Cardiocondyla obscurior: 139105217
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Entry
139105217 CDS
T10704
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139105217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cobs03041
]
139105217
03009 Ribosome biogenesis [BR:
cobs03009
]
139105217
Enzymes [BR:
cobs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139105217
Spliceosome [BR:
cobs03041
]
Complex A
U1 snRNP components
U1 related factors
139105217
Complex B
139105217
Ribosome biogenesis [BR:
cobs03009
]
Eukaryotic type
Pre-60S particles
Helicases
139105217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
PRAI
Motif
Other DBs
NCBI-GeneID:
139105217
NCBI-ProteinID:
XP_070517310
LinkDB
All DBs
Position
LG08:complement(2795268..2801883)
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AA seq
617 aa
AA seq
DB search
MAYGERERSDRRGGGGGGGGGARGGGGRFGSRDGGGGGGGGRFSSSGNRDSSFGNNNFKN
RQPGERLRKPRWDMSTLPQFRKDFYQPHPNVMARSIHAVEAYRSNKEITVKGTNVPGPNI
YFEEGGFPDYVLNEIRRQGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIV
HINHQPRLSRNDGPIALILAPTRELAQQIQQVASDFGMSSQVRNTCIFGGAPKGPQARDL
ERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQ
TLMWSATWPKEVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVCEEYEKESKLMKLLE
EISNEPENKTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDYVLNQFRNSRSAI
LVATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPNNAHKAG
DLIQVLEEAKQVVNPKLYDLSRNPGVYKRGRYGGRSGGGGGGRGSGGRGGGSRSARGGRD
TGDRGGRFDRSSGTGASDRGNKWSGSSSGGMGGASYGSGKSFPQNSFGSGTSGGGSSSYS
QNSSGYGGSSYRQQNGY
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcatacggcgaacgcgaacgttccgatagacgaggaggaggcggtggtggcggcggc
ggtgcacgaggtggaggaggtcgatttggtagtcgtgatggaggcggaggtggaggaggt
gggagattcagcagcagtggaaacagagatagcagttttggaaacaacaactttaagaac
cggcaacctggggagcgcctacgtaaaccaagatgggacatgagcactctgccacagttt
agaaaggacttttaccagccacatccgaacgtaatggcacggagcattcacgccgtcgaa
gcgtaccgttcgaataaagaaataactgtgaaggggactaacgttccaggtccgaatatt
tattttgaggaaggtggtttcccagactatgttctcaacgagattcgtaggcagggattc
ggtgaaccgaccgcgattcaagcacagggttggcccattgcgttgtccggtcgggatatg
gttggtatagcgcagacgggctcaggaaagaccctggcatacattttgccggcgatcgtg
catataaatcatcagcccagactgagcagaaatgacggtcccattgcacttattttggcg
ccgactcgagaattggcgcaacaaattcaacaagtagcgtcggattttgggatgtcttct
caagtacgaaacacatgcatcttcggtggcgctccgaaagggccacaggcgcgtgatctc
gaacgtggggtagaaatttgcatcgccactccaggtcgtctcatagatttcttggaacgc
ggtaccacaaatttacgtagatgtacatacttagtgctcgacgaggccgatagaatgctc
gatatgggcttcgaaccacaaattaggaaaattgtagaacaaatacgtcccgatcgtcaa
actctcatgtggtcggctacgtggccgaaagaagtgcgtaatctcgcagaagagttccta
acggattacatccagatcaacatcggctctctacaattggctgccaatcacaatattctg
caaatcgtcgatgtgtgtgaggaatatgaaaaggaaagtaaacttatgaagctgctggaa
gagatctcgaatgagccggaaaataagactataatatttgtcgaaactaaaaggaaagtg
gacgatataacgagagctattaatagatacggatggcaagcgattggtattcacggagac
aaaagtcagcaagaaagagattacgtattaaatcagttccggaatagcaggtctgccatc
cttgtggctaccgacgtcgcggcaagaggtttagatgtcgaggatgtcaaatttgtgata
aacttggactatccgtccaactctgaagactatgtgcaccgtatcggacgtactggtcgc
tcacaacgtacaggaaccgcgtacgcctttttcacgcccaacaatgcccataaggctggg
gacttgatccaagttctagaagaggccaagcaagtggtcaatccaaaactgtatgattta
tctagaaatcctggcgtttataagagaggacgatatggtggacgcagcggtggtggaggt
ggtggacgaggatctggaggacgcggtggcggttcacgaagtgctcggggaggccgtgat
acgggtgatagaggcggaagattcgaccgctcttccggtactggcgcgagtgatcgcggc
aacaaatggtccggaagcagtagcggtggcatgggcggtgctagttatggaagcggtaaa
tcgttccctcaaaacagctttgggagtggaacttccggcggtggctccagtagctacagt
cagaacagtagcggctatggtggaagcagctacagacaacaaaacggctattga
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