Cardiocondyla obscurior: 139104402
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Entry
139104402 CDS
T10704
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-B
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03013
Nucleocytoplasmic transport
cobs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139104402
03015 mRNA surveillance pathway
139104402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139104402
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139104402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
139104402
NCBI-ProteinID:
XP_070515963
LinkDB
All DBs
Position
LG07:5627383..5629409
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AA seq
323 aa
AA seq
DB search
MARSRKDSTGKSDSEATDKENKKERGRERERKKRAASSSSSGTSSSDSSSGSSSSSSGSS
SRSSSSSSSSSSSSASSSASSRDRGRKRSRSKSVDATRRHENKEKERDKERERERDRDKE
RDREKDRKKGNNAVPDKTKQKGRSRSPSPRRKRRERSPIPRPTKIHIGHLTRNVTKDHIV
EIFSSYGQIKMVDFAVDKLHPNQGRGFAYVEFETADEAENAMKHMDGGQIDGQEITAAPV
LLPKPRPLPMRRMSPGMGRRAPPRWGGGGRNTPPRYRRRSPIMNRRRSPRPPRRRIRSRS
RSPPGNPRHRHRRYTRSSSSSSR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaagccggaaagatagtacgggtaaaagtgattctgaagcgacggataaggag
aacaagaaggagagaggtagagaaagagaacggaagaaacgagcagcttcttcttccagc
agtggcaccagctcatcggacagcagctctggatcctcaagttctagcagtggcagtagt
tctagatctagctcttcttccagtagttcgtccagtagttcggctagttcttcagccagt
tccagagatcgcggaaggaaaagaagtcgtagcaaaagcgttgacgctacaagaaggcat
gaaaataaagagaaagagagggacaaagaaagagagagagaaagagatagagataaggaa
agagatagggaaaaagacagaaaaaagggaaacaatgctgttcctgataaaactaaacaa
aaaggcagatccagatctccttctccacgtagaaagcgtagagagcgttcgccgattcct
agaccaacaaaaatacacattggtcatttaacacgaaatgtcactaaagatcatatcgta
gaaatattttcatcatatggtcaaataaagatggttgactttgcagtggataaacttcat
cctaaccagggtagaggatttgcctatgtcgaattcgaaaccgctgatgaagctgaaaac
gctatgaaacatatggatggagggcagatagatggtcaagaaatcactgctgccccagta
ttattgccaaaacctcgaccgttgccaatgcgacgtatgtcgccaggtatgggaagacgt
gcaccacctcgatggggaggtggtggtagaaacactccaccacgttatcgcagacgttcg
ccgatcatgaatcgccgcaggagtccaagaccaccacgtcgcaggataagatctcgatca
cgaagtccaccgggaaaccctcgacatcggcaccgtcgttacacacgatccagctcaagt
agttctcgataa
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