Cardiocondyla obscurior: 139104198
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Entry
139104198 CDS
T10704
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like isoform X1
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139104198
04121 Ubiquitin system [BR:
cobs04121
]
139104198
Enzymes [BR:
cobs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139104198
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139104198
Ubiquitin system [BR:
cobs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139104198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DUF5128
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
139104198
NCBI-ProteinID:
XP_070515616
LinkDB
All DBs
Position
LG01:complement(10812741..10821777)
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AA seq
983 aa
AA seq
DB search
MQKFYPPDTRSQLYHVNVQSLKTVILESCTSIDIRENMLATHQYDSFAEGRTYERKTRFF
NRATQQTSLDLYQKFLPSTMNQLKAPRNKIDYNRHFVQLTNKPRKQEDQRFTPRKFTIAK
KVRSLSDASPDRFSKHYPLEKMSQHPSKDNALGRLIYNNNSTDFLNEYPKLCSQNSTIAS
SLSCLSESRSSSSDDNLTSHSPVHQLDNESPDHFEYFRMFEDASITEMPGPSFSGVNYQS
KDCHTGYHMFEDLNMNLLKIDLRDDILSKQQSPAREEHGMEVHGSNAQGDVQHESLITLM
TKELEKDDSDVAMLSREQQAHSPISQRDLSDLPIIPTFSEELARLGEIKKENYSGSQSPV
REQWIRGLNIEEDASSATSTKEETKEAEEEPSFESRAIASYQCNEHPCTQLYYCQTCCKT
ICKECAINCIYKHVTVDFTEFLDNAQRQAEEVLIEAYLGIDVLADDMENMGLDIAALDQR
TREALTDVKYFSRRMWSAVEEREKKLFKQIAETYRWKYEVLREKYMNLKEDKVRLSQAVS
TLKCAIQDAQSSVCNPDDLLQRKDMVLAEIWQIRHNRKTKIRSVRDDNWISFKSVDSNVL
SVIANGGNVVVNGPGTIGDRLSNRDYKSSQSSPYFPYGLNEQMMQPIPRGRPITDYDRNI
HLPNRKHELQVKSTDVVILGYFGEDNPDNLCRPWGLICDNEGNIIISDRSNNRIQIYRED
GTLLRKFGSYGNGPCQFNRPAGIAVDARRRLIVVDKDNHRVQILTMEGEFLRSFGEHGEK
QGQFCYPWDVAVNSACEIAVTDTRNHRVQLFSPEGIPLRMFGGQPHLLRYLDSPRGICFN
NEGKLIVTDFNNHHVLIIEYNMVEMRILKCEKESKGKKQDGETADGQSEESTPTFQRPQG
VIAADDGSILVADSRHNSIKAFNSVGSLIYSYKPGQDEMDRPLGIALHWDGRMAFTDYGR
NYVRLVKLEHHMDPVPRNAIMFG
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaattctacccgccggatacgaggagccagctgtaccacgtcaatgttcagtcg
ctgaagacggtgattctggagagctgtacgagcatagatatccgagaaaacatgctcgcg
acgcatcagtacgactccttcgcggaaggtcgcacgtacgagagaaaaacaagattcttt
aatcgtgcaacgcagcaaacctctttggatctttatcagaagtttttgcccagcacgatg
aatcaattaaaagctccccgtaacaaaatagattataatcgtcattttgtgcaacttacg
aacaagcctcgaaagcaagaggatcaacgtttcacaccgagaaagtttactatcgccaaa
aaggtccggtcactttcggacgccagcccggatcgcttctcaaagcattatccgctggaa
aaaatgtcgcaacatccttcgaaagacaatgcattaggtcgcctaatctacaacaacaat
tccacagattttttgaacgaataccctaaattgtgcagtcaaaactctacgatcgcaagc
tcgctgagctgcttaagcgagagcaggtcgagctcctcggatgacaatctcacaagccac
