Cardiocondyla obscurior: 139103844
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Entry
139103844 CDS
T10704
Symbol
Atg17
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139103844 (Atg17)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cobs01009
]
139103844 (Atg17)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139103844 (Atg17)
03029 Mitochondrial biogenesis [BR:
cobs03029
]
139103844 (Atg17)
Protein phosphatases and associated proteins [BR:
cobs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139103844 (Atg17)
Membrane trafficking [BR:
cobs04131
]
Autophagy
Autophagosome formation proteins
ULK complex
139103844 (Atg17)
Mitochondrial biogenesis [BR:
cobs03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
139103844 (Atg17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
Ig_NUP210_15th
DUF6664
Motif
Other DBs
NCBI-GeneID:
139103844
NCBI-ProteinID:
XP_070515002
LinkDB
All DBs
Position
LG07:complement(1507283..1535724)
Genome browser
AA seq
1461 aa
AA seq
DB search
MLYIFHVDTGSIVTFDIKLALQSVSQLMEAIERECGVAIANQVLLMSGGECLEPHARVCS
YSAGTDTNPIYLFCKAAIESAFPPTPSIDYGSDVDLQTQIDNSLAMPATLHTLCARAHLA
QQCCGLAREQTRICEKLVHDQHLQQQGWAAVVANLEDITHMFQLRAEQFQQAFVLYLGER
QRHMKLLDNFNADLGTLAKIPILPALRAHAEGSPSPDDQPSQTSETTSEDSGEVLNLLRW
ISAKDNQSSLEQVADQCSRGLEQFDERLMQSLEAEVNAAVDNANKQDMKEIKGLGERLFA
LEQLMVQNKKLVHEQGELAQGFLQNQNRASNLGDASVLPDLCNSHRRQLQVMLQNHNQLR
DIRRRCTKAKEELSINIYHRLKWIMYVENKMVEVGNKLIIYHESLKRLRRHLEVLQQIHL
APEIYMSAVVEVVRRRTFSQAFLVWARNLACQLLTVHSEELARRREFQSKFDGHFLNTLF
PGLEDTPPSFATEAPSDFDNALPNITANDMETLRSQLPDLALAISTPDLSGITQFFLSKS
FTEGSTDGNKDKPTTSGSTDILTKEQERTRAPLLSDRGDFESETDTEEFEKIGQAGVDVS
KPGVFDGAKQKRQKQLEVGASRSVSPASSTSTNVSPLNSKVADLTTRSSTSSEPGSFQFP
SLSATSERPAQLSPLTECVENGAADSSICLLRSGVNGLSNYRGALPPEEQHSPSPNPPSL
PQSSVMCDDQQQQHQHPLSGSGGSSPSVGVGATDFMGTEFYMDESLPSSLSEHPADGQHQ
AIVSLLQENLGNTREEVERLRSILKTMKVVVCDELSSVRNELAVLRDRSNEDKSGIVELT
ERVRVALSLHSQEYDRRLQEREQELTIEHEYKITDVKKLMQNREEEICTLKRNLLEKETE
LAEHERLVSTMHQKLEEEEIEKRSLQTRLHQQLEDYSRILEQARIDKEEAVKKTNDERFL
EITSLTNSLTQCQKRIQELEENLASVRTDQERMVKEATDKLQIEYKTELETIRSRFKLMT
ASTMERSPSDSSLEKIERPDVIELVNHEAILAQAREDMKIESAMAVRTAIVKERADCMEK
LDNELKLAKEVVEEKNKEIEMYRARTTALIEQSKHYKNMIDRLIKDFKIKSEKQHNLMEK
MKSLETSKAWLESQEITEKAIRTVLEQHEDIAYPLESGVCKDLSYNRLASGHIDSESVFK
ESEKYDVEVSESKKVRLEADDDDLARLSRRLESLENDNKRLSCELNSIRASKVAAEAKME
ALMTDKIRLELELLKERTKKSFNFDPIPSESRDKDMSASVAVVSDSTSRDAASSSQPSRR
