Cardiocondyla obscurior: 139105111
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Entry
139105111 CDS
T10704
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cobs03036
]
139105111
Enzymes [BR:
cobs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
139105111
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Gene silencing
piRNA pathway
139105111
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TUDOR
DUF4280
Tudor_krimper_1st
AAA_19
Motif
Other DBs
NCBI-GeneID:
139105111
NCBI-ProteinID:
XP_070517119
LinkDB
All DBs
Position
LG08:2420397..2426181
Genome browser
AA seq
1002 aa
AA seq
DB search
MSQKMNKFRHRPGAIPATAKEIRIKSIQNPYTMRAYEIENYIQALKTIEEKLVKFMKMGE
NLNKEKDKEKSATVGDMVFIHLISYNDEIKLPSFVYRGLINHINKDGAYYIFLVDHGISI
ELTRNKFYILPQDFISDKYLTKTVGIFGILPICMKNNDSMPNSSNSTAVVVEKWTKEAIQ
FIKHLLSFIEVIYFDHLVTDENNGKEYGEFYFSIDENVVSLSEALFNNYHALYLEGDLLK
LAEMDPQLRKRRWHVLHVKFSKDREERKIPTFINRINDYQTKFFLSEKILIQSSVDCDVL
SDITDLRYPKEVHEGWMQSIKSSRPRKLQSYICPAINNGLNVVAVGSSQCGKTTGCILAV
CGQITKLEKKMHSATRPLALILCTSTFEVIFIQSLCDLFLKAFKNIRSVAAFNGLSDRSV
AAMIYNGCQILVTTPRYLSRFMNENKDILLFDRLSFLVLDNADVILDKYHHSIGQLFKKH
NVIENREPQGDNRPILQIIISLTSWTEKTKRFVNFAMYNPYICIASFIEAVVFKSVCPKL
YCLESKHKNNKILDLLKNDNGTLRTAIICVNAKEAEELNNSLISTKKTLLIHEEMKSFDI
QALRNSWMSCIYGFYPILICTDPVLSELNITNIKWLIHHSVLLKLKNHFNYRFSVLLNNL
TQRVPDCKITIIIDENNNIQVQSIIKMLQRMKIEIHPEILYYVQKIAITLEMNKKDYVLC
DNVKSFGFCQNQSNCVFRHCILREIDMPMTNVQINDKVKLVVLYIHDTTHFSARIVEHIP
HSDKSDKITYSNVEYMQTAMKIQNYYGNIENRKMCISTNVGDICALEDILDTFKRVQVLR
VNYDSNNFQDVKYVDVRCIDSGIVRESVDVRKLMNMPEELQKLPTHVVEVFLADLVPQDE
EYMWNRYTNEQVHKWFANNFNGSCDYIGGKVCLHLGNTIWLDDLIIGTKLNGHSTVKVSS
LKKELLSGKYAVSDSNHLLNLFELCRNGGLTHFNVHDTSISE
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaagatgaacaaatttcgtcatcgtccaggcgctattcctgccactgccaaa
gaaataagaataaaaagtatacaaaatccttataccatgagagcttatgaaattgaaaat
tacatacaggcactgaaaacaattgaagaaaaattagtaaagtttatgaaaatgggtgag
aatttaaataaagaaaaagataaagagaaaagtgccacagttggtgatatggtttttatt
catcttattagttacaatgatgagataaaactaccatcatttgtttaccgtggtttaata
aatcatattaataaagatggagcatattatatttttttagtggatcatggtattagcatt
gaattaactagaaacaaattttatatacttccacaagattttatttctgataagtattta
acgaaaactgtcggcatttttggtattttaccgatttgtatgaaaaataatgactccatg
ccaaatagctccaactctacagcagttgttgtagaaaagtggaccaaagaagcgattcaa
tttataaaacatcttcttagctttattgaagttatatactttgatcacctagtcacagat
gaaaataatggaaaagaatatggagagttttattttagtattgatgaaaatgtcgtgtcg
ttaagcgaagctttgttcaataattatcatgctctctatttagaaggagatttattgaaa
