Cardiocondyla obscurior: 139103504
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Entry
139103504 CDS
T10704
Name
(RefSeq) piwi-like protein Siwi
KO
K02156
aubergine
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
139103504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cobs03036
]
139103504
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
139103504
piRNA pathway
139103504
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
Piwi_N
ArgoN
ArgoL2
Motif
Other DBs
NCBI-GeneID:
139103504
NCBI-ProteinID:
XP_070514350
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Position
LG06:complement(5285642..5293547)
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AA seq
858 aa
AA seq
DB search
MSKQEKGRGYDPSEPSTSSGHRKKPYDKDSNQSSSAREFKGVIKKIKREASPQPSTSSSS
YSEQHESKKVKSDVKSEVKKEDTEQSTSGRRGKSDILVTRPHDLETKRGTSGRPITLTTN
HFKLPTVPDWCLYKYRVDFEPEEERTFVRKGMVRFKKEEIGAYIFDGSILYATTSELNKI
HWKVPRKSDGIEIGITMRLVGKMTPDDGYYNVIFNIIMRKCLEYLKLQLVGRNYYDAKNK
SVVSQFRLELWPGYITTIQQHENNILMCAEIAHKVMRQETLYDILKGCYLRGGNYKEEFS
RNVIGIMVLTDYNNHTYRIEDVDYDASPSSTFPMRNGEHVSYQDYYYKKYEIEISEPTQP
MLVTRSKPKQRNAGEGDLVYLVPELCRATGLTDSMRENFHLMKALGAYTCLSPDARINKL
LKFNSRLREEPKVIQEFKDWNMTLDRSLVEVPGRVLPSSQLTFSKKYSINSGGGDWSRNM
QRIHLYNSKQLNNWLVFASERDRNAVNAFLGTLMQVSRQISFLVRNPQMVFLRDDRANTY
AGELENNLSRCTPELVFCVVSNNRNDRYSAIKKKCCLDRPVPSQVFLQKNLNGRNAMSIA
TKVAIQMNCKLGGAPWAVDNPLRGLMAIGFDVCHDVDTRGKDYLSMVATVDQTLTRYFSS
IIQFHSGEDLAEQLCTSVRKALMAYRAINQAYPMYLVIYRDGVSEGQIRNVWENEVGTLK
KKLEELYYGPNFKMIFIIVNKKINVRLFDHTRRTNPPIGTIVDDVITNPLKYDFFIVSQH
VRQGTVSPTSYNVISDNTGLTAEVVQCITFKLTHIYYNCSSTVRVPAPCHYAHKLSLLVG
RFLHRPPSTQLENQLFFL
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcaagagaaagggagaggttatgatccctccgagccatctactagcagcggg
catcgtaaaaaaccttacgataaagattcgaatcaatcgtcaagtgcaagagaatttaaa
ggagtaataaagaaaattaaacgtgaagcttctcctcaaccaagtacatcatcatcttca
tattctgaacaacatgaatcgaagaaagtgaaaagtgatgttaaaagtgaagtaaaaaag
gaagatacagaacagtcgacgagtggtcgacgtggaaaaagcgatattttggttactaga
ccacatgatttggaaactaaaagaggtacatctggaagaccaataacacttacgacaaat
cactttaaactacctacagtacctgattggtgtctttataaatatcgagttgattttgag
cctgaagaagagcgtacatttgttcgcaaaggtatggttagatttaaaaaagaagagatt
ggtgcatacatttttgatggttctattttatatgcaactacttctgaactaaataaaata
cattggaaggtcccgagaaaaagtgatggtatagaaattggaatcactatgcgtctagtt
ggaaaaatgaccccagatgatgggtattataatgttatttttaacataataatgcgaaag
tgtttagaatatttaaaattacaattggtgggccgtaattattatgacgccaaaaataaa
tcagtcgtaagtcaattcagattggaattatggcctggatatattacaaccattcaacaa
catgaaaacaatattctaatgtgtgcagaaatagcacataaagtgatgcgtcaagaaact
ctatatgatatattaaagggatgctatttacgcggtggcaactataaggaagaattttct
aggaatgtaattggaattatggtacttacggattacaataatcatacatatcgtattgag
gatgtggattatgatgcaagtccttcttcgacatttcctatgagaaatggtgaacacgtg
tcttaccaggattattattataaaaaatatgaaattgaaatatctgaacctactcaacca
atgttagtaactcgttcaaaaccgaaacaacgaaatgctggcgaaggagatcttgtttat
ttagttcccgaattatgtcgggctacaggtttaactgatagtatgagagagaattttcac
ctgatgaaagcattaggagcttatacatgtctctcaccagacgctcgaataaataaattg
ttgaaattcaacagcagacttcgagaagaaccaaaagttattcaggaattcaaagattgg
aatatgacgctagacagaagtttagttgaagttcctggtcgtgttttaccatcttctcaa
cttacattttctaaaaaatatagtattaacagtggcggaggagactggtcgagaaatatg
caaagaatacacttgtataacagtaaacaattaaacaattggttggtgtttgctagtgaa
cgcgatcgtaatgctgtaaacgctttcttaggtacgctaatgcaagtatctcgtcaaata
tctttcttagttagaaatccacaaatggtatttctacgcgacgacagagcaaacacgtat
gctggggaacttgagaataatctgagtagatgtactccagaattagtattctgcgtagtg
agcaataatcgcaatgatcgctactcggcgatcaagaaaaaatgttgtttagatagacct
gtgccatcacaagtctttctacaaaagaatttaaatggaagaaatgcaatgagtattgct
acgaaagtggctatacaaatgaattgtaagctaggtggagctccttgggctgtagataat
ccgttaagaggattaatggctattggttttgatgtatgccatgacgtagacaccaggggc
aaagactatttgtctatggtggcaactgtggaccaaacgttgacgcgatacttcagttct
attattcaatttcatagtggcgaagatcttgcggagcaactctgtacaagtgtacgcaaa
gctttgatggcttaccgcgccattaaccaagcttatcccatgtatctagtaatttatcgt
gacggtgtcagtgaaggtcagattcgaaacgtttgggaaaatgaagtcggaactttgaaa
aagaaactcgaagaattgtattatggtccaaatttcaaaatgattttcattatcgttaac
aaaaagattaacgttcgactattcgatcatacgagacgtactaatcctccgatcggtaca
attgttgacgatgttataacgaatccactcaaatatgactttttcattgtatcacaacat
gtcaggcaaggtacagtttcaccaacatcatacaatgttatctctgataatactggttta
actgcagaagtagtgcaatgtattacttttaaattaactcatatatattataattgctcg
agtactgtgcgcgtaccagcaccttgtcattatgcacacaagttatcacttttagtggga
cgatttcttcatcgacctccaagtacacagctggaaaatcagctatttttcttataa
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