Cardiocondyla obscurior: 139105643
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Entry
139105643 CDS
T10704
Symbol
Prp39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cobs03041
]
139105643 (Prp39)
Spliceosome [BR:
cobs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139105643 (Prp39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
ARM_TT21_5th
NRDE-2
TPR_11
PPTA
HAT
Motif
Other DBs
NCBI-GeneID:
139105643
NCBI-ProteinID:
XP_070517954
LinkDB
All DBs
Position
LG09:complement(2595251..2601666)
Genome browser
AA seq
1039 aa
AA seq
DB search
MSSASGDEAEIALAEPVRRTRSGRARKTAVVAKKSPVKKLLARATRYPRKVHEVEEVEEV
VEEETTSTLEDTMMENMPENGVQRLSDVIVDQNREDDTTMLQLQLEDSEDGNIHEISMTQ
AEEMEQVVEDMRHSAMRSEGMIIEDSSMDKVEMLAEHGDIEMEEQDVSNDDSNQQRVLID
FQQVINEEDGSTMTQEILEGEDSENISMHTGRIQVMEIDDSQQEMSEEIADTMTGKVEEP
DMEILQSDSLPRIEITAAENENAHEYINEDDAKKTEPDTEAVSEDELPTEAAAKEPETEA
VSDEELPVAAPADLGETESVSEDELPPDSDKKKKSGAKSLNKTPEKKTKVEGGTKRKLNA
EGEYDPSSPTSENNDETPAKKVALSSDTETGDKQEIKPASPKKKTLPELEKYWKAVNEDP
SDFTGWTYLLQYVDQENDAEAAREAYTKFLERYPYCYGYWRKFADYEKKKGNPDNVQTVF
DQGLKAISLSVDLWLHYINHCKTVYEKDEEKLREQYERAIQACGLEFRSDRLWESYIKWE
TEGKRLSRVTALYDRLLSTPTLGYTSHFEAFQEFVSSNLPNRILSVDDFLTLRAEVKALL
KSDDATATSAADDAPPGEEPPPHELPPTDEETRAIREKIISSRRKMHKANVNAVAARWSY
EEGIKRPYFHVKPLERCQLKNWKEYLDFEIEQKDQNRIVILFERCLIACALYDEFWMRFV
RYLESLKGDSTEKIRDVYSRACMVHHPKKPNLHLQWAIFEEGQGNFEKAASILENIDNVL
PNMLQVAYRRINLERRRGDLEKACILYENYISNSKNRTIANNIAVKYARFLCKVKDEVDK
AIKVLMKATDKDKDNPRLYLQLIDLAMQRTPVDTQEIVGYMDMFIEREHADLEQRVLFAQ
RKVEFLEDFSPDIRQVLKAHEQFQKCIKQAKERKKTKGDDNKTDSSPPKKKADQSNVPPS
PSVGSQSSYQYSSGPSGPYQSTQQFQGGQYGGQGGYQQGYQQYPPPSDPNYANYQNWQYG
QGGPQAYGPYNQWGSYNYY
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagcgagcggtgacgaggccgagatcgcactggcagagccagtgagacgcacg
agatcaggtcgggcacgaaaaacggcggttgtggctaaaaaatcgcctgtaaagaagctt
cttgctcgagcgacacgctatccaaggaaggtccatgaagttgaggaggttgaagaggtt
gtggaagaagaaactacatctacgttggaagatactatgatggaaaatatgcctgagaat
ggagttcaacgtttatcagatgttattgtcgaccaaaatagagaggatgatactaccatg
ttgcaattgcaattagaagattctgaagatggtaacatacatgaaataagtatgactcaa
gcagaagaaatggagcaagttgtagaagatatgcggcattctgctatgagatcagaaggc
atgattatagaggacagtagtatggacaaggtagagatgctggctgaacatggagacatt
gaaatggaggaacaagatgtcagcaatgacgattcgaatcaacaacgcgtattgatagat
tttcaacaagttattaatgaagaagatggtagtacaatgacacaagagatattagaagga
gaagattcagagaatatatctatgcataccggcagaatccaagttatggaaattgatgat
tcacagcaagaaatgtcggaagaaattgcagatacaatgacaggcaaagtagaagaacct
gacatggaaattttgcagagtgattctttaccgcgtatagaaataactgcggctgaaaat
