Cardiocondyla obscurior: 139105370
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Entry
139105370 CDS
T10704
Symbol
Sin3a
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139105370 (Sin3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cobs03036
]
139105370 (Sin3a)
Chromosome and associated proteins [BR:
cobs03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
139105370 (Sin3a)
REST complex
139105370 (Sin3a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
139105370 (Sin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Tricorn_C1
Motif
Other DBs
NCBI-GeneID:
139105370
NCBI-ProteinID:
XP_070517521
LinkDB
All DBs
Position
LG09:complement(5219757..5237836)
Genome browser
AA seq
1520 aa
AA seq
DB search
MKRARGLDDVTSPPAKHSSVSAASGIGGGGGSLDYHSSSGIGVVVPGQAVRSVTSKEMPA
SIQFGTAQAQQQYTGAIVVPTAAPSPIKQTSGSAGGLGSTCSGSGITTGGSLHSGIGGGN
SHTMTSQQPTSGSQNQVHTQQQSTIRHKVHSGNITPLASTPPGSNLGGGSGSQQFQRLKV
EDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSNLFKGHPELIVGFN
TFLPPGYKIEVQANEQGYAFQVSVSMPSPTATHTATLSQHHCTVNVGSPPVASPPTQPAK
APPVLQIMQGSGNIHHTLANSITTNSLTVHAPSPPPVSSVYNNSHVSTAQVQAVSQALSQ
ADGVSTSGQTQQSQPVEFNHAINYVNKIKNRFQGQPEKYKRFLEILHTYQKEQRNLKESS
HMGGTSSGATGGTKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQGSLSAMFQTN
KTTSVNDHTTIVKKPVGLKTPYNNSGTISRDLREGSSTAGLERDNRDHRERERERDRSNV
RDINSGQKCGHSTGQLKRSPSFSTSAASGNSHHIQHGPPPTKKHKVASMRDITIAEAGKY
GTLNDYAFFDKVRKALRSQDVYENFLRCLVLFNQEIVSKSELIQLVTPFLGRFPELLHWF
KDFLGYLSDSSSTTVTNAGNAVGIETFPNSIVRSHQERPQGDLAIEIDYTACKRLGASYC
ALPKSYIQPKCSGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEESIYRCEDERFEL
DVVIETNASTIRVLEGVHKKMNRMTQEEIQKFKLDECLGGCSPTIHQRAIKRIYGDKASD
IIEGLKRNPAVAVPVVLRRLKAKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQN
DVKALRSKSLFNEIETLYDERHEQGDDGNGDGQGNSGPHLVLPYKDKSVLDDAANLLIHH
VKRQAAVHKEDKQRIKLLLKHFIPDLFFHPRQELSDDERDEDDEKEDVNTATCNNSQSTT
TASSLGGLQANRSKASVSPNTSSAINKSEPDVKVPIHALSSDPEEAYTLFMGSNNWYLFL
RLHHILCERLTKMYDKAFALAEEESKYKQQRKESTAVALRLKPKSEIEIEEYYSAFLDMV
KNVLDGNMESTAYEDTLREMFGIHAYIAFTLDKVVNYAVRQLQHLVSDSVCQQCMDLFQK
EQRQPKESSGAGGLCATAYMRLSAELSYQRKAEKVMADENCFKIYIYKKDCKMTMELLDT
EGDETVDNGCRERDREGVTVSEKWSTYVERFSAPADQTSPKDIPALTENEQTTNHPVSSD
QAARGGRGRKRKNTDISKKIDGNNWNSSGRASTGRKPIFLYRNIKSYQKHAEKLMRGKTS
SLNANHSDKVTDSSDTPDIINSDETQCRFNPNSYTMLFIIHKDRFLYKQNSMHRARRRHP
AVTKRKDSKFHHWHASWVSKNGTDLQHRLCQDWLMGRYENLIPHRTRVITDNDQTRSPYR
QYNRFRVERLQSDLLTETSI
