Cardiocondyla obscurior: 139104943 Help Entry 139104943         CDS       T10704                                  Symbol Vps39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism cobs  Cardiocondyla obscurior Pathway cobs04140   Autophagy - animal cobs04142   Lysosome biogenesis cobs04148   Efferocytosis Brite KEGG Orthology (KO) [BR:cobs00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     139104943 (Vps39)    04140 Autophagy - animal     139104943 (Vps39)    04148 Efferocytosis     139104943 (Vps39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cobs04131]     139104943 (Vps39) Membrane trafficking [BR:cobs04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     139104943 (Vps39) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C VPS18_solenoid_2nd Clathrin TPR_Vps41 Beta-prop_RIG_2nd AP_endonuc_2 Zn-C2H2_12 B129_C2H2-zf Motif Other DBs NCBI-GeneID:  139104943 NCBI-ProteinID:  XP_070516840 LinkDB All DBs Position LG08:1541171..1546073 Genome browser AA seq 880 aa AA seqDB search MHDAYEDTSILNITVQIESMAAYDDNLLIGTREGHLIMYNVPTMFDDTHKLELLRHSKNF NKKRINQIDVVPEYNLLIILTDNIVCIHDLNSPNFQQICQLSKTRGATLFTLDVQSTESL TGKKNTVVRLCVAVKRKLQLYYWKGKKFEEFKDFEITVPDIPRQLSWCGEKLILGFRGLS YMIYDLNDKPKELFPTGKSPEPSITKLSDSFFVLGKDSQSVVMDTRGELVQHNTVKWSDT PNAIAWDDPYLLGIVHDRLEIYTLEGCLNIQTIKDLNKARLIYRCKQGKVFVASISQIWC IKAIDVALQIRTLLEQNQFQLALKLTSLSDITDEEKAKQTYKIQTLYAHHLFYNKRFQEA MNLFLKLGTDPYEVIRLFPDLTNTSSNTSEVDEPAPNLPKLQDTDLEKGLRALIVFLTEV RHNLMAKDKDLNKEKNGVNEEKNLTAVKATEQLLKIIDTTLLKCYLQTTDALVAPLLRLN HCHLAEAEKTLLMHQKYPELIILYQTKGQHKKALELLEKHAKENDSSLKGIERTIQYLQH LGKDHMDLILKFAGWVLTEDPEQGLRIFMEDIQEVENLPRPKILDYLLRFHKDLVIQYLE HVVHVWEDNNPLFHNVLIHQYKEKCLASMSTNATPAEKEISQHVRQKLQEFLEKSTHYTP ETILVHFPFDSLFEERAIILGRLGRHQQAISIYVSLLNDIPRAIQYCENVYTKYQSEDRA EKQKQTDNADEVYVLLIQQLLKPDNEGVLIAGCSLEVQRTAQPDLEMALQLLKEHASKIN PMKVLEVLPDSVPIGRIKHFLEVSLQNNLNAKRKTQVLKGLLYAEHLQVQEQRMHYESQS VLMTEFNICPVCKKRFGNQSAFARYPNGDIVHYSCQDRKS NT seq 2643 nt NT seq  +upstreamnt  +downstreamnt atgcacgacgcttacgaggacacgtctatattgaatatcactgtgcaaattgagtctatg gccgcttacgatgacaaccttctaatcggcaccagagagggccaccttattatgtacaat gtcccaacaatgttcgatgacacgcataaactggaattgctacgtcacagcaagaacttc aacaagaagcgaattaatcagatagacgttgtaccagaatataatttgttaattattctt acagacaacatcgtgtgtattcacgatttgaattcaccaaattttcaacaaatatgtcag ctgtcaaagactcgaggtgctacgttatttactttggacgtccagtcaaccgagagcctg acaggaaagaagaacaccgtggtacgattgtgtgtcgctgttaagcgcaaattacaactg tattattggaagggaaaaaagtttgaagagtttaaagattttgagattactgtgccggat atacctcggcagttgtcatggtgtggcgaaaagttgatattaggatttcgtggcttatcc tatatgatttacgacctaaacgataaaccaaaagagctttttcctaccggtaaatctccc gaacccagcattacaaagctatcggacagtttttttgtcctgggtaaagattctcaatcg gttgtcatggacacaagaggagagctggttcagcataatactgtaaaatggtctgataca cctaatgcaatagcatgggatgatccttacttgctcggcattgtgcacgatagattggag atatatacattagaagggtgtttaaacatacaaacgataaaagatctgaacaaggcgaga ctcatatatcgatgcaagcaaggaaaagtttttgtggcatctatcagtcagatttggtgt atcaaagcgatcgacgtcgctttacaaatcaggactttgctggaacaaaatcaatttcag ctggcattaaagttaactagtttatcagatataacagacgaggaaaaagccaagcaaacg tacaagatacaaaccctgtacgcgcaccatttgttctacaataagcgatttcaagaggca atgaatctgttcttaaaactggggaccgatccgtatgaagtgattagattatttccagat ttaactaatacttcgagcaatactagcgaagtagatgaaccagcgcccaatttaccgaaa ttacaagataccgatttggaaaagggcttgcgtgcactgatagtctttctaactgaagtt cgacacaatttgatggcaaaagacaaggacctcaataaagaaaaaaatggagtaaacgaa gaaaagaacttaaccgccgtaaaagccacagagcagcttttgaaaattatagatactact cttctaaagtgttatttgcagaccactgacgctctggttgcgcctttacttcgactaaac cattgtcacttggcagaggctgaaaagaccttgttgatgcatcaaaaatatccggaactt attatattgtatcaaaccaaagggcagcacaaaaaagcgctggagttgctggaaaagcat gcaaaagagaacgattctagtttaaagggcatcgagagaactatacagtatttgcagcat ctggggaaagatcacatggatctaatattaaagtttgccgggtgggttttaacggaggat cccgagcaaggccttagaatattcatggaggacatacaggaagtcgagaacctacctagg ccaaaaatactggactatcttctacgttttcacaaagatttagtgatacaatatttagag cacgtggtgcacgtttgggaggacaataatccgttattccataacgttttgatacaccaa tacaaggagaagtgtctagcgtccatgagtacaaacgcaacgccggcggagaaggagatt tcacagcacgtccggcagaagttgcaagagtttttggagaagtctacgcattacacgccg gaaacgatattggtgcatttcccgtttgacagtttgtttgaagagcgcgcgattatactt ggacggcttggtcgccatcaacaagctatctcgatatatgttagtcttttaaacgatata ccgcgtgcaatacagtattgcgaaaatgtatatacgaagtatcagagtgaagatcgtgcg gaaaaacagaagcaaacggacaacgctgatgaagtatacgttttgttaattcagcagttg ttgaaacccgataatgaaggagttttaatagctggttgtagtctagaagttcaaagaacg gcacaaccggatttagagatggctttgcaattattaaaggagcatgcttcaaagataaat cccatgaaggttttggaagttttaccagattccgtacctatcggtagaataaagcacttc ctagaagttagcttgcagaacaatctgaacgcgaagcggaagacgcaagttctcaaagga ctactttacgcggagcacttgcaagtacaagagcaacggatgcactacgaatcgcagagc gtccttatgacggagtttaatatatgcccagtttgcaaaaaaagatttggcaaccaaagc gcttttgcgaggtatcccaatggtgacatagtgcattactcttgtcaagatcgtaaaagc taa

DBGET integrated database retrieval system