Cardiocondyla obscurior: 139105834
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Entry
139105834 CDS
T10704
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobs03021
]
139105834
Transcription machinery [BR:
cobs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
139105834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_8
TPR_16
TPR_12
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_10
TPR_6
TPR_Slam
TPR_7
TPR_MalT
ARM_TT21_4th
PknG_TPR
ANAPC3
TPR_BSK1_C
Motif
Other DBs
NCBI-GeneID:
139105834
NCBI-ProteinID:
XP_070518234
LinkDB
All DBs
Position
LG09:4466606..4471624
Genome browser
AA seq
1079 aa
AA seq
DB search
MAGSIEIPLRDTDEVIELYLDQLPEGDEVLGILRQEHAQLNIWVNLALEYYKQQKIDDFI
KILESSRIDANIDYRDYEKDQMRALDMLAAYYVQKANKEKNKDKKRDLFTKASLLYTTAD
KIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSQNNIPSLLGKACIAFNKKDYRG
ALAFYKKALRTNLKCPAAVRLGMGHCYMKLNNQEKARLAFERALHLDGQCVGALVGLSVL
KLNQQELESIRTGVQMLSEAYTIDSTNPMELNHLSNHFFFKKDYNKVQHLALRAFHNTEN
EAMRAESCYQLARAFHVQGDYDQAFQYYYQATQFAPPVFVLPHFGLGQMYVYRGDAENAA
QCFEKVLKAQPGNYETMKILGSLYANSSSQSKRDIAKNHLRKVTEQFPDDVEAWIELAQI
LEQSDLTAALNAYGTATRILKEKVQADIPPEILNNVGALHYRLGNLEEARKNLEESLARS
KAGALHDSVYYNSISVTTTYNLARLNEALCVFDRAEKLYKDILKEHPNYVDCYLRLGCMA
RDKGQIYEASDWFKDALRINNEHPDAWSLLGNLHLAKMEWGPGQKKFERILKNPTTSTNA
YSLIALGNIWLQTLHQSGKDKEREKRHQDRALAMYKQVLRNDPKNIWAANGIGAVLAHKG
CVNEARDIFAQVREATAEFCDVWLNIAHIYVEQKQFVSAIQMYENCLRKFYKYHHVEVLQ
YLGRAYFKAGKLKEAKLTLLKARRVAPQDTVLLYNIALVLQRLATHILKDEKSTLTTVLQ
AVHELGLSHKYFQYLSAHGDRMEQLAESEARRCQDLLSQAQYHVARARRLDEEEKMLRRK
QEEERQAFKMRQTEEQRKLEEMRRQKEEEMLQKRQEYIEKTKNALVFGEMPVEKPGRKNK
RPRTDQYISDSGGSERDEGREEVPKERKRKRKPSGETKERKSRGRGRRRKDGSGNSGSDS
DQPKRKRGKKIAGTRKEKSRKGTVETLKGKLVKSKETISTSESDSDTGGLKIASGGESGN
ENQPHSSRRIVSDSEASRASRSRSRSRSKSGSRSKSSSRSRSRSRSHSRSRSRSRSRIR
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttccatagagataccgcttcgtgatacagacgaggttatagaactttattta
gatcaactgccagaaggagatgaagtcctgggaattttgcggcaggaacatgcacaactt
aacatctgggtcaatttggctcttgaatattataaacagcaaaagattgatgattttatt
aaaatacttgaatcttctcgtattgatgcaaatattgattaccgtgattatgaaaaagat
caaatgcgtgcacttgatatgttggctgcctactatgttcagaaagcaaataaagaaaaa
aataaagataaaaaaagagatctctttacaaaagcttctttgttatatacaacagctgac
aagattatcatgtatgatcagaatcatttgctcggtcgggcttatttctgtctgcttgaa
ggtgacaaaatggagcaggctgatgcacaatttaattttgttttaaatcaatcacaaaat
aatattccttctttacttggcaaagcttgcatcgcttttaataagaaagattacagagga
gctcttgcattttataagaaagcccttagaaccaatctaaaatgtccagctgcagtcaga
ctaggaatgggacattgttatatgaaattaaataatcaagagaaagcacgacttgcattt
gagagagctttacatttggatgggcaatgtgttggggcactagttggcctctcagtcttg
aaactgaatcaacaagaactcgaaagcataagaaccggcgtacaaatgttatcggaagcg
