Cardiocondyla obscurior: 139104963
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Entry
139104963 CDS
T10704
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03018
RNA degradation
cobs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139104963
09123 Folding, sorting and degradation
03018 RNA degradation
139104963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139104963
03041 Spliceosome [BR:
cobs03041
]
139104963
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139104963
mRNA degradation factors
5'-3' decay
Lsm complex
139104963
Spliceosome [BR:
cobs03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
139104963
Complex C
U2 snRNP components
139104963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
139104963
NCBI-ProteinID:
XP_070516870
LinkDB
All DBs
Position
LG08:1538104..1538975
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AA seq
96 aa
AA seq
DB search
MLFYSFFKSLIGKDVVVELKNDLSICGTLYSVDQYLNIKLADISVTDSEKYPHMLSVKNC
FIRGSVVRYVQLPVDEVDIHLLTEAARREAMNAQAR
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgttgttctattccttttttaaatccttaattggaaaggacgtagtagtagaattgaag
aatgacctcagcatctgtggcactttgtattctgttgaccagtacttaaacataaaattg
gctgatatcagtgtgacagattcggagaaatatccccacatgttatcagtaaagaactgc
ttcattcgcggatctgtggtgagatacgtgcaacttccagtggatgaagtagacattcat
cttctgactgaagcagcaagaagggaagcaatgaacgcccaagcgagatag
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