Cardiocondyla obscurior: 139105142
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Entry
139105142 CDS
T10704
Symbol
Rel
Name
(RefSeq) nuclear factor NF-kappa-B p110 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04519
Cadherin signaling
cobs04620
Toll-like receptor signaling pathway
cobs04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
139105142 (Rel)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
139105142 (Rel)
04624 Toll and Imd signaling pathway
139105142 (Rel)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobs03000
]
139105142 (Rel)
Transcription factors [BR:
cobs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
139105142 (Rel)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
RHD_dimer
Ank_2
RHD_DNA_bind
Ank_4
Ank_3
Ank_5
Ank_KRIT1
RRM_9
Motif
Other DBs
NCBI-GeneID:
139105142
NCBI-ProteinID:
XP_070517178
LinkDB
All DBs
AA seq
895 aa
AA seq
DB search
MPDAYENVNMAVRSILTDVIADNEDFQFNDLTPLGSAGILSPFSSVGSQGNMSTMSPMST
SLSPIHATDDYINLTNEVIGESYISILVQPMDKFRFRYRSEMVGTHGSLLGVFNGRKRNK
SNVPAVKLHNFLDKAIIRCTLVTTDEGLRIPHAHRLVRRMNGVDKGDPHYIEVSPQNDFT
AEFHGMGIIHTARRNVKDEIVFKLREEILEERKRTNINATLNLRDDAQIKADVEVYQKSI
NLNSVALCFQGFIKDEHNIMRPITAPVYSNPINNLKSALTGELKICRIDKYTSSCEGGEE
VFILVEKVSKKNIRIKFFETDDDDIEIWADYGSFSELDVHHQYAMVFRTPPYRDRTITSP
KEVFIQLERPSDSACSEPIKFTYKPSDRMIGRKRTRISHSNSSELVQTIFNNDVFLTSTS
SNTPLNTESADISKELKQMLDDKCSSGEFRDFVERINSDDLMLYEKLIQQGSEDKLTYDS
APSKKDDKSFAKDVIIDITMNIKLKPNKAIDIIKKALKDRTTYGDSPLHCALRYGQKENV
KRIIRLMSLLNKDAEELVNIRNSSGKSPLHYAASQDQPEITKALLMLGADPNITDHYGQM
PLHRAVKFPEAERSIDILLAEKEINIEANTDLGWTPLQLAAKAGSYYAVCSLVQTGADVN
STDMTYGRTALHIAVEGSHQDIVEFLLKNTKIDVNKRNFSGNTALHTACVIPGTKAKEIC
ALLMQNGADPHLRNYNRESSVAEGEPMQGVKIETQSEDENLEECTGQSSFDLASNKPDIL
QLVSGQNEILESMIKEENIDDIHKVWMDVEQEKHLANILDETKGWKKLANFFNFEYLMNV
FEQSKTNSTLLLLNYIAIQTNTSLSELQRIFQDIGEEVAATYMSQILSVKQENKF
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgccagatgcgtacgagaacgttaacatggcagtgcgaagcatactgactgacgttatc
gcagataacgaagacttccaattcaatgatttaacaccactgggtagtgcaggtatctta
agcccatttagcagtgttggatctcaaggaaatatgagtaccatgtcacctatgtcaacg
tccttgtcacctatacatgctacagatgattatattaatttaacaaatgaagtgattggt
gagtcctacatcagtattttagtgcaacccatggataaattcagattccggtacagatct
gaaatggtagggacacatggaagtttgctaggtgtatttaacggacgtaaacgaaataaa
agtaatgtacctgcagtcaagttgcataattttttggataaagctataatacgttgcaca
ttagttaccactgatgaaggtctcaggataccacatgctcatagattagtgaggcgaatg
aatggtgtagataaaggagatccacattatatagaagtttcacctcaaaatgattttaca
gcagaatttcatggtatgggcataatacatacagcaagaagaaacgttaaagatgaaata
gtatttaaattgcgcgaagaaattctggaggaacgcaaacgcacaaatataaatgctact
cttaatttacgtgatgatgctcaaattaaagccgacgtggaggtgtatcagaagtctata
aacttgaatagcgttgctctttgttttcaaggatttattaaagacgaacataatattatg
agaccgattacagccccagtttatagcaatccaatcaacaatttgaaaagcgcattaact
ggagaacttaagatatgcagaattgacaagtatactagcagttgtgaaggtggcgaagaa
gtatttatacttgtagagaaagtttcaaaaaaaaacataaggataaaattctttgaaacc
gatgacgacgacattgaaatctgggccgattatggtagtttttcggaattggatgtccat
catcaatatgctatggtatttcgaactccaccatatagagatcgaactattacttctcca
aaagaagtctttatacaattagaacgtccttcggattctgcctgttcagaacctattaaa
tttacgtataagccgagtgatcgtatgataggtaggaaaaggacacgaatatctcattca
aatagctcagaattggtgcaaacaatttttaacaatgatgtttttttaacgagtacatca
tcaaatacgcctttaaacaccgaaagtgctgacatatctaaagaacttaaacaaatgtta
gatgataaatgttcttctggggaattccgtgatttcgttgaacgcataaattcagacgat
cttatgttatatgagaaattaatacagcaaggtagcgaagataaattaacttacgatagt
gcaccgagtaaaaaggatgataaatcgtttgcaaaagatgttataattgatataacaatg
aatataaaattgaagccaaacaaagcaatagatattattaaaaaagcgcttaaagataga
acaacttacggagactcgccattacattgtgcacttcgatatggacaaaaggaaaatgta
aagcgaatcataaggcttatgagtcttttaaataaagatgctgaagaattagtgaatatt
cgaaatagttctggaaagagtccgttgcattatgctgcttcgcaagatcaaccagaaatt
acaaaagcattactcatgcttggcgcggatccaaatataactgatcattacggacaaatg
ccattgcatagagctgtaaagtttccagaagcggaaagaagcattgatattttattagct
gaaaaagagatcaacattgaagcaaatacggatttaggatggacacctttgcaattagct
gccaaagcggggtcatattatgcagtgtgctctcttgtgcagactggcgcagacgtaaat
agtactgacatgacttatggaagaactgctttacatatagctgttgaaggaagccaccaa
gatattgttgaatttctgttaaaaaatactaagatagacgtgaacaaaagaaactttagt
ggaaacacagcgctgcacactgcgtgcgttataccagggacgaaagctaaggagatatgt
gctcttttaatgcaaaatggcgctgatccgcatttaagaaattataatcgcgagtcatct
gttgctgagggagaaccgatgcaaggtgtaaaaatcgaaacacaatcggaagatgaaaat
ttggaagaatgcactggacaatcgtcttttgatttagcctcaaataagccagatatttta
caactcgtttctggtcaaaacgagatattagagagcatgattaaagaggaaaatatagac
gacatacataaagtttggatggatgtagaacaggaaaagcatttagcaaacattcttgat
gagacaaaaggatggaaaaaattggcaaatttttttaattttgagtatttaatgaatgtt
tttgaacagagcaaaactaattcgacattgcttcttttgaattatatcgctatacaaacc
aatacgtctctcagcgaattgcagagaatatttcaagatataggcgaagaagttgctgcg
acatatatgagtcaaattttatcagtgaaacaagagaataaattttaa
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