SSSKSICFHPSFPSYIHKKVAEKVTKMVQQGIVTITSCNPGDIVLVVWDEAHANYAVYQE
SSTYYFLHSDYTEALDEQNQGTSRKCVLAEVIEKEYCHARKPENRYRVPRGTKFYRVRAT
PRDTRALIDETGSMSKSQQLP
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgctttacatctttcatgtcgacaccggcagcatcgtcaccttcgacatcaagctggca
ctacagagtgtcagccagctgatggaagcgatcgagagggaatgtggcgtagcgatagcg
aatcaggtgctgcttatgagcggcggcgagtgcctggaaccacatgcacgtgtgtgctcc
tactcggctggaaccgacacgaatccgatctatctgttctgtaaggccgctattgagagt
gctttcccgcccacgccgagtatagactatggttccgacgtcgatctgcagactcagatc
gacaactcgctggcgatgccggccacgttgcacaccctttgtgcccgtgcccacttggcc
cagcaatgctgcggtcttgcgcgagagcagacgaggatctgcgaaaagttggttcacgat
cagcatctccaacagcaaggctgggccgcggtagtcgccaatctcgaggacatcacgcac
atgtttcaattgcgtgccgaacagttccagcaagcctttgtcttgtacctcggcgaaaga
caacggcacatgaaactcctggacaattttaacgccgacttgggtactcttgcaaaaatt
ccaattttaccggccttaagagcccacgctgaaggctcgccgagtccggacgaccagccc
agtcaaacgtccgaaaccacatcggaggatagtggagaagtactgaatttgctacgatgg
atctccgcgaaagacaatcagagcagcttggagcaagtggcagatcaatgctcgcgtggc
ctggagcagttcgacgaacgattgatgcaaagcctggaagcggaagtgaacgcagcggtt
gataatgctaacaagcaggatatgaaggagataaagggcctaggtgagaggctgtttgcc
ctggaacaactgatggtgcagaacaagaagctcgttcacgaacagggtgagctcgctcag
ggctttttgcagaatcagaatcgcgcaagcaacttaggcgacgcgagcgtcctgccagat
ctttgcaattcccatcgacgacaattacaagttatgctgcaaaatcacaatcaattgcgc
gacattcgccgtcgatgcacgaaagctaaggaggaattgtcgatcaatatttatcatcga
ctgaagtggataatgtatgtggagaacaaaatggtcgaagtgggcaataaactaatcata
tatcacgagagtttgaagcgactgagaaggcatttggaagtccttcaacagattcacttg
gctccggaaatatatatgagcgcggtggtcgaggttgttagaagacgcactttctcgcag
gcctttctcgtatgggcaagaaacttggcgtgtcagctgttgactgttcacagtgaagag
ctagcacgtagacgagagtttcagagtaaattcgatggccacttcttgaacaccctcttc
ccaggcttagaagacacaccaccgtccttcgctacggaagccccttccgatttcgacaac
gcattacctaatataacggcgaatgatatggaaacgttaaggtcacagcttccagacttg
gcgcttgcaatttctacgccggatttaagtggcataactcagttttttttatctaagagc
tttactgaaggcagtaccgatggtaacaaagacaagcccaccacgtcggggagcaccgat
attctcacaaaagagcaagagcgcactagagcgccattattatccgacaggggtgatttt
gaatctgaaactgatacggaggaattcgagaagatcggtcaagccggcgtggacgtgagc
aagcccggcgtgttcgacggggcgaaacagaaacggcagaagcaattggaggttggtgcc
tctcgaagcgtgtcccccgcttcctcgacctcgactaacgtctccccactaaactcgaaa
gtcgcggatctaacaacgcgttcgtctacgtcaagcgaacccggctctttccaatttccc
agcctgtccgccacgagcgagcgcccggcacagctaagtccgctgaccgagtgcgtggag
aacggcgccgccgattcttccatctgcttgcttcgcagtggcgtgaatggcctttcgaac
tatcgcggcgccttgccgcccgaggagcaacattccccgagtccgaatcctccttccttg
