFTSFKLPKPQTPN
LTTNILIDDREGSVSPSNSLGEPEGFTTFNSEGCPDTACALRLTKHHHCSQLRCHFSTDR
PDQLLMHSKDFHDNVDIPPGFAFYDKMIDCRLSGCHSNRINRHFHCTRPNCGYSFVRYST
MALHEKQHSSGHTSESCTQESNNQECQTQLQSLIQETKPRIQVKNTAELIEKHDESLTIE
QESRSIIEEKESELASPDSGKTTVVRAAGTYYPVSGPPSEPALPGVVLSMRTSVHPEPSV
MPSISSTSPHTLYGPEQSCSRPFCKLKRKNHYHCNACNQAFSELDRLVAHIAKHSTGAIL
SQQQHDMVSPSPNQLQHDYIAQLSQKHDFMSPNAQMAQNIQNFQSQMQRQMQQTLNQQSQ
SKDIKLEKPRCSIDIGVQNVPSIKREPSEIACRDEGNNTAMDSHENGQLAQPPIQPGNVQ
PTIPTSFELDLSHGFHFPSPAVMAAMNQQIALMNQGLPPFLQHGGMYAGAPGLMFAPGLT
PANFLPPTRDENPLVSLATNLNLSKQSLSPPDANSPEAKKQRLHHSMRMLKDEPVPEGYV
RFRFNEDCRYNHCGYREHQTHFHCMRQDCGYSFCDKTRFVQHTARHERLDTLMGGDFQQY
RANVPCGRAQCAYTSSLGSMQNKASHFHCLKCDFVCTDTNKVVAHRRQHAKLDSIAAAGF
QKFTPSQPCGAVQCQHSGKQTHYHCLQCQYAVLGLAQMSAHKYRHMDS
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgtaaccagcccgtatggccctgcggagatgctttccgactcggtctacaac
tacgcgacgacccgacggggcgccaccgaccaggacagcgactcccagtacgaggcccag
gcccagttgcagatcaccagcagcatcccgagcaagccccggaacaagaggaagaatttc
aagccgataagcagccggatggcggaggtctccgacgagtccgagagagacgacgacgag
gccgacgtcgtggaggagagctccagcgaggttctcgagtacgagaggaagacgatgctg
ctgccggtggacgagaggtcgaagcaaaggctcaacaacaacgaggccagtccgatagac
ctctcggtcgccaccaggccgccgtcctccgacgccgacgacgacagcgcggactctctc
aggcacaagttcatcttcgagcagcttaggtcacagaaattttactcccccggcgcagag
gcgagaagcccgaactccgactcgtcggagagaagcgggagcggcgtcttggacgcggag
tcgtcgcgcttggacgatcaggaccagttcgaggacgagcgggccaacgatgtcgatggc
gaaatcgagctcgagcgaaagcccttcgaggggatgagagaatacgcggagtcgacgatg
caggaactactggcgatctacgggctggcgggaggtgaactcgcgaaatcggtcagcagg
cagttgccacccacctttctcaacccgaacgttggtcagcaagctcaagcaaaaatcaag
ataaaggaggagaaagatgcctcctcgatggcaccaggaagtccacccacgcctccgcac
acgccgcaaagtccacagcgcgcacttccgtcactcggcaatctgtcgcagtcctgtcaa
acgtcaaacgcgaactcgcccaatttacagcagcagcaacagcagccgcagcatcaatcc
cagcagcatcaatcgcaggaacagcaacacccgatgcacgctatggcgaattcaccgctg
agtcagatcctagtgcagaatcccgcgctggcgcaactcttgcatcaaaacccggcgatc
ctgtcgcagaatccgcaactggcgcagctgctgcagcagaatcttcaggctcacatgggc
agcgtgctctttcaaaacgtgaagcgagaggagtccgaggattccagggtaccgccgaca
atagcgagcctgacggcgatgaaggtggaggcagctgacccgaaggtttccgccttgctg
aggcagagcatgtctccggtagcggattctctgatgagcggttccaagacatcggtatcc
cagccggttatcgattactcccgatatgtgagaagatacacgtccagccaggagtgcaac
agtacgtattgcaaggaactgggctgcagggagcacttccactgcctggactgcagcggc
cgggtgtttgtaaagaaagaggagatgatcaggcatttcaagtggcacaagaagcgggac
gagtccctgcagcacggctttatgaggtactcgccgatggacgattgctcggagaagcac
ttcggccgggtgtgccctcacaatcgcaagcagacccactatcactgcatccacgagaac
tgcgacaaggtgtacatatcgacgtcggacgtgcagatgcatgcgaactatcaccgtaag
gactctgccatcatacaggagggcttccagcggttccgcgccaccgagagctgcgcgacc
agctactgccagttcgtcgggcagcggaccacgcacttccattgccgtcggctgggatgt
cgattcacgttcaaaaacaaagccgatatggacaagcacaagtcttatcatatcaaggac
gagcaactgtcgcgcgacggtttcaagaagtttatgaagtcggaggcctgtcccttcgat
caatgccgcttctctcgcgtttgcaatcacatccactgcatacggccgcactgcagctac
gtcctgcactcctccggtcagctcttttctcacaaacggaaacacgaacgtcacgagtcg
gagctcgcttatcggaagtacaagcaggttaccgccgtgggtggcggcattcgtccgcct
ggatcatgggcgccggacgaattgagcgcccaagggttgtctttgagcctgaacggtgag
