Cardiocondyla obscurior: 139104094
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Entry
139104094 CDS
T10704
Symbol
Zn72d
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cobs03041
]
139104094 (Zn72d)
Spliceosome [BR:
cobs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139104094 (Zn72d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
DUF5558
Motif
Other DBs
NCBI-GeneID:
139104094
NCBI-ProteinID:
XP_070515412
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All DBs
Position
LG07:complement(2338826..2347172)
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AA seq
989 aa
AA seq
DB search
MAQNNYFGFTHGGTQYGATSAAAYQTGQAGYAVTPAATAATYTQRPAAAAATGYETYQAA
AAAAATGTTYAAAANPGTVAQTYDYGYGRAAPAATYDATKTYYQQPAAAAATYTTTETHY
QAAKPAYSTTSAYTGTARQATTTGQAKTYQASSTAYQQSNPTQSATYSSGYTAPATPAAT
PSTATNKTASTTYSGYDAALYSAATMYVAQQSANSNSTNQKTGGWQGYGRKGFGAGGGGM
KAMRPKQPPKPQQLHYCDVCKISCAGPQTYREHLEGQKHKKKEASLKVPQQPPARGAGNS
LRCELCDVTCTGNDAYAAHIRGAKHQKVVKLHTKLGKPIPSADPTVLNPKPAAAAKAAAT
KKSTVTATPKINFVASGNLGTVNQNQTAEIKQEEPVAEETVEEAAVDERDIQPVGQEYIE
ENKSEDGKIISFNCKLCECRFNDPNAKDMHMKGRRHRFAYKKKVNPDLVVDMKPSLKQRK
MLEEKLRRQQMRDEYLRRREEINQLGPMGPMMDEEMMYWEERRRYEEECEYYEWYRRYGR
GPGAPPIPRPFQGPPPIMMFPGPQRRPDSSDDKHVLAHHTTIYPKEQELLAVQKIVSHTE
KALKFVSDALAEASKKNTPANANAVTAATVPAGTPQVNTDIVKKEEVDKKKAITPQKEDG
SDGNLFSFQKEKEDSRILRGVMRVGNLAKGLLLSGDNHVCLVVLCAEKPTRTLLNKVAEI
LPGELKNVAPEETYNVGKHPESAALTVSGGTVTVSVTLTSPLMRETPKSAVTADNAGQQQ
QEAAQLQTTPAAPTVTKPDPPDVLPKAKCLEALAALRHAKWFQARATSLQSCVMVIRIMR
DLCNRVPTWGPLNPWALELLTEKVISTAGGPLSPGEALRRLLECVAGGILLPGSPGLSDP
CEKEPVDAIGNMTSQQREDITASAQHALRLVAFRQIHKVLGMEQLPPPKFKGRFARKRRR
DNSNGEGTDSEASKKDKKAEEIKMETDSK
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaacaattatttcggctttacccacggcgggacgcaatatggggcgaccagc
gccgccgcataccagaccgggcaggctggatacgcggtaaccccggcagcaaccgctgcc
acgtacacccagcgacctgccgccgcggccgcgaccggctacgagacctatcaggcagcc
gcagcagcagccgcgactgggaccacgtacgcagcagctgctaatccgggcactgtagct
cagacttacgattacggctacggacgagctgcaccagctgctacttacgacgcaaccaag
acttattaccaacaaccagcagctgctgcagcaacttataccacgactgaaacacactat
caagctgcaaagcctgcttatagtacgactagtgcttatactggcactgctagacaagct
actactactggacaagctaaaacttaccaagcatccagcactgcttatcagcaatcgaat
cctacacagagcgctacttattcgtcaggatacacggccccagctacacccgccgctact
ccatcaacagcaacaaacaaaacggcgagtacaacgtattccggctacgacgcagcgcta
tatagcgctgcgactatgtatgtagcccaacagagtgcaaacagcaattccactaaccag
aagactggaggttggcagggctacggacggaaaggatttggagctggcgggggagggatg
