Cardiocondyla obscurior: 139105014
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Entry
139105014 CDS
T10704
Symbol
Trf2
Name
(RefSeq) TATA box-binding protein-like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139105014 (Trf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobs03000
]
139105014 (Trf2)
03021 Transcription machinery [BR:
cobs03021
]
139105014 (Trf2)
Transcription factors [BR:
cobs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
139105014 (Trf2)
Transcription machinery [BR:
cobs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139105014 (Trf2)
RNA polymerase III system
TFIIIB
139105014 (Trf2)
RNA polymerase I system
SL1/TIF-1B
139105014 (Trf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
T19C3_2_like
SCP1201-like
P22_Gp10_C
PP_RS20740
Motif
Other DBs
NCBI-GeneID:
139105014
NCBI-ProteinID:
XP_070516945
LinkDB
All DBs
AA seq
304 aa
AA seq
DB search
MATAIQENGMKPLTNKSLNHVKDVNNLSNADSRAEEKDRLFDGQLQPYADRTQEPHDKTH
EQVHEEPHEEPPELDIVINNVVCSFSVRCHLNLREIALNGSNVEYRRENGMITMKLRRPY
TTASIWSSGKVTCTGATSEVQAKIAARRFARSLQKLGFRVRFNNYRVVNVLGTCCMPFAI
KITSFSIHHKENADYEPELHPGVTYKLKDPKATLKIFSTGSVTVTAPNVASVQAAIEHIY
PLVYEFRKERTAEDELALTTKKRKLGLNKRKLDEFLEDEPDFYESMISDAEDALEEAGSD
GSWD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgctattcaagagaatggcatgaaaccattaacaaataaatccctgaatcat
gtgaaggatgttaacaatttgagcaatgcagactcccgtgcagaggaaaaggacagattg
tttgatggtcagcttcaaccttatgcagatcgtactcaagagcctcatgacaagacccat
gaacaagttcatgaagaaccccatgaagagcctccagagctagatattgttattaacaat
gtagtttgcagttttagtgtcagatgtcatttgaacctgagagagatagcgctcaatgga
tccaatgttgagtacagaagagaaaatgggatgataacaatgaaattaagaagaccatat
actacagcgtctatttggtcatccggtaaagtaacttgcaccggtgctaccagtgaagtt
caagcaaaaattgcagcgcgcagattcgcacgttctcttcagaaacttggatttagagtg
agattcaataattatagggtggtcaatgtattaggcacttgttgtatgccatttgccatc
aagataacgtcattttcaatccatcacaaagaaaatgccgactatgagccagaactacat
cctggtgttacatacaaattgaaagatccaaaagctactctaaagatattttctacagga
agtgttaccgtaacagcacctaacgtcgcttcagttcaagcagcgattgaacatatttat
ccactagtctacgaattccgtaaggagcgaacggcagaagacgagcttgcgttaacgaca
aagaagcgcaagctgggtttgaacaaaagaaaactggatgagttcctagaagacgagcca
gacttttatgaaagtatgatctctgacgcagaagacgcacttgaagaagcagggagtgac
ggtagttgggactga
DBGET
integrated database retrieval system