Cardiocondyla obscurior: 139104313
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Entry
139104313 CDS
T10704
Symbol
Rabex-5
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139104313 (Rabex-5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139104313 (Rabex-5)
Membrane trafficking [BR:
cobs04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
139104313 (Rabex-5)
Protein recycling
Other Rab GTPase associated proteins
139104313 (Rabex-5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Hen1_N
Motif
Other DBs
NCBI-GeneID:
139104313
NCBI-ProteinID:
XP_070515832
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Position
LG07:complement(5806111..5808997)
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AA seq
618 aa
AA seq
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MYSTKTPTLRIDEADLKCKNGCGFYGNAEWEGYCSKCHREHLQKRRAQAERVTHTQTSDT
DNVSRSTGHHKSYEEKKVQQEKKYKHLLNLTFRKPVTKVQAYQELYHELLKDNPDLEKVK
AENRDLLLYIAKTPVEKDVRKCIHSFVVDILQNKDVKRIEELSEMTQNFYHVFGKRLENS
TKYADISSDIKDKLLDYVERYAMTLLYRILFCPPFTTDEEKDLAIQKRIRQLNWVSGKNL
ECRIHETSSEVRELVYTSITDLLNMDSAKAPQEKLACVIHCCRNIFLLLQQSVDGPASAD
EFLPALIFIVLKANPARLKSNINFITRFCNASRLMTGEGGYYFTNLCCAVSFIENLTAES
LNMAEKDFNAYMSGECVPANTWESALMICESLHFMCEDITLLDDLQAKNTDIIKQTEELK
NKMMDFKEKIREDVNKVIERTPLLISHSQRVPTNLDSEDIESYQLPPPIIPQIYPHSVDN
MNGGVLTDLSNDLMRTSLVEDSVTPSPTFDFPSFIGDDSLEVSKGEDETSLISLDTQSDL
ASGETQLFKKHVTDSLLDECPTPDTNLPPVLKPINSEDYHGFTIQGSNIPTIPCSTGDSS
LTPADLDSDNYSGYYQNM
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtactcgacgaaaacaccaactctgcggatagacgaagccgatttgaaatgtaaaaat
ggctgtggattttatggcaacgcagagtgggaaggttactgtagtaaatgtcaccgggaa
catttgcagaaacgacgggctcaagctgagcgtgttactcacacgcagacttcagataca
gataatgttagtcgatcaactggccatcacaagagttacgaggagaagaaagtacagcag
gaaaagaaatataaacatttgctaaaccttacatttaggaaacccgttacgaaagttcag
gcatatcaagaattataccatgagttgctgaaggataatccagatcttgagaaagttaag
gcggaaaatcgagacttattgttgtacatagctaagacaccagtcgaaaaagatgtaaga
aaatgtatacattcatttgtagtagatatacttcaaaacaaagatgtgaaaagaatagaa
gaattgtcagaaatgacgcaaaatttttatcatgtgtttggaaaacgtctggaaaacagt
actaaatatgcagatatatcttcagatattaaagataagctattagattatgttgaaagg
tatgcaatgactttgctatatagaattcttttctgccctccattcacaactgatgaagaa
aaagacttggctatacagaaaagaataagacaattaaactgggttagtggtaaaaatttg
gaatgtagaattcacgagacaagctcagaagttagagaacttgtctatacatctattaca
gatcttttaaatatggattccgctaaagcgccgcaagaaaaactggcgtgtgtaattcat
tgctgtagaaatatatttttattgttgcaacaatctgtcgacggaccagcgtcggcagat
gaatttcttccagcgcttatatttatcgttttaaaggctaatcccgcgcgtcttaaaagc
aatataaattttattacaagattttgcaatgcaagcagattaatgactggagaaggggga
tactattttacgaatttgtgttgcgcggtatcgtttattgaaaacttaaccgcagaatct
ttgaatatggctgaaaaagattttaatgcatatatgtcaggagaatgtgtgccagctaat
acgtgggaatcggctcttatgatatgcgagagcttacactttatgtgtgaagatataact
ttattagatgatttgcaagctaaaaatactgatattataaagcaaacggaagagttaaaa
aataaaatgatggattttaaagaaaagattagagaagacgtaaataaagtgattgagagg
acaccattacttatatctcatagtcaaagagtgcctactaatttagatagcgaggatatt
gaaagctatcagctaccaccgccgattattccacagatttatccacattctgttgataat
atgaatggcggcgtactgacagacctatcaaatgatttaatgagaacttcattagtcgaa
gattctgtaacaccatcgccaacattcgattttccatcctttatcggtgacgatagtctg
gaagttagtaaaggcgaagacgaaactagtcttattagcttagatactcagtctgatctt
gcttctggtgagacacaactctttaaaaaacacgtgacagatagcttgttagacgaatgt
cccacacctgatacgaatttaccacccgttttgaaaccgattaattccgaagattatcac
ggtttcacaattcaaggatccaatataccgacaatcccgtgcagtacaggtgattcatcc
ttaactccagccgatttagattcagataattattctggttattatcaaaacatgtag
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