Cardiocondyla obscurior: 139105833
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Entry
139105833 CDS
T10704
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobs03021
]
139105833
Transcription machinery [BR:
cobs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
139105833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_19
TPR_8
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_10
TPR_Slam
TPR_7
TPR_MalT
ARM_TT21_4th
PknG_TPR
TPR_21
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
139105833
NCBI-ProteinID:
XP_070518233
LinkDB
All DBs
Position
LG09:4472936..4479019
Genome browser
AA seq
1305 aa
AA seq
DB search
MAGSIEIPLRDTDEVIELYLDQLPDGDEVLGILRQEHAQLTIWVNLALEYYKQQKIDDFI
KILESSRIDANIDYRDYEKDQMRALDMLAAYYVQEANKEKNKDKKRDLFTKATLLYTTAD
KIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSQNNIPSLLGKACIAFNKKDYRG
ALAFYKKALRTNPNCPAAVRLGMGHCFMKLNNQEKARLAFERALHLDGQCVGALVGLSVL
KLNQQEPESIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYNKVQHLALHAFHNTEN
EAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPHFGLGQMYVYRGDAENAA
QCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIELAQI
LEQSDLTAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEARKNLEESLARS
KADALHDSVYYNSISVTTTYNLARLNEALCVFDRAEKLYKDILKEHPNYVDCYLRLGCMA
RDKGQIYEASDWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTDA
YSLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKG
CVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQ
YLGRAYFKAGKLKEAKLTLLKARRVAPQDTVLLYNIALVLQRLATQILKDEKSTLTTVLQ
AVHELGLSHKYFQYLSAHGDRMEQLAESEARRCQDLLSQAQYHVARARRLDEEEKMLRRK
QEEERQAFKMRQTEEQRKLEEMRRQKEEEMLQKRQEYVEKTKNALVFGEMPVEKPGRKGK
RPRTDQYISDSGGSERDEGREEVPKERKRKRKPSGETKERKSRGRGRRRKDGSGNSGSDS
DQPKRKRGKKIAGTRKEKSRKGTVETLKGKLVKSKETISTSESDSDTGGLKIASGGESGN
ENQPHSSRRIVSDSEASRASRSRSRSRSKSGSRSKSSSRSRSRSHSRSRSRSRSRSRSRS
HSRSRSRSRSRSRSRSASRSRSPSRSRSRSRSRSRSRSRSVSKSRSRSVSRSRSRSASGS
RSGSAKSRSRSRSGSRKSGSRSRSNSGSRRSGSKPRSRSRSSSRKSGSRSKSRSRSRSRS
KSKSKSKSKSRSPDGSKKGASRSRSRSKSGSRSGSEERRSRSKSRSRSKSKSVSRSKSRS
KSGSRSRSRSRSKSGSRSRSPSGSARSASPVSRKSVSGSGGSDSE
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttccatagagataccgcttcgtgatacagacgaggttatagaactttattta
gatcaactgccagatggagatgaagtcctgggaattttgcggcaggaacatgcacaactt
actatctgggtcaatttggctcttgaatattataaacagcaaaagattgatgattttatt
aaaatacttgaatcttctcgtattgatgcaaatattgattaccgtgattatgaaaaagat
caaatgcgtgcacttgatatgttggctgcctactatgttcaggaagccaataaagaaaaa
aataaagataaaaaaagagatctctttacaaaagctactttgttatatacaacagctgac
aagattatcatgtatgatcagaatcatttgctcggtcgggcttatttctgtctgcttgaa
ggtgacaaaatggagcaggctgacgcacaatttaattttgttttaaatcaatcacaaaat
aatattccttctttacttggcaaagcttgcatcgcttttaataagaaagattacagaggt
gctcttgcattttataaaaaagcccttagaactaatccaaattgtccagctgcagtcaga
ctaggaatgggacattgttttatgaaattaaataatcaagagaaagcacgacttgcattt
gagagagctttacatttggatgggcaatgtgttggggcactagttggcctctcagtcttg
aaactgaatcaacaagaacccgaaagcataagaaccggcgtacaaatgttatcgaaagcg
tatacgatagattcaacaaatccgatggtgctgaatcatttagcaaatcatttctttttc
aaaaaggattataataaggttcaacatttagcactgcatgcatttcataatacggaaaac
gaagccatgcgagcagaaagttgctatcaattagcaagagcatttcatgttcaaggcgat