ccacagtcctccgtcatgtgcgatgaccagcaacagcagcatcagcacccactgtccggt
agcggtggtagcagcccctccgtcggcgtgggtgccaccgacttcatgggtactgagttt
tacatggacgaatctctgccgagcagcctcagcgagcatcccgccgacggccagcatcaa
gctatcgtgtccctccttcaggaaaatcttggtaacacgcgtgaggaagtggagagattg
cgctccatcttgaagaccatgaaagtggtcgtatgcgacgagctcagttctgttcggaat
gaattagcggttctacgagatcgatctaacgaggataagagcggcatcgttgagctgact
gaacgcgtccgagtggcattgtccttgcattcgcaagagtatgaccggcgtcttcaagaa
cgcgagcaggaattgacaatcgagcacgagtacaaaataaccgacgttaagaaattaatg
cagaatcgcgaggaagagatttgcacgcttaaacgcaaccttctggaaaaggagactgaa
cttgcggaacatgagcggctggtgtctacgatgcatcagaaattggaggaagaagagatt
gaaaagagaagcttacaaactcgtttgcatcagcagcttgaggactattcgaggatattg
gagcaagcgcgcatagataaagaagaggcggtgaaaaagacgaatgatgaaagatttctc
gaaatcacttctttgacaaactcgttgacgcaatgtcaaaaacgaattcaagaactggag
gagaatctagctagtgtgcgcaccgatcaggagagaatggtgaaagaagcgactgataag
ctgcagattgaatataagacggaattagaaaccattcggagccgcttcaaacttatgacc
gcttctaccatggaaaggagccccagcgattctagtttagaaaagatcgaacgaccagat
gttattgagctcgtaaatcacgaggcgattctagcacaagcgagggaagatatgaaaatt
gaaagcgccatggctgtccgtactgctattgtaaaagaaagggccgattgtatggaaaaa
ttggacaacgaattgaaattagcgaaggaagtcgttgaagaaaagaataaggaaatagaa
atgtacagggcgagaacgactgcgttgatcgaacagagcaaacattacaagaatatgatc
gatcgactgattaaagattttaaaattaaatcagaaaagcaacataacttgatggagaag
atgaaaagtcttgaaacaagcaaagcatggttggagagccaagaaatcacagaaaaggca
atacgaacagtcttggaacaacacgaggacattgcatatcctctcgaatctggagtatgc
aaggacttgagctacaatcggttagccagtggtcacattgattcggaaagtgtttttaaa
gaatccgaaaaatatgacgttgaagtctcagagtcgaagaaagtacggttggaagctgat
gatgacgatttggctcggctatcgaggcggcttgaatctctcgagaacgataacaagaga
ctgtcttgcgaattaaactcgatacgcgctagtaaagtggcagctgaagcaaaaatggag
gctttaatgacggataaaatccgtttggaacttgaattactgaaggagcgaaccaagaag
tcatttaatttcgacccgataccgtcagaaagtcgcgataaagatatgagtgcgtcggtg
gccgtagtttcggactctacttcgagggacgcggcttcaagttcacagccgagtcgacga
tcatcttccaaatcaatatgcttccacccttcttttccctcgtatatacataagaaagtc
gcggaaaaagtgacaaaaatggtacaacagggaattgtcaccattactagttgcaatccc
ggcgacatagtgctcgtagtctgggacgaagcacatgccaattacgcggtgtaccaagaa
tcttcaacttattatttcctgcattctgattacactgaagcactggatgagcaaaatcag
ggaacttctcggaaatgcgttctcgctgaagtaatcgaaaaagagtactgtcatgcaaga
aagccggaaaatcgttatcgcgtaccgcgcggcacgaaattctatcgagtgcgcgctacg
ccgcgagatacacgtgcgctgatagacgagacaggttcgatgtcaaagagtcaacaacta
ccgtaa
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integrated database retrieval system