agttcgaacgagggcagaggttccccgtcgtactactccttggacgattcttttcaaagc
gcgagcgaccttgctatggatctcactgctcctaccacgactattacggctggcggaagt
tccgtcaccgtcgatcagcaacagcagcagcaacagcagcagcagcagcagtctcaacag
cttaccgccgccgaactggcctacctggttccggccgcctccgattgcgcttgtaacgcc
ggccgggaacaccatcattgcggcttagaccgctgcggtacgactttaaaagatccccgc
gaggtcagagaacacctgaaagagcacgagacgcaggaacgcataacggacgccttcttc
gaggagggtggctgcgatgacagctgcccgtacgcggacaaagagaagcattatcactgc
aattgggagaactgccgtgaagtgatactcgcgaccgacaagccgtttcgcaggctgcag
cactacaagattcacgagtacagtcggcaattgaatctctcttgttcgtcgcatctctcc
cccgacgttacgttgactcacctaacgaacatcgacgcgatgttcaggcggaagcgcggt
aggccgcctaaaaatcgtgtgatagaaatctggtcgggcggcgatcctgcgacgcacact
cacgactcgccgcaggcgatatttacgagcttcaaactcccgaagccgcaaactcccaat
ctgacgactaatatattaatcgacgaccgagaaggtagcgtgtcgccttcgaacagcttg
ggcgagcctgagggatttaccacgtttaattcggaagggtgcccagatacggcttgcgcg
cttagattgaccaagcaccatcattgttctcagctgcgatgtcatttttccaccgatcgg
ccggaccagttgctcatgcacagcaaggacttccacgacaacgtcgacataccgccgggc
ttcgccttctacgacaaaatgatcgactgccggctgtctggctgtcacagcaatcgcatc
aatcgacacttccactgcaccaggccgaactgcggatactcatttgtcagatactcgaca
atggcgctgcacgagaagcagcactcctccggccatacttccgagtcttgtactcaagaa
tcgaataatcaggaatgtcaaacgcaactacaatccttgattcaggaaacgaagccgaga
attcaagtgaaaaacaccgccgaactgatcgagaaacacgacgaaagtctgacaatcgag
caggaaagcagatcaataatcgaagagaaggagtccgagctggcgagtcctgatagcggt
aagaccaccgtggtgagggcggctggcacctattatccggtcagtggaccgccgagcgaa
cccgcacttccgggcgtcgtgctatccatgcgaacttccgtgcacccagaaccatcggtc
atgccgtctataagttctacctcgccacacacgctgtacggaccggagcagagctgcagc
aggccgttctgcaagttaaagcggaagaatcattatcactgcaacgcgtgcaatcaagcc
ttctccgagctggatcgcttggtcgctcacatagcgaagcactcgaccggcgcgattctc
agccagcagcagcacgacatggtcagcccgtcgcctaatcagctgcagcacgattacatc
gcgcagctgtcgcagaagcacgacttcatgtcgccgaacgcccaaatggctcagaacatt
cagaactttcagagtcaaatgcagcggcaaatgcaacagactcttaaccagcagtctcag
tcgaaggatatcaagttggagaagccgcgatgcagcatcgacatcggcgtgcaaaatgtc
ccgagcatcaagcgggagccgtctgaaattgcgtgcagagatgagggtaacaataccgcg
atggacagccacgaaaatggccagttagcgcaacctccgattcaacccggcaacgtgcag
cccacgataccgacgagcttcgagctcgatcttagtcacggctttcactttccgagtccc
gcggtgatggccgcgatgaatcaacagatcgccttgatgaatcaaggtctaccaccgttt
cttcagcatggcggtatgtacgccggtgcgcctggactgatgttcgcgcccggtttgacg
cctgctaattttcttccacctacgagagacgagaatcctctggtctccctggcgactaat
cttaatttaagtaaacaatctctgtcaccgccggacgctaattcgccagaagctaagaaa
cagagacttcatcattcgatgcgaatgctgaaagacgaacccgtgccggagggatatgtt
agattcagatttaatgaagactgcaggtataaccattgcggctacagagagcatcaaact
cacttccactgcatgcgtcaagattgcggctattcgttctgtgacaaaactcggttcgtg
cagcacaccgcgaggcacgaacggctggataccttgatggggggtgacttccaacaatat
cgagccaacgtgccgtgcggcagggctcaatgcgcttacacatcgtccctcggatcgatg
caaaacaaggcgtcgcattttcactgcttgaagtgcgactttgtatgcacggacacgaac
aaggtggtcgcgcatcgacggcaacacgccaagctggacagtatcgcggcggccggcttc
caaaagttcacgccgagccaaccgtgcggagctgtgcagtgtcagcattccggcaagcag
acgcattatcactgtctgcaatgtcaatacgcggtgctgggtttggcgcagatgtcggca
cacaagtaccgacacatggattcttaa
DBGET
integrated database retrieval system
