Cardiocondyla obscurior: 139106079
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Entry
139106079 CDS
T10704
Symbol
Srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03013
Nucleocytoplasmic transport
cobs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139106079 (Srrm1)
03015 mRNA surveillance pathway
139106079 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cobs03019
]
139106079 (Srrm1)
03041 Spliceosome [BR:
cobs03041
]
139106079 (Srrm1)
Messenger RNA biogenesis [BR:
cobs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139106079 (Srrm1)
Spliceosome [BR:
cobs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
139106079 (Srrm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
139106079
NCBI-ProteinID:
XP_070518673
LinkDB
All DBs
AA seq
1200 aa
AA seq
DB search
MMYTGTTASQDTRFSDKEKKLLKQMKFGDSLTQKVDMSKVKLDVIKPWITTKITQILGME
DDVVVEFVYNQLEEKFPDPRKMQINLTGFLNGRNARSFMGELWDLLVSAQESVTGIPEAF
LQQKKDQIKKRLEEQEKLQASLAEKEKEKEREKEKDDADSKIKKEEKDRGSSKERRRDRS
RDRDRDRSKRSRSRDRHRDRDRSSRKRRSVSRSPSKNSKDNGKDMPEPKIEREDSPQPEN
AIPLMPVKTKPEAAVAISRLQAKLMSIADGKKKNNRTPSPESLEKSTRKSRSTSKSPTIR
SKKSRTKSPSRDSKTRRSRSPASKSRRSRSKSRSRRSRSKSRRSKSRSQDRTKSKRSKSK
SPRSRSQSRSKKSRSKSEDRSKSRKSRSDSSDSRSSKSRSKSPEKQKDNGDNRKRNNSTS
SSSDSEEEKNAKDKNDFEIRKKKDGVQAKRSYRKTNKDDSGSDSDSSRDRKSAPKRRSPS
PRKDRGRSKDRDRNRSRDRSQDRSRDRSRDRSRDRNRRRSLDRDRDRRRERERERERERE
RLDRYSGSRSMRPPSVRRPPNRRSPPRRSPARYRRRSPSPDDRRRRRSLDRRRRSSERRD
RRRSPDRRGSRRSPDGRDRSSRYDRSSSRDRSSRRDRSRDRRDKDRRSRSKDRRSRSKDQ
RSSVDRSRDGKRSPDRSKGTKDKAKDRKVDEKTKRPPDTGSRKELRNGRSKSSSSESSES
SSSSNEDELLRKSVERKASQEKREKEREHADDAKKKEKEKIAKEELKRPEKEVKKTEPVI
AKKPETSVSPKKLQTISLPVTRHRFSKSLSRTPSPFKKTEDIVAVAAKIKQTKEDTKDES
PLKVEDVNFIPGDTFPLKKDDKFLKSTKLVIEDKKSTQKQLEPLSKKPIEVTKKTKREKR
DDSTDSEDSDGEGKKKARKIEKSKKSKKTSTDEDKSDKSKAGSSSDSEDDRKHSDKNKKV
RDTSRTDSIDDRNKDRKDSRKREVVENDSRKRSRKEIEEELKKSKRSRRDSSSGEEEQKS
KRGRNEDDRSRSRKSKKDSSSDEEPKKVKKRRETSSDDEKSRSRKSRKDSTSEDESKAKS
KKSKRDSSSEEDDLGDKDLKKKRKVDDSSDDEKVKKKRKKKAKTSTSESEESEVEEKKKK
KEKKHKKHKKHKKHRKHKKKKVADSDESDVSEGNTEELEKKLREKALKSMKKGHSIERSD
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacacagggacaactgcttcgcaggacaccaggttcagcgacaaagagaagaag
cttttaaagcaaatgaaatttggagattcattgacacaaaaagtggatatgagtaaagta
aaacttgatgtgattaagccatggattacaacaaagatcacacagattttgggaatggaa
gacgacgtggtggtagagtttgtgtataatcagcttgaggagaagtttcctgacccccga
aaaatgcagatcaacctgacaggcttcctgaacggtaggaatgcccgttctttcatgggt
gaattatgggaccttttggtctctgctcaagaaagtgttacgggcattcccgaagcattc
ttacaacaaaaaaaagatcaaattaaaaaacgtttggaagaacaagaaaaacttcaagca
tcgctggcagaaaaagagaaagaaaaggagcgtgaaaaggaaaaggatgacgctgacagt
aaaataaaaaaggaagaaaaagatagaggctcatcaaaagaacgtagaagagatcgaagt
agagatcgtgatagagacaggagcaaaagaagccgatcccgtgatcgacacagagatcgt
gatcgatcaagtcgtaaaagaagatctgtttcaagatcgcccagtaaaaattcgaaggat
aacggaaaagatatgcctgaacctaagatcgaacgagaagattcgccacaaccagaaaat
gctatacctttgatgcctgttaaaaccaaaccagaagctgcagtagcaatatcaagattg
caagccaagttgatgagtattgctgatggaaaaaagaagaataatcgtacaccctcgcca
