KEGG   Cardiocondyla obscurior: 139105014
Entry
139105014         CDS       T10704                                 
Symbol
Trf2
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
cobs  Cardiocondyla obscurior
Pathway
cobs03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cobs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    139105014 (Trf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cobs03000]
    139105014 (Trf2)
   03021 Transcription machinery [BR:cobs03021]
    139105014 (Trf2)
Transcription factors [BR:cobs03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    139105014 (Trf2)
Transcription machinery [BR:cobs03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     139105014 (Trf2)
  RNA polymerase III system
    TFIIIB
     139105014 (Trf2)
  RNA polymerase I system
    SL1/TIF-1B
     139105014 (Trf2)
SSDB
Motif
Pfam: TBP T19C3_2_like SCP1201-like P22_Gp10_C PP_RS20740
Other DBs
NCBI-GeneID: 139105014
NCBI-ProteinID: XP_070516945
LinkDB
AA seq 304 aa
MATAIQENGMKPLTNKSLNHVKDVNNLSNADSRAEEKDRLFDGQLQPYADRTQEPHDKTH
EQVHEEPHEEPPELDIVINNVVCSFSVRCHLNLREIALNGSNVEYRRENGMITMKLRRPY
TTASIWSSGKVTCTGATSEVQAKIAARRFARSLQKLGFRVRFNNYRVVNVLGTCCMPFAI
KITSFSIHHKENADYEPELHPGVTYKLKDPKATLKIFSTGSVTVTAPNVASVQAAIEHIY
PLVYEFRKERTAEDELALTTKKRKLGLNKRKLDEFLEDEPDFYESMISDAEDALEEAGSD
GSWD
NT seq 915 nt   +upstreamnt  +downstreamnt
atggcaactgctattcaagagaatggcatgaaaccattaacaaataaatccctgaatcat
gtgaaggatgttaacaatttgagcaatgcagactcccgtgcagaggaaaaggacagattg
tttgatggtcagcttcaaccttatgcagatcgtactcaagagcctcatgacaagacccat
gaacaagttcatgaagaaccccatgaagagcctccagagctagatattgttattaacaat
gtagtttgcagttttagtgtcagatgtcatttgaacctgagagagatagcgctcaatgga
tccaatgttgagtacagaagagaaaatgggatgataacaatgaaattaagaagaccatat
actacagcgtctatttggtcatccggtaaagtaacttgcaccggtgctaccagtgaagtt
caagcaaaaattgcagcgcgcagattcgcacgttctcttcagaaacttggatttagagtg
agattcaataattatagggtggtcaatgtattaggcacttgttgtatgccatttgccatc
aagataacgtcattttcaatccatcacaaagaaaatgccgactatgagccagaactacat
cctggtgttacatacaaattgaaagatccaaaagctactctaaagatattttctacagga
agtgttaccgtaacagcacctaacgtcgcttcagttcaagcagcgattgaacatatttat
ccactagtctacgaattccgtaaggagcgaacggcagaagacgagcttgcgttaacgaca
aagaagcgcaagctgggtttgaacaaaagaaaactggatgagttcctagaagacgagcca
gacttttatgaaagtatgatctctgacgcagaagacgcacttgaagaagcagggagtgac
ggtagttgggactga

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