Cardiocondyla obscurior: 139105213
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Entry
139105213 CDS
T10704
Symbol
Nbs
Name
(RefSeq) nibrin isoform X1
KO
K10867
nibrin
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139105213 (Nbs)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cobs03032
]
139105213 (Nbs)
03400 DNA repair and recombination proteins [BR:
cobs03400
]
139105213 (Nbs)
DNA replication proteins [BR:
cobs03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
139105213 (Nbs)
DNA repair and recombination proteins [BR:
cobs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
139105213 (Nbs)
BRCA1-C complex
139105213 (Nbs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIBRIN_BRCT_II
FHA
BRCT
Motif
Other DBs
NCBI-GeneID:
139105213
NCBI-ProteinID:
XP_070517301
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All DBs
Position
LG08:2555020..2559528
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AA seq
701 aa
AA seq
DB search
MWCFKGPKDVYVYILPNQQKSFGKSLSDIKLEDDVSISRLHAIVSVEPSETSQIQSECTI
CDKSKYGTFLKRKNKKYKLSSNTKFVLNAGDVIQFGLKDTIFLVLYHSFIIAKSSLNEGD
TNKLRGIAHDLQATLFESWKRVCTHLTVPEILLFTPKLAYALASAKPIVTIAYWEKVLEA
IKEFKKLPEIDDFLPNLKEKWVTSENSKIFLPNEERKTLFKGLSFIYFCANQYSIYAPLI
AAAGGKSCIYPTKKPLTPRDLIAKNAIVIQQSANDSLNATQIVATDYPIIYRELKAAKRR
MISDTEIPLAILRCTTEMYCNPTYTFAKFLNVETQKGLFSDVISEDTQDIINTNTKQVKR
KIIPETCEFLNDTNVLKKIGLNENESNVSNKDGNIDTIRNTNNKKIKCKIIPETCNSQIT
NISGSSSSFYENEIKCISNNESNISMNNTQSDENKSMKRETNSKTYNFQNKNILTRFFHE
SEENQCYLPDSNESNTSDVVKNIFSDKNSNAEVEIVFDRSKFEDNFTTERQEPQNDKSHE
NLKINKKSAICKNVNLEKETTSIADEVKSNDKENSKNTRILHVAFTKETNHNEINITKGK
ENNLLEKDDGEVELQDLKKQNMSLVNETRNRSEKIKDIKKDKVQTKNNKIEQILKTEANK
TYLNQGSVDKILRKDVPCGKKFKKMSVIKPEKMLRMDDFVL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgttttaaaggacctaaagacgtttacgtttatattttgcctaatcagcaaaaa
tcatttggtaagtcattgagtgatattaagctagaagatgacgtatctattagtagactc
catgcaatagtttctgtagaaccatcagaaacatcacagatacaatctgaatgtactatc
tgtgacaaatccaaatatggaacatttcttaaaagaaaaaataaaaaatataaattgtca
tctaatactaagtttgttttgaatgctggtgatgtaatacagtttggactaaaggatact
atttttttggtattgtatcattcatttataattgcaaagtctagcttgaatgaaggagat
acaaataaattaagaggtattgcacatgatttacaagcaacattgtttgagtcatggaaa
agagtttgcacacatttgacagtacctgaaatcttattatttactccaaagttagcctat
gcattagcatctgccaaacctatagttacaattgcatattgggaaaaagttcttgaagcc
atcaaagaattcaaaaaattaccagaaattgacgattttttgccaaacctaaaagagaaa
tgggtgacaagtgaaaactctaaaatattcctaccaaacgaagaacggaaaacattattt
aaaggcttgtcgtttatttatttttgcgcaaaccaatattctatatatgcaccattgatt
gctgcagcaggtggaaaatcatgcatctatcccacaaagaaacctttaactccccgagat
cttattgccaaaaatgctatcgttatacagcaatctgccaatgattctttaaatgctact
caaattgtcgcaacggattatccaataatttatcgtgaactaaaagctgccaagcgcaga
atgatttctgataccgaaattccactcgcaattttacgttgtaccacagaaatgtattgc
aatccgacatatacattcgccaaatttttaaacgtagagactcaaaaaggtcttttctct
gatgtaataagcgaagatactcaagatattattaataccaatacgaaacaagttaaaaga
aaaataattcctgaaacttgcgaatttctaaacgatacaaatgttctaaaaaagattggt
ttaaacgaaaacgaaagtaatgtttctaataaggacggtaatattgacacaatacggaat
actaataataaaaaaatcaaatgcaagataattcctgaaacttgcaattctcaaattact
aatatttcaggaagttccagttctttttatgagaatgagataaaatgtatatctaacaat
gagagtaatatttcgatgaacaatacacagagtgatgagaacaaatcaatgaaacgcgaa
acaaatagcaaaacttataattttcaaaataaaaacattttgactcgattttttcacgaa
agtgaagaaaatcagtgctatcttcccgatagtaatgaaagtaatacaagcgacgtagtg
aaaaatattttttctgataagaacagtaatgcagaagttgaaattgtttttgatagaagc
aaatttgaagacaattttactacagagcgacaagagccacaaaatgataagtcacacgaa
aatttaaaaataaataagaaaagtgcaatttgcaaaaacgttaatttagaaaaagaaaca
acttcgattgctgacgaagttaaatcaaatgataaggagaattctaagaacacaagaatt
ttacatgttgcatttacaaaagaaactaatcataacgaaattaatataacaaaaggaaaa
gagaacaatttacttgaaaaagatgacggtgaagttgaattgcaagatttgaaaaaacaa
aatatgagtctggttaacgaaactcgaaatagatctgaaaaaattaaagatattaaaaaa
gataaagtgcaaacaaagaataataaaatagaacagattctaaaaacagaagctaacaaa
acttatctaaatcaaggatctgtggataagatattacgaaaagatgtaccgtgtgggaaa
aaatttaaaaagatgtctgttataaaaccagagaagatgttaagaatggatgactttgtt
ttgtga
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