Cardiocondyla obscurior: 139104697
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Entry
139104697 CDS
T10704
Name
(RefSeq) PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cobs03400
]
139104697
DNA repair and recombination proteins [BR:
cobs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
139104697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
Rhabdo_glycop_FD
Motif
Other DBs
NCBI-GeneID:
139104697
NCBI-ProteinID:
XP_070516444
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All DBs
Position
LG08:1380342..1384290
Genome browser
AA seq
742 aa
AA seq
DB search
MPISELDVKTITLITTTQVITSVYAVVKELMENAIDAGADNIEINLIDNGTSLIEVKDNG
CGISKEDAPYMALSSHTSKITHFDDLDALQTFGFRGEALNALCAVAEVNIITKTEEDNVG
VLYTMNHNGQIVTDKPCSRSTGTTIQVKDLFKQIPVRRQIITNARKANQTIKLLEILMQC
FGICKPNVRIQFRVNNNVTFTKPSLNNIKEAVNHILGRKIVSNMEWIESKSAEFTLQVML
PSKRAQDLSERSHPDLHYIFVNNRPIKHKDLEKLVNSLILEYFEQESRRRKMMFLVYLTL
SPMDIDINLEPNKDAIFFKDQNKVFNAVEKCIRHFYGLKSVESSEQNVSNDTSACYEDYT
FSLNENTPDTEQPVCKKRKIHTEERINQEDIIKEKTQLSNGNKCENFSKNNQQNDNQRCG
NTLALTTHINPPNLSDSDSNDTFPAADKTNVNFEEDISTISQLPVVDLGEDFDIEEITHC
NISMDKIEQKVDIQEKRQITLEAWSKGHVSGLEGGTNIKSDIAIEGKLEDNLNNTTVESD
EIHIDHRDLNFLKHVRLQVAKEHPDTLTAAQKAKNITDFWKQLSSEERGYYRDIAGQEAK
NTEWRQKKVERKVDANKMESEKNKNRLLQLFEKMKNKKNEKKEKLNMRTIVPWIIDRTKI
ITRSDFDSEHVIGRLTSNLWVATICERIWIVDILGLIKGLKVTDIDPDKIDAKKIERLLK
QWLIERDDMSVMHSIHEFTKIV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgccgatttcggaactggatgttaaaacgatcacgttaattaccaccacgcaagtaatt
acgtctgtatatgccgtagtgaaagaattaatggaaaatgctatcgacgctggtgcggat
aacatcgaaattaaccttattgacaatggtacatccttaatagaagtaaaagacaatggt
tgtggtatatctaaggaagatgcaccgtatatggcattaagttcccatacatctaaaata
acacattttgatgatttagatgctttacaaacttttggatttagaggtgaggcacttaat
gcattgtgtgcagtagcagaagttaatattataacaaaaacagaagaggataatgttgga
gttttatatacaatgaatcataatggacaaattgtgactgacaaaccttgctcgagaagc
actggaactaccatacaagtaaaggatttatttaaacaaatacctgttagaagacaaata
ataaccaacgcaagaaaagctaatcaaactatcaaattattggagatattaatgcaatgt
tttgggatatgtaaaccaaatgtacgaattcaatttagagtaaataataatgttacattt
acaaaaccaagtttaaataatattaaagaagcagtaaatcatatattgggcagaaaaatt
gtgtctaacatggaatggatcgagtctaaaagtgcagaatttactttgcaagtaatgctg
ccttcaaaaagagcacaggatttatcagaaaggtctcatcctgacttacactatattttt
gtaaataataggccaattaaacataaggatttagaaaagctagtaaatagtttgatatta
gaatattttgaacaagaatctcgtcgaagaaaaatgatgtttcttgtgtaccttactttg
agcccaatggacattgacattaatttagaaccaaataaagatgcgatcttttttaaagac
cagaataaagtctttaatgctgtagaaaaatgtataagacacttttatggacttaaatcc
gtggaaagcagtgaacaaaatgtttctaacgatacgtctgcctgttatgaagattataca
tttagtttgaatgaaaatacgcctgatactgaacagcctgtatgtaaaaaacgaaaaatt
catactgaagagagaattaatcaagaagatattattaaagagaaaacacaacttagtaat
ggcaataagtgtgaaaatttttctaaaaataatcaacagaatgataatcagcgttgcgga
aatacgttagctctaacaactcacataaatccaccaaatttgagtgattctgattcaaac
gataccttccctgctgcagataaaacgaatgtgaatttcgaagaagatatttcaactata
agtcaactacctgtagtagacctaggcgaggattttgatatagaagaaattacacattgt
aatatttccatggataaaatcgagcagaaagtagatatccaagaaaagaggcaaattaca
ttggaagcatggagtaaaggacatgtctctggactcgagggtggtacaaatataaaatca
gatattgctattgaaggaaaattagaagataatttaaataatacaactgttgaatcagat
gaaatacacattgatcatcgagatcttaattttctaaaacatgttcgattacaagttgca
aaggaacatcccgatacattaacagcagctcaaaaggcgaaaaatattactgatttctgg
aagcaactatcatccgaagagcgtggttattatcgcgatattgccggtcaagaagcaaaa
aacacagaatggaggcaaaaaaaagtcgagaggaaagttgatgctaataaaatggaatcg
gaaaaaaataagaaccggctattacaactatttgaaaaaatgaaaaataaaaagaacgag
aaaaaagaaaaattaaatatgcggacaatagtaccctggattattgacagaactaagata
attacaagatcagattttgatagtgagcacgtaataggtcgattaacatccaatttgtgg
gttgctacgatatgcgaacgaatatggattgtagatattcttggtctgattaagggcttg
aaagttaccgatatagatccagacaagattgatgcgaagaagatcgaacgccttcttaaa
caatggctaatagaacgtgatgatatgtcagtaatgcattctatacacgaatttacaaaa
atagtgtaa
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