Cardiocondyla obscurior: 139103566
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Entry
139103566 CDS
T10704
Symbol
Sno
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cobs03036
]
139103566 (Sno)
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139103566 (Sno)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
139103566
NCBI-ProteinID:
XP_070514494
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All DBs
Position
LG06:4250289..4259572
Genome browser
AA seq
1367 aa
AA seq
DB search
MATKKYDDGVSDDTSGSDFDDEEDPDKIEVPGGGKDLATAAVIGSIKDEKPVDLPSSPLD
KTDGALNELNQKFGNKIPGGLVTKTATPGYEMVRVGGSQSNPPGFVGTGQQVNQLNQLAG
GGYPNFPAGLSNLAGFNPAAFLQSSMDMNALMGSFMGMSGMNMGVNPFVQFLNQSGIHPN
WSGLSGKTVSQMWMNVGDPTKLMQPNIAEEEEVDDDEMGVAETYADYMPTKLKLGRKHPD
PVVETASLSSVEPTDVWYKVSIPEETIRSGALSALQLESITYASQQHEHLLPDGTRAGFL
IGDGAGVGKGRTIAGIIFENYLKGRKRAIWVSVSNDLKYDAERDLKDIGASKIEVHALNK
FKYAKISSAVNGNVKKGVIFSTYSALIGESSQSGGKYKSRLKQLLQWCGEDFDGLIIFDE
CHRAKNLCPTGSSKPTKTGLTVLELQNKLPKARVVYASATGASEPRNMAYMVRLGMWGEG
TPFPEFNGFITAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVAFKIEEVPLSKEFTKI
YDHSVRLWVEAMQRFQEAAELIDAENRMKKTMWGQFWSSHQRFFKYLCIAAKVKHAVSVA
REAVKCGKCVVIGLQSTGEARTLEQLERDDGELSDFVSTAKGVLQTLVEKHFPAPDRNRI
QRLLGLEPPKLKLDEDDLDGAGGSAGGSKRKPIRQAAQRATKKVRSWSSEEEISDEERNG
AHSSDSEYKISGTESDDDHRTEEESNASSDFNPFFSDSDSDVDPWDRRKKKGKKQKKPAK
KRLSTQDKIQSMLVHKQSNNKNKRNGDTANSGSMNATSGGLPNNQAPPRDAIERACSMKE
ELLAQIEILGERLPPNTLDQLIDELGGPENVAEMTGRKGRVVQREDGGIEYESRSEVDVP
LETLNLTEKQRFMDGEKTVAIISEAASSGISLQSDRRARNQMRRVHITLELPWSADRAIQ
QFGRTHRSNQVNAPEYIFLISDLAGERRFASTVAKRLESLGALTHGDRRATETRDLSQFN
IDNKYGRAALEATMKTIMGYEPPLVPPPQDYHGDFFKDVADALVGVGLICNSESTPGVLT
LDKDYNNMSKFLNRILGMPVDLQNRVFKYFTDTLNAIVTQAKKTGRFDMGILDLGTSGEN
VCRVRLFRFLRKHATGKAPTELHVVHVERGMSWTEVMNKFSELTGSKEGFYLSHQIRNGK
QTAVLAVIVDSGKKKSESKKDQFYMIYRPNTGLQLRQETLGELEKKYKKVSVDEAEPHWV
QQYEASVNTCSHAYWSGNCKNATLGIDCEVGLRRRSYNVLAGSVLSVWSRVENVLATRSA
HNSKMQVIRVRTDEGLKIVGTLIPKSCMESLRQALSSDAEKTEELTF
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaaaaaatatgacgatggagtaagtgatgataccagtggaagtgattttgat
gatgaagaagatcctgataagattgaagtacctggtggtggtaaagatcttgcaactgct
gctgtaattgggagtatcaaagatgagaaacctgtggatttgccatcaagtcctttggat
aaaacggatggggcattaaatgaattaaaccaaaaatttggtaacaaaattcctggagga
ttagtgacgaaaactgcaacaccaggttacgaaatggtgcgtgtaggaggctctcaaagt
aacccaccaggttttgttggcactggtcaacaagtgaatcaattgaatcagttagcaggt
ggtggttatcctaattttccagctggattatcaaatcttgcaggatttaatcccgctgct
tttcttcagtcaagcatggatatgaatgctttgatgggcagtttcatgggtatgtctggg
atgaacatgggtgttaatccttttgttcagtttcttaatcagagtggaattcatcccaat
tggtcaggactttcaggaaagacagtatcacagatgtggatgaatgtaggtgatccaaca
aaattaatgcaaccaaatattgcagaagaagaagaagtagacgatgacgaaatgggtgtc
gctgaaacttatgccgattatatgccaacaaaacttaaacttggacgaaaacatccggat
ccggttgtggaaacggcatctttgtcaagcgtcgaaccgacagatgtttggtacaaggtc
tctataccagaagagacaatacgatccggtgcgctttctgcgcttcaattagagtccatt
acatatgcttctcaacaacacgaacatctcttgccggatggtacacgcgccggatttctg
attggcgatggtgcaggtgttggtaaaggcaggactatagccggtattatatttgagaat
tacttgaaaggtcgaaaacgtgccatttgggtctcggtgtcaaatgatctcaaatacgac
gctgagcgcgatttgaaggacataggtgcatcaaaaatagaagtacatgctttaaataaa
tttaaatacgcaaaaatctcgtcagctgtgaatggtaatgtgaagaaaggtgtaatcttt