tatacgatagattcaacaaatccgatggagctgaatcatttatcaaatcatttctttttc
aaaaaggattataataaggttcaacatttagcactgcgtgcatttcataatacggaaaac
gaagccatgcgagcagaaagttgctatcaactagcaagagcatttcatgttcaaggtgat
tacgatcaagcgtttcaatattactatcaggcaacacagtttgctccgcccgtatttgta
ctgccgcattttggtttaggacaaatgtacgtttatcgcggtgatgcagaaaatgcagcc
caatgcttcgaaaaagttttaaaagcacaacctggaaattacgaaactatgaagattctt
ggttcgctctacgctaactcaagctctcaatcgaaacgcgatattgcaaaaaatcatttg
cgaaaagtaacggaacaatttcccgatgacgttgaagcttggatcgagttagcacagata
ttggagcaaagtgatttaaccgcagctttgaatgcttatggaaccgcaactaggatttta
aaagaaaaagttcaagcagacataccgccagaaattttaaataacgtaggagcattgcat
tacaggctcggtaacttggaagaagccagaaaaaatttagaagaatctctagcgcgttca
aaagcgggcgccttacatgattcggtttattataattcgatatcagtgaccacgacgtat
aatttagcgcggctcaatgaggcgttgtgtgtatttgatcgagcagagaaactttacaaa
gatattttgaaagaacatccgaattacgtcgattgttatttgagactcggttgtatggcc
agagataaaggacagatatacgaggcgtccgattggttcaaagacgccttgagaatcaat
aacgaacatccggatgcgtggtcactgttgggtaatttgcatttggccaagatggaatgg
ggccctggccagaagaaattcgagagaattttgaaaaacccaacaacaagcactaacgct
tactccttaattgcgttaggaaacatttggttgcaaactttgcaccaaagtggaaaagac
aaggaaagggagaagcggcatcaggatcgagcgttagccatgtataaacaggttttaaga
aacgacccgaagaatatttgggctgcgaatggtattggcgcagtacttgcgcataaaggt
tgcgtaaatgaagctagagacatatttgctcaggtacgcgaagcaacagcagaattctgt
gatgtctggctgaacattgcgcatatatacgtggagcagaagcaattcgtcagtgccatt
caaatgtatgaaaactgtctacgcaaattctataaatatcatcatgttgaagtcttgcaa
tatcttggaagagcttattttaaagctggcaagctgaaggaagcgaaattgacgctatta
aaagcacgccgtgtagctccacaagatacagttttattgtataatattgctctcgtgctc
caacgtctggccacgcatattcttaaagatgaaaaatcaactctaactactgtactacag
gcagttcacgaattgggcctttcacacaaatattttcagtatttgtcagcgcatggcgac
cggatggaacaattggctgaaagtgaagcccggaggtgtcaagatttgttatcccaagca
cagtatcatgttgctagagcgagaagattggacgaggaagaaaagatgttgagacgaaag
caagaagaagaaaggcaagctttcaaaatgcgtcagacggaagaacaacgtaagctggaa
gagatgcgtcgtcagaaagaagaagagatgttgcaaaaacgacaagaatacatcgaaaag
actaaaaacgcgcttgtatttggtgaaatgcctgtagagaaacccggacgaaaaaataag
agacctcgaactgatcaatatatcagtgatagtggaggatctgaaagagacgaaggcaga
gaagaagtgccaaaagaaagaaagcgtaagaggaagccaagtggtgaaactaaagagaga
aagagcagaggtagaggcaggcgcaggaaggatggaagtggcaatagtggatcggacagt
gatcaaccgaaacgtaagcgtggtaaaaaaattgcgggtactaggaaagaaaaatcgcgt
aagggcacggttgaaacccttaagggtaaattggttaaatcgaaggaaactatttcaacg
agtgagtcagatagcgatacgggtggccttaaaatcgctagcggaggcgaaagtggaaac
gagaatcaaccacatagcagcagacgaatcgtgtctgattctgaagcttctcgtgcctca
cgctcgagatctcgatcaagatcaaaatctgggagtcgttcaaaaagtagttcgcgttcg
cgttcacgttcacgttcgcattcgcgttcgcgttcgcgttcgcgttcgcgaatacgataa
DBGET
integrated database retrieval system