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgctcgtggactggacgacgtaacgtcaccaccagcaaagcattcgtcagtg
agtgcggcaagtggtataggtggtggaggtggtagtttagattatcactccagcagtgga
ataggtgttgttgtacctggtcaagcagttcgttctgttacttcaaaagaaatgccggcg
agtatacaatttggtactgcacaagctcaacagcaatatactggggcgattgttgtgcca
accgcagcaccatctcccattaagcagacaagcggctctgcgggagggctcggttccaca
tgtagcggcagcggtataaccactggtggtagcctgcatagtggaataggtggtggtaat
agtcatacaatgacttcccaacaacctacatcaggatcgcagaatcaagtccacacgcaa
caacaatcgacaataaggcataaggttcattctggcaatataacacctttggcttctact
ccacctgggtctaatctaggaggaggaagtggatctcaacagtttcagagattaaaagtg
gaagatgcgttatcttatctagatcaagtgaaatacaaatttagcgatcaaccacaggtg
tataatgacttcttggatatcatgaaagaatttaaatctcaaagtatagatacgccaggt
gttataactcgagtgagcaacctctttaaagggcatcctgaactcattgttggtttcaat
acatttctcccaccaggctacaaaatagaggtacaagcaaacgaacaaggatatgctttt
caagtatcagtcagtatgccgagtccaacggcaacgcacaccgctacgttatcgcagcat
cattgtacggtgaacgttggttcgccgcctgtagctagtccaccgacgcaacctgcaaag
gcacctcccgttttgcaaataatgcaagggtcgggaaatatacaccatactttagcaaac
agtattacaactaacagcttgactgttcacgcgccgtcaccgccgccagtatcatcagtg
tataataattcacatgtgagcactgcacaagtgcaagctgtcagtcaggctttaagtcaa
gcggatggtgtgtcgactagtggacaaacgcaacaaagccaaccggttgaatttaatcat
gcaataaactatgttaataaaataaagaatcggtttcaagggcaaccagaaaaatacaaa
cgttttttagaaatattacatacgtatcaaaaagaacagcgaaatttaaaggagtctagc
catatgggaggtacaagttcaggtgcaactggtggaacaaaacacttaacagaagcagaa
gtttatagtcaagttgctaaactgtttgaaaatcaagaggatttacttgcagaatttgga
caatttttgcctgatgccactaatcagcaaggctcattgtctgccatgtttcagactaat
aagacgacgtcggttaacgatcatacgacgattgtcaagaaaccagttggacttaaaaca
ccttataataattctggaactatatcgagagatcttcgagaaggtagcagtacggctgga
ttggaacgtgataaccgtgatcacagagaacgagaacgggagcgagatagatcgaacgta
agagacattaatagcggccagaaatgcggacacagtactggacaattgaaaaggagtccg
tcattctcgacttcggcagcgtcaggaaattctcatcatatacagcatgggccaccacct
acaaaaaagcacaaggtggcttcgatgcgcgatattactattgcggaagctggcaaatac
ggtaccctgaacgattatgctttctttgataaggtacgaaaagcgctcaggtcgcaagat
gtttacgaaaattttcttcgatgccttgtactttttaatcaagaaatagtatcaaaatca
gaactcattcagctggtgacaccgttcctcggtcggttccccgaattactacattggttt
aaagattttcttggatacttatccgattcgtccagtactaccgtaacaaatgcaggaaat
gctgtaggcatagagactttcccaaatagcattgtgcgcagtcatcaggaacggccacaa
ggtgatttagcgatagaaattgattatacagcatgcaagcggctgggtgcgtcgtattgt
gcattaccaaaatcatacattcagccaaagtgcagtggtagaacgcaattgtgtaaagaa
gtccttaacgatacttgggtgtcatttccaacttggtcagaagacagtacatttgtaacg
tcaaggaaaacgcaatacgaagaatccatatatcgatgcgaagatgaacgttttgaactg
