Cardiocondyla obscurior: 139103738
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Entry
139103738 CDS
T10704
Symbol
Atg16
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04136
Autophagy - other
cobs04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139103738 (Atg16)
04136 Autophagy - other
139103738 (Atg16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139103738 (Atg16)
03029 Mitochondrial biogenesis [BR:
cobs03029
]
139103738 (Atg16)
Membrane trafficking [BR:
cobs04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
139103738 (Atg16)
Others
Specific organelles associated proteins
Auto phagosome
139103738 (Atg16)
Mitochondrial biogenesis [BR:
cobs03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
139103738 (Atg16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
CCDC89
Beta-prop_RIG_2nd
CCDC18_2nd
Beta-prop_Aladin
Beta-prop_EML
ANAPC4_WD40
CCDC113_CCDC96_CC
WD40_MABP1-WDR62_2nd
UCH
Nucleoprot-TPR
UCP007778
Beta-prop_WDR36-Utp21_2nd
RMC1_N
Beta-prop_WDR36-Utp21_1st
CCDC186_middle
Beta-prop_WDR90_POC16_2nd
Cluap1
DUF6594
DUF4407
HbrB
ODF2_C
Motif
Other DBs
NCBI-GeneID:
139103738
NCBI-ProteinID:
XP_070514818
LinkDB
All DBs
Position
LG01:complement(6632528..6829196)
Genome browser
AA seq
372 aa
AA seq
DB search
MTSNEAAGSLGVIREDVNWRKDLISQLRERNRSQTSCFADLISLHNRLFDNTNTLRNTNM
QLTIANETLRREAANGSIGTCGNSDLEARLLKQAEELAMLHKRKGEHTQQIVDLNNKLQE
MTKELQAKETSLAENSEANANLRLEITKCLAREKDLEGINQMLKDEHQALQLAFASLEEK
LRKAQEENRQLIERLIKYKARDAEKMNEENDNFLSFTSPTAFLMHTLSKFGKRQAKMQKE
LEDAARDTRPVSPDRLSLKEVAGLPTAVPTKVSVTFSAHEGEVYAVKWSPTDRILATGGA
DRKVKLWNITKDTSENKGILVGSNAGVMSVDFDSTGTLILGASNDYASRVWTVSDLRLKV
SLQMLRIICLEN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgaacgaagcagccggctcgcttggagttattcgggaagatgttaattggcga
aaagatttaatttcgcagctacgcgaaaggaataggtcgcaaacgagctgcttcgcagat
ctcattagcctacataataggttatttgataatacaaatacactgcgaaatacgaatatg
caattgacaatagcaaatgagactttacgtcgcgaagcagccaacggtagtattggaact
tgcggaaattccgatctcgaagctagattattaaagcaagcggaggaattagcaatgcta
cataaaagaaaaggagagcacacgcaacaaatagtagatcttaataacaaattgcaagaa
atgacaaaggaacttcaagcaaaggaaactagtcttgcagaaaactcggaagctaatgct
aatttacgtttagaaataactaaatgccttgctagagagaaagatttggaaggtattaac
cagatgctcaaggatgaacatcaagctttgcaacttgcttttgcatccttggaagaaaag
cttagaaaggcacaggaagaaaatcgacaactgattgaacgattaataaaatataaagcc
agagatgcagaaaagatgaatgaagaaaacgataatttcctaagttttacgagcccaaca
gcctttttgatgcataccttatcaaaatttggaaagaggcaagcaaaaatgcaaaaggaa
ttagaagatgcagcacgagatacgcgacctgttagtcctgatcgtttaagcttaaaagaa
gttgctggtcttccgacagcagtgcccacgaaagtatccgtaacgtttagtgctcatgag
ggggaagtatatgctgttaaatggtcgcctactgatagaatattggctactggtggtgct
gacagaaaagtgaagctttggaacattaccaaagatacgtcggagaacaagggaattctc
gtcggcagcaacgccggggtgatgtcagtggacttcgattcaacaggcactctcattctc
ggagcatccaacgattatgcgagccgcgtctggaccgtcagcgatcttcgtctaaaggta
agtctacaaatgttaaggattatatgcctggagaactag
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