KEGG   Cardiocondyla obscurior: 139105510
Entry
139105510         CDS       T10704                                 
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
cobs  Cardiocondyla obscurior
Pathway
cobs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cobs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139105510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cobs03041]
    139105510
Spliceosome [BR:cobs03041]
 Complex C
  Other components
   Step II factors
    139105510
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 EIF3I WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_EIPR1 WD40_RFWD3 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_SCAP PQQ_2 Beta-prop_NWD2_C WD_LRWD1
Other DBs
NCBI-GeneID: 139105510
NCBI-ProteinID: XP_070517759
LinkDB
Position
LG09:complement(7240936..7244383)
AA seq 564 aa
MLALKDYGSSDEGSETENVEGMSMLSGKDKFTTNLQICSAPEVVPTGTELCIKHIDSTAT
EVAYNPKYEELFGPEVGPENPFKTQQQHAVKNMLSGYVESAHVNEFQFENQRRTFASYGY
ALDPTIDGSVDEGRVLIGATETAEELDNKTVFENTALRASDKRKRHRNDNPSDIEGFLGP
WGGYIDEKRVIKPSEEEAAELEEILAKRNKRGKQTEEKPLEEKTILHIKNSVDYQGRSFL
HAPQDVGVNLRSESPPDRCFLPKAQIHTWEGHTKGISQIRWFPHTAHLLLSCSMDCRVKL
WEVYKDRRCVRTYYGHRQAVRDVSFDNDGKRFLSAAYDRYVKLWDTETGACISRFTSRKI
PYCAKFNPDPDKQHLFVAGTSDKKIICWDIRSGEITQEYDRHLGAVNTITFVDENRRFVT
TSDDKSLRVWEWDIPVDMKYIADPSMHSMPAVTPSRNQKWLACQSMDNKIVIFSALNRFK
MNRKKTFTGHMVAGYACGLDFSPDMSYLVSGDADGKCYIWDWKTTKLYKKWKAHDGVCID
VLWHPHEPSRLATAGWDGKIKYWD
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgcttgcactaaaagattacggtagcagcgatgagggtagcgaaacggaaaatgttgag
ggaatgtccatgctttccggtaaggataaatttacgaccaatcttcaaatttgctcggct
ccagaagttgtacccactggaacagaattgtgtataaaacacatagactcaactgcgacg
gaagttgcatataatccaaagtatgaggaactttttggacctgaggtaggaccagaaaat
ccatttaaaacgcagcagcagcatgcagtgaaaaatatgctgtctggttatgtagaaagt
gcacatgtaaatgaatttcaatttgaaaatcaaaggagaacatttgctagttatggatat
gcacttgatccaacaatcgatggcagtgtggatgaaggcagagttttaatcggtgcaaca
gaaacggcagaagaattggataacaaaactgtttttgaaaatactgctttgagagcttcg
gataaacgaaaaaggcacagaaacgacaatccatcagatatagaaggttttttaggtcct
tggggtggttatattgacgaaaaacgagttatcaagccaagcgaagaagaagctgctgaa
ttagaagaaattttagctaaacgaaataaacggggaaaacaaacggaagaaaaacctctc
gaagagaaaactatattacatatcaaaaacagtgtggattatcaaggacgttcgtttttg
catgcgccacaagatgtaggtgtgaacttgagatcagaatcaccacctgatcgttgtttt
ttaccaaaagcgcaaattcatacgtgggaaggacacaccaaaggcatctcgcaaatccgt
tggttcccacatactgcacatttattactgtcttgtagcatggattgtcgcgtaaagttg
tgggaagtatacaaagacaggagatgcgttcgtacgtactatggacataggcaagcagtg
cgagacgtaagttttgacaatgacggtaagcggttcttatcggcagcttatgatcggtat
gtgaaactctgggacacagaaacaggagcttgtatcagtcgctttacgagtagaaaaatt
ccatattgcgccaaatttaatcccgatccagataaacagcatctttttgtagctggtact
agcgataaaaaaattatttgctgggacatacgttctggtgaaataacacaggaatatgat
agacatttaggtgctgtaaataccattacgtttgtcgatgaaaacagacgattcgtcaca
actagcgatgataaaagtctccgggtttgggaatgggatattcctgtagatatgaaatac
atagctgatccatccatgcattctatgccagctgtgaccccgtcacgaaatcagaagtgg
cttgcttgccaaagcatggataataaaattgttatattttcggcattaaaccgattcaaa
atgaatcgaaaaaagacattcacagggcacatggttgcaggatatgcgtgcggtttagac
ttctcgccagatatgagttacttggtgtctggtgatgcggacggtaaatgctacatatgg
gattggaaaacgacaaagttatacaaaaagtggaaggctcacgacggtgtgtgcattgac
gttttgtggcatcctcacgagccttctagactcgctactgctggatgggatggcaaaatt
aagtactgggactaa

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