cttgccgaaatggatccacaacttagaaaaagacgatggcatgttttacacgtaaaattc
tcaaaggatagagaagaaagaaaaattccgacatttattaacagaataaatgattatcag
acgaaattttttcttagtgagaagattttaatacaaagctcagtagactgcgatgtctta
agtgacattacagatcttagatatcctaaagaagtacatgagggctggatgcaaagtatc
aaatcttccagaccaagaaaacttcaatcatatatatgcccagcaataaataatggatta
aatgttgttgccgttggatcatcacaatgtggtaaaacgaccggctgcatactggctgtt
tgtggtcagataactaaacttgaaaagaaaatgcacagtgcgacacgtccattagcgtta
attttatgtacctcaacatttgaagtaatctttattcaatctttgtgcgatttatttcta
aaagcatttaaaaatataagatctgttgcagcattcaatggcttatcggatagatcagtt
gcggcaatgatatataatgggtgtcaaattttagtgacaacaccacgttatttgtctcga
tttatgaatgagaacaaagatatattattatttgacaggctttcttttttagtgcttgat
aacgctgatgtaatattagataaatatcaccactcgataggacaactctttaagaaacat
aatgtaattgaaaatcgtgaaccacaaggtgataatagaccgatattgcaaataattata
tctttaacaagttggacagaaaagactaagaggtttgtaaattttgcgatgtataatcca
tatatatgcattgcgtcatttatagaagctgttgtctttaagtctgtatgtccaaaactc
tattgtttggaatctaagcataaaaataataaaatattggatttattaaaaaatgataac
ggtacgttgagaacagcgataatatgtgtaaacgccaaagaggctgaagaattaaataat
tctttaatttcaacaaaaaaaactttattgattcacgaagaaatgaaatcattcgacata
caagctttacgaaacagttggatgtcgtgcatatatggcttctatccaatattgatatgt
actgatccagtattatctgaacttaatattactaatattaaatggctgatacatcattct
gtgttattaaaattaaaaaatcattttaattatagattttctgtacttttaaataattta
acgcagcgtgttcctgattgtaaaattactataattattgacgaaaataacaatatacaa
gttcaaagcatcataaaaatgttacaacgcatgaaaattgaaatacatccggaaatattg
tattacgttcagaaaatagcaattacgttggaaatgaataaaaaagactatgttctttgt
gataatgtgaaatcgtttggcttttgccaaaatcaaagtaattgtgtatttagacactgt
attcttcgtgaaattgatatgccaatgacaaatgtacaaataaatgataaagttaagttg
gtggtgttatatattcatgatacgacgcatttctcggcaagaattgtcgaacatattcca
cattctgataaatcggacaaaattacatactccaacgttgaatatatgcaaactgcgatg
aaaattcaaaattattatggaaatattgaaaataggaaaatgtgtatttcaacgaacgta
ggtgacatttgtgctttggaagacattctcgacacatttaaacgagtacaagttttacgc
gttaattatgatagcaataattttcaagatgtaaaatatgtagatgtgagatgtatcgac
agtggtattgtacgagaatccgttgatgtacgtaaattaatgaatatgccagaggaacta
caaaaacttccaacacacgttgtcgaagtatttttagcagatttagtaccacaagacgag
gaatatatgtggaatcgatataccaacgaacaagtgcataaatggtttgcaaataacttc
aatggaagctgcgattatattggtggaaaagtttgccttcatcttggcaatacaatatgg
ttagacgatttaataattggaacaaaattaaatggccattccactgtaaaagtttcttct
ttaaaaaaagaattactttctggaaaatatgcggtttcggatagtaatcatttattaaat
ctattcgaactttgcagaaatggtggattgacacattttaatgttcatgacacaagtatc
tcggaatga
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