Cardiocondyla obscurior: 139105825
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Entry
139105825 CDS
T10704
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobs03000
]
139105825
Transcription factors [BR:
cobs03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
139105825
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
Homeobox_KN
HTH_Tnp_IS1
DUF6115
Motif
Other DBs
NCBI-GeneID:
139105825
NCBI-ProteinID:
XP_070518228
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Position
LG01:11038382..11120583
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AA seq
540 aa
AA seq
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MAHKGHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGR
YYETGSIRPRAIGGSKPRVATAEVVSKISLYKSECPSIFAWEIRDRLLQEGVCTNDNIPS
VSSINRVLRNLAAQKEQRQQQQQQQQGVGAVGVGVGAGSPAESVYDKLRLLNGQTTGWPR
PNPWYPSSAGSPFSSIQSSLSPSHCSSLPPDPADILHAKKVTELEGGAHSDETNSGGDNS
NAGSVSGGADDDQARLRLKRKLQRNRTSFSNEQIDALEKEFERTHYPDVFARERLAGKIG
LPEARIQVWFSNRRAKWRREEKLRTQRRDNPPPPPPQQQQQQQQQQQQQHTAGVSLVGTG
HPTPPPPSGILASQPPQAPPSPPRIHHGFAPTAVYPGIPSMPDSYSPMTSMPSFTMSGGT
QQNQHTTSSMSSLSTGGGMSPMGMTVGMTVGPSPGACLQQRDNGYSCGVARPPSYEPLHL
GYGARPTCSPTQPYHAASLNQYNQNASSTGLISPGVSVPIAVPGQPAPDMAAQYWSPRLQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcacacaagggtcacagcggggtgaaccagctgggaggtgtcttcgtcggcggtcga
ccgctgccggactcgacgcggcagaagatcgtcgagctcgcacactcgggtgcgcggccg
tgcgatatctcaagaatattgcaggtcagcaacggctgtgtctcgaagatcctcggcagg
tactatgagaccggatctataaggcccagggccatcggcggcagcaaaccgcgtgtggca
acggcggaggttgtcagtaagatctcgctctacaaaagtgagtgtccgtccatcttcgcg
tgggagattcgagatcgcttgctgcaggagggtgtgtgcacaaatgataacatcccaagc
gtgtcctcgatcaacagggtactgaggaatctggccgcgcagaaagagcagaggcagcag
cagcagcagcagcaacaaggggtgggcgccgtgggggttggcgtcggtgccggcagtcca
gcggagagcgtttacgataaactcaggctactaaatgggcaaaccaccggctggccgcgg
cccaatccctggtatccctcgagcgcgggaagtcccttttcgtcgatacaatctagtttg
agtccaagccattgttcgtctctgccgccggacccagcggacatcctgcacgcgaaaaaa
gtaaccgagctggagggtggcgcgcactcggacgagacgaacagcggaggtgacaacagt
aacgccggcagcgtgtcgggcggcgccgatgacgatcaggcgcgccttcgcctgaagagg
aaactgcagaggaaccgcacgagctttagcaacgagcaaatcgacgcgctcgaaaaagaa
tttgagagaacgcactacccggatgtgttcgctcgcgagagactcgccggcaagatcggt
ctaccggaggcacgaatacaggtctggttttcgaatcggcgggctaagtggcggcgtgag
gagaaattgcgcacgcaacggagggataatccgccaccgccgccgccgcagcagcaacaa
caacagcagcaacaacagcagcaacagcacactgccggcgtgagcttggtgggtactggc
cacccaacgccaccgccaccctcggggatactcgctagccagccaccgcaggcaccaccc
tcaccacccagaatacatcacgggtttgcaccgaccgccgtttaccctggaatacccagt
atgcccgactcgtacagcccgatgacgtcaatgccgagtttcaccatgtcgggcggaacc
cagcagaatcagcacacgacgagtagcatgtcttcgctgtcgaccggtggtggcatgagt
ccgatgggcatgaccgtgggtatgaccgtcggacctagtccgggagcgtgtctccagcaa
cgcgataacggctactcgtgcggggtcgcgagaccgccgagctacgagcccctgcacctg
ggatacggtgccaggccgacctgcagcccaacgcagccataccacgcggcgagcctcaat
cagtacaatcagaacgccagctcgaccggtctaatatcacctggcgtgagtgtgccgatc
gcggtgccaggtcaaccagcacctgacatggcggcgcaatattggtccccgaggctacag
tga
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