tcgccggttcaccagctggataacgagtcgccggatcactttgagtacttccgaatgttt
gaggacgcaagtataaccgagatgcccggtcccagcttctcaggcgtcaattatcagagc
aaggactgtcatacgggctaccacatgttcgaggatctcaatatgaatcttctgaagatt
gatttgcgagacgatattttgtccaagcaacagtcacctgcgcgcgaggaacatggcatg
gaagtacatggatcgaatgctcagggggacgtgcaacacgaatcgttaataacgctgatg
acgaaagagctagagaaagacgacagcgacgtggcaatgttgtcaagagagcagcaagct
cacagcccgattagccagagggacctgtctgacttgccaattataccaacattttcggag
gagttagcgaggctaggcgaaataaaaaaagaaaattactcggggtcgcagtcacccgtg
agagaacaatggatccgcggtttaaacatagaagaggacgcgtccagcgcgacttcgacc
aaggaagagacgaaagaagcggaagaagagccgtcgttcgaatcaagagccatagcatct
tatcaatgtaacgagcatccgtgcacccaactgtattactgtcaaacttgttgcaagaca
atctgcaaggaatgcgctatcaattgtatctataagcatgtaactgtggacttcaccgag
tttctcgataacgctcagcgtcaggctgaagaggtgctgatcgaagcctatctcgggatc
gacgttcttgcggacgatatggaaaatatggggttggatatagcagcgctagatcagaga
accagggaagcgcttaccgacgtaaagtacttttcacgcaggatgtggtccgccgtggaa
gaaagggaaaagaaactgtttaaacaaatcgcggaaacgtaccgatggaagtacgaggtc
cttcgcgaaaaatatatgaacttgaaggaagacaaggtacggctgtcacaagccgttagc
acactcaaatgtgccattcaagacgcgcaatcatccgtgtgcaatcccgacgacctcttg
cagagaaaagacatggtgttagccgagatttggcaaattcgtcacaatcgtaagactaag
attcggtccgttcgcgacgataattggatctcctttaagagtgtcgacagtaacgtgctg
tctgtgatcgctaatggcggaaacgtcgtggtgaacggtccgggcacgattggggatcgt
ctgtcgaatcgagattacaaatcgtcgcaatcttcgccatactttccatacggacttaat
gaacagatgatgcagccgatcccgcgcggtcgtccgataacggactacgatcgcaacatc
caccttcctaaccggaaacacgagctgcaagttaagagcacggatgttgtgatcctcggc
tactttggtgaagacaatcccgacaatctctgccgtccgtggggattgatttgtgacaac
gagggcaacattataatcagcgatcggtccaataatcgcatacaaatctatcgcgaggac
ggcacactgctccggaagtttgggagttacggcaacggtccttgtcagtttaatcgtccg
gccggaatcgccgtcgatgctagacgtcgcctaatcgtggtcgacaaggacaatcatcgt
gtccagattctgacgatggagggcgagttcttgagatcttttggcgaacacggcgagaaa
cagggccaattctgttatccatgggatgtggcggtgaactcggcctgcgagatcgccgtt
acagatacgaggaaccatcgggttcagctgttcagtcccgagggtattcccttgcggatg
ttcggtggccagccgcatttattgagatatctggattcaccgcgtggtatctgttttaac
aacgaaggcaagctgatcgtcacggatttcaacaaccatcatgtgttaataatcgagtat
aacatggtggagatgcgcatactcaagtgcgaaaaggagtcgaaaggtaaaaaacaagac
ggcgaaaccgccgacgggcagagcgaggagagcacccccacgtttcagaggccccagggc
gttatagcagccgacgatggcagcatccttgtcgcagactcccgtcataattcaatcaag
gcgttcaattcagttggctcgctaatctactcgtacaaaccgggccaggacgagatggac
cgtcccttgggtatagcccttcattgggacggcagaatggcgttcacagattacggccgc
aactacgtgcgtctggtaaagctagagcatcacatggacccagtaccaaggaacgccatc
atgttcggttga
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integrated database retrieval system