gaatcgttggagaaatcaacaaggaaatcacgatctacatctaaatcaccgacaattcgt
tcgaagaaatctagaacaaagtcaccaagtcgagattctaaaacacgtcgatcacgatcg
cctgcttcgaaatcgagacgatctcgttctaaatcgagatctaggagatctcgatctaaa
tctagaagatctaagtcgcgctctcaggatcgtactaaatccaagcggagcaaatctaaa
tcaccgagatcacgctcacaatcgcgatctaaaaaatctagatccaagagtgaagacaga
agtaagtcaagaaaatcgagatctgattcaagtgattcgagatcgtccaaatcgcgttcg
aaatctccggagaaacaaaaagacaatggagataatagaaaacgcaataatagtacgagc
agtagttctgattccgaagaagagaaaaatgcgaaagataaaaacgactttgagatacga
aagaagaaggatggtgtgcaggctaagagatcttataggaaaaccaataaagacgatagt
ggtagtgatagcgactctagtcgagacagaaaatcagctcctaaacgaagaagtccttcg
ccacgtaaggacagaggtcgatctaaagatagagacagaaacagatcacgagacagatcg
caagatagatcacgagatagatcgcgtgatagatcacgcgatagaaaccgaagaagatca
ttggaccgggatcgcgataggaggagagaacgggaacgcgaaagggagagggagagagaa
agattggaccgatacagcggtagccgcagcatgcgaccaccttcagtgcgtagaccacct
aataggcgcagtcccccacgtagaagtccggcgagatatcgtcgtagatcaccgagccct
gacgatagacgtcgtaggagatcgctggatcgtcgaaggcggtcgtcggaaagacgtgat
aggcgtcgttcgccagatcgacgtggaagtcggcgttcaccagatggacgggatcgatcg
agcaggtacgatagatcttcctcacgcgacagatcaagtagacgagatcgctccagagat
cggcgggataaagatcgtagatctagatctaaagatcgtagatcgagatccaaggatcaa
aggtcatcggtggatcgttcgagagatggaaagcgatctcccgatcgttcaaagggtacc
aaggataaggcaaaggacaggaaagtggatgagaaaactaaaagaccacctgatacagga
tcgcgaaaagaattgcgaaatggccggtctaaatcgagtagctcggaaagtagcgagagt
agttcctctagcaatgaggatgagttacttagaaaatcagtcgagcgcaaagcatcgcag
gaaaaacgagaaaaggaacgtgaacatgcagatgatgccaagaagaaagaaaaggagaaa
attgcgaaagaggaacttaagcgaccggagaaggaagttaagaagacagaacccgtcatt
gcaaaaaagcctgaaaccagcgtttctcctaagaaacttcaaactatttcacttcctgtt
accagacatagattttcgaagagtttgtcgcgtacaccttcgccatttaagaagaccgag
gacatcgttgcagtagccgccaaaattaaacagacgaaagaagacactaaagatgaatca
ccactgaaagttgaagatgtcaattttattcctggagatacttttcctttaaaaaaggat
gataagtttttgaaatcaacaaaattagtaatagaagataaaaaatctactcaaaaacag
ttggaaccactatctaaaaaacctatagaagtgactaaaaagacaaagagagaaaagcgt
gatgattctacagatagcgaagatagtgatggtgaaggtaagaaaaaagcaagaaaaata
gaaaaatcgaagaaatctaaaaaaacttctaccgatgaagataaatctgataagagcaaa
gctggatcaagttcagattctgaagatgacagaaagcattcagataaaaataaaaaagtt
agagatactagtcgaaccgattcaattgatgatcgtaataaagataggaaggatagtaga
aaacgtgaagttgttgaaaacgattcacgaaaacgttcaagaaaagaaatagaagaagaa
ttgaaaaaatcaaagagatcacgaagggactcatcttctggtgaagaagagcaaaaatct
aaaagaggtagaaatgaagatgatcgatcaagatctcggaaatcaaagaaagattctagt
tctgacgaggaaccaaaaaaagtgaaaaagagaagggagacttcatcggacgatgaaaaa
tctagatcacgaaagtccagaaaagattcgacaagtgaagatgaatctaaagcgaagtca
aaaaaatctaaacgcgattctagctcagaagaagacgatcttggagataaagatttaaaa
aagaaaagaaaagttgatgatagctcggacgatgaaaaagtaaagaagaaacgtaaaaaa
aaggcgaaaactagtactagtgaatcggaggaaagtgaagttgaagagaagaagaaaaag
aaagaaaaaaagcacaagaaacacaagaaacataagaagcacaggaagcacaagaaaaag
aaggtcgcggattcagacgaatctgatgtaagtgaaggtaatacggaagaattggaaaaa
aaacttcgagaaaaggcattaaagtctatgaaaaaaggacatagcattgaacgaagtgat
tga
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integrated database retrieval system
