Cardiocondyla obscurior: 139105769
Help
Entry
139105769 CDS
T10704
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139105769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139105769
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139105769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_THOC3
WD40
Beta-prop_WDR5
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Ge1_WD40
TAF1C_beta-prop
WDR55
Motif
Other DBs
NCBI-GeneID:
139105769
NCBI-ProteinID:
XP_070518151
LinkDB
All DBs
Position
LG09:complement(3412886..3415325)
Genome browser
AA seq
526 aa
AA seq
DB search
MLKILSLHDFEGPAFGDAAAVGLIEDVVHYCTYDALQDEMQPFAKYLRGYPEVSVTQEIL
ATRETAHAISAGELFLPIHDSIFKKIVNVWRERGLSEAIRFAAAADPEQITDVAHWVATK
LNWVLDLMDRGIYHRDVLLISGNGSVADIVATRDWNLSLVRCLSWHPHCARLAVAMRDDR
IRIFSQGLLGVPVLRHSAQKSVCCLSWRPHAGRELAVACYSGVLVWTIELGAASNLLSHA
IFLKQRNHVPVTNVAWHPQGDLLASCSPTDLNIMIWDVSKEEGVPLKRVGGGGICFTRWS
PCGLRLFSASCRNVFRVWNTGIPTPWRAERWTVPQGRVAAACFGPSLTLLFATTGDPATI
FSLPLQDTIFDVKKSINNDVKTAMRLIDLTKVNFSSDDNDDYITVGGRITSMEWDPSGKY
LAILFQDSPVIALVKTTLSHLSRIVEAQASCLIKGFPGEVPNCINFYQKRSSWICLTIAW
NSGRVQHFPIVENESKVDTSTHCTLLPQLTSPSGLYNFDICGYRQY
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagatactttcgctccacgatttcgagggcccagctttcggcgacgcggccgcg
gttggtttgatcgaggatgtcgtccattactgcacttacgacgccctgcaggacgagatg
cagcctttcgccaagtacttgcgtggatacccggaggtctccgtcactcaggagattctc
gcgacgcgcgagaccgcgcacgcgattagcgccggagaattgttccttcccattcacgac
agtatctttaaaaagatcgtcaacgtgtggcgagagagaggattgtccgaggcgatccgt
tttgccgcagctgcagatccggaacagattacagacgttgcacactgggtcgcgacaaaa
ttgaattgggtattggatttgatggacagagggatatatcacagagatgtattgcttatc
tcaggaaacggatctgttgcagatattgttgccacacgggattggaatttgtcactggta
aggtgtctatcttggcatccacactgtgctcgcctggctgtagccatgagagacgataga
atccgcattttctcgcaaggtctactgggtgtaccggtattgaggcacagtgcacaaaaa
tcagtttgctgtttaagttggagaccacacgccgggcgtgaattagcagtcgcttgttat
tccggagtattagtttggacgatagaattgggagcagctagtaatttacttagccacgca
atatttttgaagcaaagaaatcatgtacccgttacaaacgttgcatggcatccacaaggt
gatttgctggcatcttgctcgccaacagatttaaatataatgatctgggacgtttctaaa
gaagaaggggttcctttaaaacgtgttggtggaggaggtatatgctttacacgttggtcg
ccttgtggtttgcgattattttccgcttcatgcagaaatgtttttagagtttggaatacc
ggtattccaacgccatggcgtgcagaaaggtggaccgtacctcaaggccgtgtagcagct
gcatgttttggtcctagtttaacattgctttttgccactacaggagatcctgctacaata
ttctccttgccattgcaagatactatatttgatgttaaaaagtcaatcaataacgatgta
aagacagctatgcgtttaattgatttaacgaaagtaaatttttcgtctgacgataatgac
gattatatcacagtgggcggtagaataacttctatggagtgggatccatctggaaaatat
cttgctatcctcttccaggacagtccagttattgctttagttaaaaccactttaagtcat
ttatcacggatagtggaagcacaggcgagctgtcttattaaaggatttcccggagaagtg
ccaaattgcattaatttctatcaaaaacgttcgtcctggatttgtttaacaatagcatgg
aacagtgggcgcgtgcagcatttcccgattgtagaaaacgaatctaaagttgatactagc
acacattgtacgttgttaccccaacttacgagtccaagtggattgtacaattttgacatt
tgtggttacaggcaatattaa
DBGET
integrated database retrieval system