Cardiocondyla obscurior: 139103881
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Entry
139103881 CDS
T10704
Symbol
Roq
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobs03000
]
139103881 (Roq)
04121 Ubiquitin system [BR:
cobs04121
]
139103881 (Roq)
Transcription factors [BR:
cobs03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
139103881 (Roq)
Ubiquitin system [BR:
cobs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139103881 (Roq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_UBOX
zf-CCCH
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf_CCCH_4
Vesi_VP2
Prok-RING_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
139103881
NCBI-ProteinID:
XP_070515077
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All DBs
Position
LG07:5894857..5904954
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AA seq
980 aa
AA seq
DB search
MPIQAPQWTEFLSCPICCHDFDVALRGPISLGCGHTICRACLANLHRKQCPFDQSIINTD
IEKLPVNEALLQLLGNPIPAVPSSVSASSQQQNYQKLLPVDQHANYLRAKSCIEELALYL
KPCQTTNTTGIGSGGGGLVSRPMQRKLVTLLGCQLVEPEGRARALRAARSLGERTVTELI
LQHQNPQQLSANLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRL
EPHFPQASKTSIGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQI
ATEAGLRIAPDQWSALLYGDTAHKSHMQSIIDKLQTPQSFAQSVQELVIALQRTPDPGQL
SGLRPQLELLAAIDPSPETEPPSLTECRAALEAVRIVVATLVDFVRQHGTSVTCSSNRKS
AAQDNGGGTPGGGSCPGSASGKYKVSMCRDLALRGTCPRSNNCTFAHSDSELDKYRSKNR
KLSVRANSNQTESKGEKNNKIFNKQNGDLTTYHSTKTHDRETVMQHSTPVPTNLENNLID
SLTSTYMLPLTPPQNLPHLSLCSVKGGPVIDNGGSPGVHCSGHYIMPPGSVPTVDYGPSL
TTASNHGVWDTPQIVPTNQRTAVAKTMLAVLLQRRMEILNQLEIIVGKQQQQQQQQQLIS
PQIKTENDLLTTPNNYSIWAAANNFRCSSGTDLSPPPPPATHLLEDDNLFMSPLDVSPSL
PQVGKQGPISRLSKTLIRSPYNGTLQHLYNEGVEPTPISALPTAFRTPNSVTSWYYGNQP
YTSVGMNGIQSVTPTNTISGDNDSGFTGDNYVALSRNIITPELSQFSRSDCMSKDLILES
QKVKQQLKHLEKKINDLKLATQGATTFVTAGERLTQELRMIEAGIRERERDVRNWSNPYG
NGTGTTTIPWIQQSPNDWLSNQIINNTDYKTEEEDTYEAGLANDMRELELRWEFELREQE
KHWSSGEKDTVTTTTTSKSK
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgccgatacaggcaccacagtggactgaatttttgtcatgtccaatttgctgccatgac
tttgatgtggctttgcgaggcccgatatcacttggttgtggccacaccatatgtcgagct
tgcttggccaatttacatcgcaagcagtgtcctttcgatcaaagcattatcaacactgac
attgagaaactacctgtaaatgaagcattgttacaattgctgggcaatccaatacctgca
gttccctcatcagtatctgcatcaagtcagcaacaaaattatcagaaacttctaccggtc
gaccaacatgcaaactatttaagagctaaaagttgtatcgaagaacttgctctttatctt
aaaccatgtcaaactactaatactacaggtatcggaagtggtggtggggggttggtgtca
cggcctatgcaacgcaaattggtgacgttattaggttgtcagttagtagaaccggaaggc
agagcacgtgcattgcgtgccgctcgaagtttaggtgaacgaaccgtcacagaacttata
ctgcaacatcagaatcctcagcaactcagcgctaatctttgggcggccgtgcgcgcccgt
ggttgtcaatttcttggaccagcgatgcaagaggaagttctgaaactcgtactattagct
ctggaagatggctccgctttatcgcgtaaagtgttggtaatgtttgtggtacaacgtttg
gaaccacattttcctcaagctagtaagaccagtattggacacgtagtgcaacttttatat
cgggcgagttgttttaaggtatcgaaacgtgaaggtgattcatcgttaatgcaattgaag
gaagaatttcgcacttatgaagctttaagacgagaacatgacgcacaaattgtgcagata
gctacggaggcaggtttgcgtattgcgcccgatcaatggtcagcactactttatggtgat
actgcgcataagtctcatatgcaaagtattattgataaattgcaaacgccacaatcgttt
gctcaaagcgtccaagagcttgtaatagcgttgcaacgtactcccgatcctggacaacta
agcggtcttagacctcaattggaactgttagctgccattgatcctagtccagaaacagaa
ccaccgagcttgactgaatgtcgggcagctttagaagctgtaagaatagtagtagctaca
ctggtggattttgttcgacaacatggaactagtgtcacatgcagtagcaatcgaaaatcg
gcggcacaagataacggaggtggcacacccggtgggggttcttgtccgggttcggcgtcc
ggaaaatataaagtcagcatgtgtagagatctagcactgcgcggaacttgcccacgttct
aataattgcacttttgctcatagcgacagtgagctcgataaatacagatcgaagaatcgg
aaattaagtgtcagagcaaattcgaatcagacggaatcgaagggtgagaagaataataaa
atttttaacaagcaaaacggtgatttaacgacttaccattccactaagacacacgacagg
gagacggtgatgcaacattcaacgcctgttccaactaacttagaaaataacttgattgac
tcattgacatcaacctacatgttgccgcttacacctccgcaaaatttaccacatctcagt
ttgtgctctgtaaagggaggacctgtgatagataatggaggctctcctggtgttcattgt
tctggacattatataatgccaccgggatccgttcccactgtcgattatggaccttcattg
acaacagcatcgaaccatggagtgtgggataccccacaaattgtaccaacaaatcaacgg
acagccgtcgcaaaaactatgctggcagtgttattacaacgcagaatggaaattttaaat
cagctagaaataattgttggcaagcagcagcagcaacagcaacaacaacaattaatatca
ccacaaataaaaacggaaaatgatttattgactacacccaacaattattcgatatgggct
gcggcaaataatttccgctgttcatccgggactgatttatcaccgccgccacctcccgct
acacacttactcgaagatgacaatctttttatgtctccgttagacgtatctccctctttg
ccgcaagttggcaaacagggtcccatttcaagactatctaaaactctgataagatctccc
tacaacggaactttgcaacacctctataatgagggagttgaacctactcctatttccgca
ctgcctacagcattcagaactccaaattctgtaacttcctggtattatggcaatcaacca
tatacatctgtcggcatgaatggaatacaatcggtgacaccaacaaacactattagtggt
gacaacgacagtggttttaccggtgataattacgtcgcgctcagccgtaacatcattaca
ccagaattatcacagttctcgagatcggattgtatgtcaaaggatttaattttggagtcg
cagaaggtaaagcaacagcttaaacatttagaaaaaaaaatcaatgacttaaagttagct
acgcagggagctactactttcgttacagcgggcgagcgattgacgcaagaattgcgaatg
attgaagcgggtatcagagaaagggagagagatgtacgaaactggagtaatccatacggc
aatggtaccggtacaactacgattccttggattcagcaatctcctaatgattggttatca
aatcaaataataaataacacggattacaaaactgaggaggaagatacgtatgaggctgga
ctagcgaacgatatgcgcgaattagaattacgatgggaatttgagctacgcgaacaagag
aaacattggtccagtggtgaaaaggacaccgtcactactaccactacctccaagagtaaa
taa
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