Cardiocondyla obscurior: 139104580
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Entry
139104580 CDS
T10704
Symbol
Tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
cobs Cardiocondyla obscurior
Brite
Enzymes [BR:
cobs01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
139104580 (Tsen34)
Transfer RNA biogenesis [BR:
cobs03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
139104580 (Tsen34)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
EFL1
Motif
Other DBs
NCBI-GeneID:
139104580
NCBI-ProteinID:
XP_070516249
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All DBs
Position
LG08:3834572..3836747
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AA seq
306 aa
AA seq
DB search
MSMPDVIHLISSKNNVFIWNADDWLKLRRDHRIVGELVGSFSKSTRQEVFLGLPLLLLPE
EITLLLEKGIACLVECTSLNIRPDESLSQKFQEYRNKLFLEQADCLKDNRKRQITSMMDR
IVEGKKRKMLGLHTNKKNMKKPLDRKTQEALDKIEIDTKNLLKEELAKLPELSKNEALVQ
IHTAYPWSGENDVKAVEWKYPVTSDQQLKYKVYKDLWEKQYYITSGEKFGGDFLVYPGDP
IMFHSQYIVHCKRKDEEISIMEIITQCRLSCHVRKTLVFATYYEEKDVVKYQSSQWTEGS
VLKDST
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgccagatgttattcatctcatttcttccaaaaataatgtttttatatggaat
gctgatgattggcttaaacttcgacgagatcatagaatagttggagaattagtaggttcc
ttctcaaaatcaactagacaagaggtgtttttaggtctccctttgctgttgctgccagaa
gagatcactttattacttgaaaaaggaattgcttgccttgtagaatgtacaagtttaaat
atacgaccagatgaatcattaagtcaaaaatttcaagaatatagaaacaaattatttttg
gaacaagcagactgtttgaaagacaatagaaaaagacagattacttctatgatggacaga
attgtagaaggaaagaaacgcaagatgttaggtttacatactaataaaaagaatatgaaa
aagccattagataggaagacacaggaagctttggataaaattgaaattgatactaaaaat
ttgcttaaagaagaactggctaaattgccagaattgagtaagaatgaggcacttgttcaa
atacatacagcatatccatggtctggagaaaatgatgtaaaagcagtggaatggaaatat
ccagtaacatctgatcagcaacttaaatacaaggtgtataaagatctatgggaaaaacaa
tattatatcactagtggggaaaaatttggcggagactttctagtgtatcccggtgatcca
ataatgtttcactcacaatacatagtacattgtaaacgcaaagacgaagagatatctatc
atggaaattataactcaatgcagactcagttgtcatgttagaaagacattggtatttgct
acatattacgaagagaaagatgtagtaaaatatcaatcttcccaatggacagaaggcagt
gtattaaaagatagcacataa
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