agtacgtattctgcattaatcggtgaatcgtcgcaaagtggtggaaaatataaaagtaga
ttgaaacaactgttacaatggtgcggcgaagatttcgacggtctgataattttcgacgaa
tgtcatcgggcgaagaatttgtgccctactggaagttcaaaacctactaaaacaggatta
acggtcttggaacttcagaataagcttccgaaagctagagttgtatatgccagtgcaact
ggcgcctctgagcctcgcaatatggcctacatggtacgattaggtatgtggggtgagggc
acgcctttcccggagttcaatggttttatcactgccgtggaaaagcgcggagtcggagcg
atggaaatcgtagcgatggacatgaagttgcgcggcatgtatattgctcggcaattgagt
tttcacggtgttgccttcaaaatcgaagaagtacctctttctaaagagttcaccaagatt
tatgatcattcagtgagattgtgggtggaagcaatgcagaggtttcaggaagcggcagaa
ttgatcgacgcagagaatcgcatgaaaaaaacaatgtggggccaattctggtcgtcgcat
caacgtttttttaagtatctttgtattgccgcaaaagtgaaacatgcggtgtctgtagct
cgcgaagcggtaaagtgtggtaaatgtgtggtgatcggtctacaatctaccggcgaagca
cgtactttggagcagttagaacgtgacgatggcgagctgagcgatttcgtttctactgca
aaaggagttttgcaaacgttagtggaaaaacattttccagcgccggatcgtaatcgtatt
cagcgtcttctcggtttagaaccaccaaaattaaagttggacgaggatgacttagacggt
gctggcggttccgcgggaggtagcaaaagaaaaccgattcggcaagcagcacagcgtgct
acgaagaaagtgcgttcttggtcatctgaagaagagatatccgatgaggagagaaacggc
gctcacagttctgattctgaatacaaaataagtggcactgaaagtgatgatgatcaccgc
acagaagaagaaagcaacgccagctcggatttcaatccgttcttcagcgatagcgattct
gatgttgatccctgggataggcgaaagaaaaaaggcaaaaaacagaagaaaccagcaaag
aaacgtttgagtacgcaggataaaatccaatcaatgctagtgcataaacagtctaataac
aaaaataaacgcaatggcgatacggcaaatagcggctctatgaacgcaacgagtggaggt
ttgcctaataatcaagcaccgcctagagatgctattgaacgggcttgcagtatgaaggaa
gaattattagcccaaattgagattctcggagagcgattaccgccaaatacattagatcaa
ttgatagacgaacttggtggaccggaaaatgttgcggaaatgacaggtagaaagggtcgc
gtcgtgcaaagggaagatggtggaatagaatatgaatccaggtcagaagtggacgttccc
ttagaaactctcaatttaacggaaaagcaaaggtttatggacggagagaagactgtagcc
ataatttccgaagcggccagtagtggtatatcgttacaaagtgacaggcgagctagaaac
caaatgcgacgtgtgcatatcacgctcgaattgccatggagtgcggacagagcaatacag
cagtttggacgtacgcatcgatcaaatcaagttaacgcaccggaatacatatttcttata
tcagatttagccggagaaagaagattcgcctcaaccgtcgcaaaacgtctggaaagtctg
ggtgcgttaacgcacggtgatcgtcgtgcaacagaaactcgagatctttcacaatttaac
atcgataataaatatggtcgagcagctttagaagcaacaatgaagactataatgggatat
gaaccgccgttggtaccaccgcctcaagattatcacggtgacttcttcaaagatgtggca
gatgctctagtaggcgtcggtttgatttgcaacagtgaaagcacacctggcgtactcacg
ctcgataaagattataataatatgtcaaagttcctgaatcgcattctgggaatgccagtt
gatctgcaaaatcgtgtgttcaaatactttaccgacacacttaacgccattgtgacacaa
gctaagaagaccggtcgtttcgacatgggtattctcgatctcggtacatcgggcgagaac
gtttgtagagtgcgacttttccgattcctgcgaaaacacgcgaccggtaaggcgccaaca
gaattgcacgtagtccatgtcgagcgcggtatgagctggaccgaggttatgaacaaattc
tcagagttgactggaagtaaggagggtttctatctgagccatcaaatccgtaatggcaaa
caaacagccgttcttgcagttatagtggacagcggcaagaaaaaatccgaaagcaaaaaa
gatcagttttatatgatatacagacctaatacaggtttacaattacgacaagagactcta
ggcgaattagagaaaaaatacaagaaagtgagcgtagacgaggcggagccacattgggta
caacagtacgaggcctccgtaaatacatgttcgcacgcatattggagcggcaattgtaaa
aatgccactcttggtatagactgtgaagtaggactaagaagacgttcctataatgtatta
gccggttcagttttgagcgtttggagtcgcgtggagaacgtgctcgccacacgatccgct
cataactctaagatgcaagttatacgagtgcgtacagatgaaggattgaaaattgtcggg
acgcttattccgaaatcttgcatggagtcgttgcgccaagcactttcttctgacgcagaa
aagacagaggaactgacattttaa
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