Cardiocondyla obscurior: 139105218
Help
Entry
139105218 CDS
T10704
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139105218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cobs03041
]
139105218
03009 Ribosome biogenesis [BR:
cobs03009
]
139105218
Enzymes [BR:
cobs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139105218
Spliceosome [BR:
cobs03041
]
Complex A
U1 snRNP components
U1 related factors
139105218
Complex B
139105218
Ribosome biogenesis [BR:
cobs03009
]
Eukaryotic type
Pre-60S particles
Helicases
139105218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
139105218
NCBI-ProteinID:
XP_070517311
LinkDB
All DBs
Position
LG08:complement(2802461..2806736)
Genome browser
AA seq
612 aa
AA seq
DB search
MFIRDQSRTCYSSGTVKVGTNPIRGSTDNGRGTSRLGTVRGNANNMRGGLKGKQPGRSLN
KVNWDLHDLQPIHKDFYVEHPAVRNRSKEEVHLFRKNAEITAKGENIPNPIQYFQEGNFP
PYVMEGINREGYSQPTPIQAQGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHITHQPLI
NSGDGPIVLILAPTRELAQQIQEVANSFGETAAVRNTCIFGGAPKGPQAHDLERGIEICI
ATPGRLIDFLEKGTTNLCRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW
PKEVRTLAEDFLTDYVQLNVGSLTLSANHNITQIIDVCHEYEKDSKLYRLLQEIGTEKEN
KTIIFVETKRKVDDITRNIRREGWQAMSIHGDKNQQERDHVLQEFRSGRAPILVATDVAA
RGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRKRQTGTAYAFFTTHNMKHAGDLIEVLRE
AGQNVNPRLSEMAEMAKAGNLSGRSGKRFGGGVSGNGAERNNSRRGSDKGRGGSSSRGRG
SSHNATSYQLSSNIYSDSDYNNYNCIKQNNSLGQSAAYGYSTQRNYEQESVPQNYRGDDN
YGNRYSYKSTTY
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtttatccgagatcagagtaggacctgctatagcagtggtactgtcaaggtaggtaca
aatcctatcagaggcagtaccgataatggacgcggtaccagcaggcttggcacagttagg
ggaaatgccaataatatgcgaggaggattaaaaggaaagcagcctggtagaagcctcaac
aaagtaaactgggatcttcatgatttacagccaatacacaaagacttttatgtagagcat
cctgcagttagaaacagatccaaggaagaagtccatctgtttcgaaagaatgctgaaata
actgcaaaaggtgaaaacattcctaatcctatacaatattttcaagaaggaaattttcca
ccttatgtaatggaaggtattaatagagaaggatactcgcaacctactccaattcaagct
caaggatggcctattgcccttagtggcagagatcttgttgcaattgctcaaactggctct
gggaagactcttgggtatattttacctgcaattgtgcatattacacatcaaccgcttata
aacagtggtgatggtccaatagtattgatcttggctccaactagagaattagctcaacaa
attcaagaagtagctaatagttttggtgagactgcagctgtaagaaatacatgtatcttc
ggcggggctccaaagggaccacaagcacacgacttggaaagaggcattgaaatatgcata
gctacaccaggtagacttatagatttcctagaaaaaggaactactaacttatgtagatgt
acttatctagtacttgatgaagctgatcgcatgttagatatgggattcgaacctcagatt
cgaaaaataattgagcagatacgtcccgacaggcaagtgttaatgtggtcagcaacatgg
cctaaggaagttcgcacacttgcggaggattttttaacggattatgtgcaactcaatgtc
ggctctttaactctatcagccaatcataacatcactcaaattatcgatgtttgtcacgaa
tatgaaaaagactcaaagttatatagattacttcaagaaatcggcactgaaaaagaaaat
aaaaccattatatttgtcgaaactaaacgtaaagttgacgatatcacgagaaatattagg
cgcgaagggtggcaagctatgagtattcacggtgataaaaatcaacaagaaagggatcat
gtattacaagagttccgcagcggaagagcaccgattttagtcgcgactgatgtagccgct
agaggcttggatgtggatgatgtgaaatacgtgataaatttcgattatccatcttcgtca
gaggattacatacatagaatcggtcgaactggacgtaagcgacaaaccggaacggcatat
gcattttttacaactcataatatgaagcacgccggagacttgatagaagttttacgagag
gccggacagaatgttaatccacgtctcagtgaaatggctgagatggccaaagcgggaaac
ttgagcggcagaagtgggaaacgtttcggtggtggtgtttctggtaatggcgctgaaagg
aataatagtcgacgaggcagtgataaaggaagaggcggtagttcatcaagaggaagaggt
tcttctcataacgcgacttcctatcagctttcttcgaatatttattccgattcagattat
aataattataattgtataaagcaaaataattccttaggtcagagcgcagcgtacggctat
agtacgcaaagaaattatgagcaagaaagtgtgcctcaaaattatagaggtgatgataat
tacggcaatcgttattcttacaaaagcacaacttattaa
DBGET
integrated database retrieval system