gatgtcgttatagaaactaatgcgtcgacaattagagtactcgagggcgttcataaaaaa
atgaacaggatgacccaagaagagatacagaaattcaaactcgacgaatgtttgggtggt
tgctctcctacgattcaccaacgagcgataaagaggatatacggcgataaagcttccgat
attatagagggtctcaaaagaaatcctgcagtagctgtgcctgttgtactccgtcggcta
aaggctaaagaagaagaatggcgggaagcacaaaagggatttaataaaatctggagagaa
caaaatgaaaagtattacttgaaatctttggatcatcaaggaattaatttcaaacagaac
gacgtcaaagcattgagatctaaaagtctgttcaatgaaattgaaacgctatatgacgag
aggcacgagcagggtgacgatggtaatggtgatggtcaaggaaacagtggcccacatctt
gttttaccgtacaaagacaaatctgtgttagatgatgctgctaatctcttaattcatcac
gtcaaacggcaagccgctgttcataaagaagataaacagcggataaaacttttattgaaa
cattttatacctgatctttttttccatccccgccaagaactcagtgatgacgaaagggac
gaagatgatgaaaaagaagatgtgaatacggcaacgtgtaataattctcaatctacgacg
actgcatcatcgttgggtggcttgcaagctaataggagtaaagcctctgtatcgccaaat
acatcttccgctattaacaaaagtgaacccgacgttaaagtacccattcatgctctctcg
agcgatcccgaggaagcgtatacgctttttatgggtagtaataattggtacctctttttg
aggttacaccatatactttgtgagaggttaacgaaaatgtatgacaaagcatttgctctt
gccgaggaagagtcaaaatataagcaacaacgtaaggaaagtacagcagttgctttaaga
ttaaaaccaaaaagtgaaattgaaattgaggaatattattctgcctttttggatatggtt
aaaaatgtcctcgacggaaatatggaaagcacagcgtacgaagacacgttacgagaaatg
tttggtatacacgcctacattgcctttactcttgataaagtcgttaattatgctgttaga
caattgcagcatctagtctcagattctgtttgccagcaatgcatggatttatttcaaaaa
gagcaacgtcaacctaaagaaagtagcggagccggtgggttgtgcgctacggcctatatg
agattaagcgctgagttatcgtatcaacgcaaagcggaaaaagtaatggcagatgaaaac
tgtttcaagatatacatatataaaaaggactgtaaaatgacgatggagttgttagataca
gagggcgacgaaacagtggataatggctgtagagagagagacagggaaggcgttacagtt
tctgaaaaatggtcgacgtacgttgagagattttctgcaccagctgatcaaactagcccc
aaagatattcctgccttaacagagaatgagcagacgaccaatcatcctgtgagtagcgac
caggcagcaagggggggaaggggcagaaaacgcaagaacactgacattagcaagaagatt
gacggaaataattggaattcctcgggcagagcgtcaacaggacgtaaacctatttttctc
tatcgtaatattaaatcatatcagaagcatgccgagaaattaatgagaggaaagacgtct
tcgcttaatgctaatcattcagacaaagtcacagactcaagtgatactccagatataatc
aattccgacgagacgcaatgtagatttaatcccaacagctataccatgctgttcattatc
cataaagatagatttctttacaagcaaaactccatgcaccgtgctagacggcgtcatccg
gccgtgacaaaacgcaaagattccaagtttcatcactggcacgcgtcctgggtgtctaaa
aacggcacagatcttcagcatcgattgtgtcaagattggttaatgggacgatacgaaaat
ttgattcctcacaggacacgagtgataactgacaacgatcaaactcgttccccctatcgg
cagtacaatcgtttccgagtagaacgcctgcaatctgatctgttgacagagacgtccatt
taa
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integrated database retrieval system