aaggcaatgcgaccgaagcagccacctaagcctcagcaactgcactattgcgatgtctgt
aagatcagctgcgctggaccgcaaacctatcgtgagcatctggagggccagaagcataag
aagaaggaggcttctctgaaggtgccgcaacagccgccagcccgtggagcaggcaacagt
cttcgctgtgaactttgtgatgtaacttgtacgggaaatgatgcctacgcagctcacatc
agaggtgctaaacatcagaaagttgttaaattgcatactaaacttggtaaacctatacca
agtgcggatccaactgttttgaatccaaagccagcagcagccgcaaaggctgcggctact
aagaaatcgaccgtgacagcaacacctaaaatcaacttcgttgcttctggaaacttaggc
acagtgaaccaaaatcaaactgctgaaattaaacaggaagaaccagttgccgaagaaact
gtagaagaggctgcggtcgatgagagagatattcaaccagtcggccaggaatatattgaa
gaaaataaatccgaagatggaaaaattataagttttaattgtaaactatgcgagtgtcgt
ttcaacgatcccaatgccaaagatatgcatatgaaaggccgccgtcacagatttgcttat
aaaaagaaagtcaaccctgatttagttgttgacatgaaaccgagccttaaacagcgtaag
atgttagaggaaaaactacgtaggcaacaaatgcgcgacgagtatctgcgtcgccgagaa
gaaatcaatcaattaggtcctatgggaccgatgatggatgaggaaatgatgtactgggaa
gaaagacgtcgttatgaagaggaatgtgaatactacgaatggtatcgacgatatggacgt
ggaccaggcgcaccaccgattccgcgtccgttccaaggcccaccacctataatgatgttc
ccaggacctcaaagacgaccagattcgtcggacgataaacatgtattggcgcatcatacg
actatttatcctaaggaacaagaacttctggcagttcaaaaaatagtttctcatacggag
aaagcattgaagtttgtgtcggatgcattggcagaagctagcaaaaaaaatactcctgcc
aatgctaacgctgttacagcagcaaccgtacccgctggtactccacaagtaaacaccgat
atagtgaaaaaagaagaggtcgacaagaaaaaagcaattacgccacaaaaagaagatgga
agcgacgggaatctattttcatttcaaaaagaaaaagaagactccagaatacttcgtggt
gttatgcgcgtaggaaacttggccaaaggattgctgttatctggggacaatcacgtttgt
cttgttgtcttgtgcgcagagaaacctactaggacattgctcaataaagttgcggagatt
ttaccgggtgaattaaagaatgtagctcctgaggaaacttacaatgtcggaaagcatcca
gaatctgcggctttaactgtctccggaggtacagtcaccgtcagcgtgacgctcaccagt
ccgttgatgcgtgagacacccaagtcagctgtgactgcagataatgctggacagcagcag
caggaagctgctcaactgcaaacaacgcccgcggccccaaccgtgacgaaaccagaccca
ccagatgtacttcccaaggctaagtgtttggaggctttagctgcactcaggcatgccaag
tggtttcaggctagagctacctcgttgcagagctgtgttatggttatccgtataatgcgc
gacctgtgcaatcgtgtgccaacatggggtccgttaaatccttgggcattggaattattg
actgagaaagtgatcagcaccgcaggaggtcctcttagtcccggagaagctttaagaaga
cttttggaatgtgtagccggaggaatattgctacctggtagtccaggcttatccgatcct
tgcgaaaaggagccagtggatgcgataggaaacatgacatctcaacaaagagaagacatt
actgcatccgcacagcacgctttacgattagtggcgttccgccagattcacaaagttcta
ggtatggagcaactgccgccgccgaaatttaaaggacgatttgctcgaaaacgaagacgc
gataacagcaacggcgagggcacggatagtgaggcttcgaaaaaagacaaaaaagcggaa
gagatcaaaatggagaccgactccaagtag
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