gaaaatgcacatgaatacataaacgaagatgacgcgaagaaaaccgaacctgatacagaa
gctgtgtcagaagatgaattaccgaccgaagctgctgccaaggaaccagagactgaagca
gtttctgacgaagaattgccagttgctgctccagcagatctaggtgaaactgaatctgta
tctgaagatgaactaccaccggatagtgacaaaaagaaaaagagtggagcgaaatcactg
aataaaacaccagaaaagaaaaccaaagtagaaggcggaactaaacgtaaattaaacgcg
gaaggagaatatgatcctagttctccgacatctgagaacaatgacgagacaccagctaaa
aaggtcgctttatcaagtgatacagaaacaggagataagcaagagattaagcccgcatca
ccgaaaaagaaaaccttgcctgaactagagaaatattggaaagctgttaatgaagatcca
tccgactttacgggatggacgtatctcttacaatacgtggatcaagaaaatgatgcggag
gctgcacgtgaagcttacaccaaattcttggagcgttatccatattgctacggttactgg
agaaagttcgcagattacgagaagaagaagggcaaccccgataatgtccaaacggtattc
gaccaaggtctcaaagctatttcgctaagcgtcgatctctggctccattacatcaaccac
tgtaaaaccgtctatgaaaaagatgaagagaagctccgggagcagtacgagcgagccata
caagcttgtggacttgaattcagatcggatcgtctttgggaaagctacataaagtgggag
acagaaggaaaacgtttgagcagagtaacagcattgtacgatcgtttactatcgacacct
actcttggttacacctctcacttcgaagccttccaagaattcgtatcatccaatttacca
aatcgtatcctaagtgtggacgatttccttacgttacgcgccgaagtaaaggcccttctc
aaatcagatgacgccacagcgacgtccgccgctgatgatgcaccacccggagaggagccg
ccaccccatgagttaccacctaccgatgaggaaactcgtgccatccgtgagaagatcatt
agcagcagacgcaaaatgcacaaagcgaatgtcaatgcggtggcagcgagatggtcatac
gaggaaggaataaagagaccatatttccatgtaaaaccattggaacgatgtcagttgaaa
aactggaaggagtacttggatttcgagattgaacaaaaggatcagaatcgaatagtcatc
ttattcgagaggtgtcttatagcgtgtgcactttatgacgaattttggatgcgatttgtg
cgctatttggaatcgcttaaaggagatagcacagaaaaaattcgagatgtatattcgaga
gcttgtatggtacatcatccaaaaaaaccaaatttgcatttgcaatgggctatttttgaa
gaaggccagggtaactttgagaaggctgccagcatattagagaatattgataacgtatta
ccaaatatgctacaagtagcatatcgacgaataaatttagaacgtcgtcgtggagacttg
gaaaaagcgtgcattttgtatgaaaattatattagcaatagcaaaaaccgaacaattgct
aataatattgctgtaaaatacgcacgattcctgtgtaaagtcaaggatgaagttgataag
gcgatcaaagtattgatgaaggccactgataaagataaagataatcctagattatatcta
caattaatagatttggctatgcaacgaacaccagttgatactcaagaaatagtaggttac
atggatatgtttatagaaagagaacatgcagatcttgagcagagagtactttttgcgcaa
cgtaaagtagaatttttggaagacttcagcccagacattcgacaagtattaaaggctcac
gaacaattccagaaatgcattaagcaagcgaaagagagaaagaaaactaagggtgatgat
aacaaaaccgattcttcacctccaaagaaaaaagccgatcaatcaaatgtgccaccttcg
ccgtccgtaggatcacaatcttcataccagtacagcagcggtccgagcgggccttaccaa
tccacacaacaatttcaaggcggacagtatggtggccaaggtggttatcaacaaggttac
caacaatatccacctccatcagatcctaattatgctaactaccaaaactggcagtacggt
caaggcggccctcaagcatatggaccttataatcagtggggatcttacaattattattaa
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