tacgatcaagcgtttcaatattactatcaggcaacacagtttgctccgcccgtatttgta
ctgccgcattttggtttaggacaaatgtacgtttatcgcggagatgcagaaaatgcagcc
caatgcttcgaaaaagttttaaaagcacaacctggaaattacgaaactatgaagattctt
ggttcgctctacgctaactcaagctctcaatcgaaacgcgatattgcaaaaaatcatttg
cgaaaagtaacggaacaatttcccgatgacgttgaagcttggatcgagttagcacagata
ttggagcaaagtgatttaaccgcagctttgaatgcttatggaaccgcaactaggatttta
aaagaaaaagttcaagcagacataccgccagaaattttaaataacgtaggagcattgcat
tacaggctcggtaacttggaagaagccagaaaaaatttagaagaatctctagcgcgttca
aaagcggacgccctacatgattcggtttattataattcgatatcagtgaccacgacgtat
aatttagcgcgccttaatgaggcgttgtgtgtatttgatcgagcagagaaactatacaaa
gatattttgaaagaacatccgaattacgtcgattgttatttgagactcggttgtatggcc
agagataaaggacagatatacgaggcgtccgattggttcaaagacgccttgagaatcaat
aacgaacatccggacgcgtggtcactgttgggtaatttgcatttggccaagatggaatgg
ggccctggccagaagaaattcgagagaattttgaaaaacccaacaacaagcactgacgct
tactctttaattgcgttaggaaacatttggttgcaaactttgcaccaaagtggaaaagat
aaggaaagggagaagcggcatcaggatcgagcgttagccatgtataaacaggttttaaga
aacgacccgaagaatatttgggctgcgaatggtattggcgcagtacttgcgcataaaggt
tgcgtaaatgaagctagagacatatttgctcaggtacgcgaagcaacagcagaattctgt
gatgtctggctgaacattgcgcatatatacgtggagcagaagcaattcgtcagtgccatt
caaatgtatgaaaactgtctacgcaaattctataaatatcatcatgttgaagtcttgcaa
tatcttggaagagcttattttaaagctggcaagctgaaggaagcgaaattgacgctatta
aaagcacgccgtgtagctccacaagatacagttttattgtataatattgctctcgtgctc
caacgtctggccacgcaaattcttaaagatgaaaaatcaactctaactactgtactacag
gcagttcacgaattgggcctttcacacaaatattttcagtatttgtcagcgcatggcgac
cggatggaacaattggctgaaagtgaagcccggaggtgtcaagatttgttatcccaagca
cagtatcatgttgctagagcgagaagattggacgaggaagaaaagatgttgagacgaaag
caagaagaagaaaggcaagctttcaaaatgcgtcagacggaagaacaacgtaagctggaa
gagatgcgtcgtcagaaagaagaagagatgttgcaaaaacgacaagaatacgtcgaaaag
actaaaaacgcgctggtatttggtgaaatgcctgtagagaaacccggacgaaaaggtaag
agacctcgaactgatcaatatatcagtgatagtggaggatctgaaagagacgaaggcaga
gaagaagtgccaaaagaaagaaagcgtaagaggaagccaagtggtgaaactaaagagaga
aagagcagaggtagaggcaggcgcaggaaggatggaagtggcaatagtggatcggacagt
gatcaaccgaaacgtaagcgtggtaaaaaaattgcgggtactaggaaagaaaaatcgcgt
aagggcacggttgaaacccttaagggtaaattggttaaatcgaaggaaactatttcaacg
agtgagtcagatagcgatacgggtggccttaaaatcgctagcggaggcgaaagtggaaac
gagaatcaaccacatagcagcagacgaatcgtgtctgattctgaagcttctcgtgcctca
cgctcgagatctcgatcaagatcaaaatctgggagtcgttcaaaaagtagttcgcgttcg
cgttcgcgttcgcattcgcgttcacgttcgcgttcgcgttcgcgttcacgttcacgttcg
cattcgcgttcgcgttcgcgttcgcgttcgcgttcgcgttcgcgttctgcttcccgttca
cgatctccatctcgttcacggtcacggtcacgctcacgctcacgctctcgatcgcgatct
gtttctaaatccagatccaggagcgtttcaagatcaagaagtcgttcggcatctgggtca
agatcagggtcagccaaaagtagatcaagatcacggtcaggttcacgcaaaagtggctca
cgatcaaggtctaacagtgggtcacgaagaagtggatcaaaaccaagatcaagatcaagg
tcgagttcaagaaagagtggttctagatcgaaatcgagatcgaggtcgaggtcgaggtca
aagtcaaaatcaaagtcaaagtcgaagtcgagatcaccggatggttcaaagaaaggcgca
tcgcgatcaaggtcccgatctaaaagtggttcgcgttcaggttcggaagaacgtcgatcg
cgaagcaaaagtcgctcacgatctaaatcaaaatctgtctcgagatctaagtcaagatcc
aaaagcggtagcagatcacgatctcgctctaggtcgaagagcggttctcgaagtcgtagc
cccagtggctcagcacgttccgcatccccggtatctagaaaatcagtgtcaggaagtgga
ggtagcgatagcgaataa
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