KEGG   Cardiocondyla obscurior: 139106219
Entry
139106219         CDS       T10704                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
  KO
K03006  DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Organism
cobs  Cardiocondyla obscurior
Pathway
cobs03020  RNA polymerase
cobs03420  Nucleotide excision repair
Brite
Enzymes [BR:cobs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     139106219
Transcription machinery [BR:cobs03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     139106219
DNA repair and recombination proteins [BR:cobs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      139106219
SSDB
Other DBs
NCBI-GeneID: 139106219
NCBI-ProteinID: XP_070518887
LinkDB
Position
LG10:complement(3961393..3968896)
AA seq 1906 aa
MTMSDSKAPLRTVKRVQFGILSPDEIRRMSVTDGGIRFPETMEGGRPKLGGLMDPRQGVI
DRNSRCQTCAGNMTECPGHFGHIDLAKPVFHVGFITKTIKILRCVCFYCSKLLVNPHNPK
IKEIVVKTKGQPRKRLAFVYDLCKSKNICEGGDEMDINKENIESQPQMDRKPGHGGCGRY
QPNLRRSGLDVTAEWKHVNEDSQEKKIILSAERAWEILKHIKDEESFILGMDPKFARPDW
MIVTVLPVPPLSVRPAVIMYGSAKNQDDLTHKLADIIKSNNELLRNEQSGAAAHVISENI
KMLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVI
TPDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQVLVRRGNSQYPGAKYIVRDNGERI
DLRFHPKSSDLHLQCGYRVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLS
CTSPYNADFDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRK
MTKRDVFIEKEQMMNLLMFLPSWDGKMPQPCILKPKPLWTGKQLFSLIIPGNVNMIRTHS
THPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCGR
FYGNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEP
TPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIAC
VGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGL
IDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLP
TIKVSNKAFEKKFKFDPTNERYLRRIFNEDIVREMMGSGEVISELEKEWEQLNRDRTVLR
TIFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPMRVIQGVKNLLEKCIIVAGDD
RLSKQANENATLLFQCLVRSTLCTKCVSEEFRLSSEAFEWLIGEIETRFQQAQVSPGEMV
GALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAA
ARDAEKAKNVLCRLEHTTLKKVTANTAIYYDPDPQNTVISEDQEFVNVYYEMPDFDPTKI
SPWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDN
KFQDTDEDSVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIIITETG
EFKAIAEWLLETDGTSLMKVLSERDVDPIRTFSNDICEIFQVLGIEAVRKSVEKEMNAVL
QFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHA
EVDPMRGVSENIIMGQLPRIGTGCFDLLLDSEKSKSGIEIPMAVGAGMMGTAGMFFGSVT
GMSSMSPQMTPWMGATPGYGASSMSPALSSGMTPGGACFSPSGASDASGLSPAYSAYSPQ
PGSPGSPGPSMSPFPMSPAGAASPSYSPTSPAYLPTSPSMTPSSPNYSPTSPTYSPTSPN
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNY
TPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPAS
PTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKY
SPTSPTYTPTSPNYSPTSPTYSPPVPGYSPTSPTYSPASPAYETDD
NT seq 5721 nt   +upstreamnt  +downstreamnt
atgacgatgtccgactctaaggcgcctttgaggacggtgaaacgcgttcaatttggtatt
ctctcaccagacgagattcgtcgtatgtctgtcactgatggcggcatacgatttcccgaa
actatggaaggtggccgtcctaaattgggcggcctcatggatccaaggcaaggtgttatt
gataggaattccagatgtcaaacttgtgctggaaatatgacagaatgccctggccatttc
ggtcatatagatctagcaaaaccagtatttcacgtgggatttattacaaaaactattaaa
attttgagatgtgtctgcttttattgctcgaaattacttgtcaatcctcataatccaaag
attaaagaaattgtcgtaaaaacaaagggacaaccacgaaagcgacttgcatttgtttat
gatctttgtaaaagcaaaaacatttgcgaaggtggagacgaaatggatattaataaagaa
aatatagagagtcaaccacaaatggatagaaaacctggtcatggtggttgtggtagatat
caacctaatcttagacgatcaggcttggatgtcacagctgagtggaagcatgtgaacgaa
gactcgcaagagaagaaaataattctttcggccgagagagcttgggaaattttaaagcat
attaaggacgaggaatctttcattttgggtatggacccgaaatttgctcggccagattgg
atgatagttaccgtgttgccagtgccaccattgtcagtcagacctgcggtcattatgtat
ggttctgccaagaatcaagatgatttgacgcacaaattggcggacattattaaatctaac
aacgagttactacgaaacgaacagtctggcgcagcggcacatgtaatctcggaaaatata
aagatgttacaatttcacgtggcaacactcgtcgataacgacatgcccggtatgcctaga
gcgatgcaaaagtcaggtaaaccgctcaaagcgatcaaggcccgattgaagggaaaggaa
ggcagaattcgcggaaacttgatgggaaagcgcgtggatttttctgcccgtactgttatc
actccggatcctaatctacgtattgatcaagtaggcgtaccgcgtagtatagctcaaaat
ttgacatttcctgaaattgtaaccccctttaatattgacaaaatgcaagtgctagtcagg
cgtggtaattcacaatatcctggcgcaaaatacatagttcgtgataatggcgaaagaatt
gatttacgctttcatcccaagtcctcagatctgcatttgcagtgcggctaccgtgtagaa
agacatatccgcgacggcgatcttgtgatctttaatcgccaacccactcttcataaaatg
agtatgatgggtcatcgcgttaaagtacttccatggagcacatttcgtatgaatttaagc
tgcacatcgccttacaatgctgattttgacggcgatgaaatgaatttgcacgtgccgcaa
tcaatggaaactcgcgcagaggtcgaaaatattcatgtgactccacgacaaattattact
ccacaggcgaacaagccagttatgggtattgtacaggacactttgactgctgtgagaaaa
atgactaagcgcgacgtatttatcgagaaggaacaaatgatgaatctattaatgtttcta
cccagctgggacggcaagatgccacaaccatgtattctgaaaccgaaaccgttgtggacc
ggcaaacagttattttctcttatcataccgggcaacgtaaatatgatacggacacatagc
acgcatcctgacgaggaagacgacggtccatataagtggatttcaccgggtgacactaaa
gtcatggtagaacatggagaactcgtaatgggtattctctgcaagaaaaccttaggtact
tcagctggttctttgcttcatatctgtatgcttgaactgggccacgaagtatgtggacgt
ttttacggcaatattcaaactgtcattaataattggttactactggaaggccattcgatt
ggtattggtgacactattgccgatccacagacatatttggaaatccagaaggcgattaaa
aaggctaaagaggatgtgatagaggtaattcaaaaggctcacaatatggaactcgaacct
acgcctggcaacacgcttcgtcaaactttcgagaatcaagtgaacagaatattgaacgat
gccagagataaaaccggaggatccgccaaaaagtcattgacagaatataataatttgaaa
gctatggtagtatcgggctcaaaaggctccaacattaacatttctcaggtcattgcttgc
gtagggcaacaaaacgtggaaggtaaacgaatacccttcggttttcgtaagagaacgcta
ccgcatttcatcaaggacgactatggaccggagtcccgtggatttgttgaaaattcatat
ttagctggtcttacgccgtcagaattttatttccacgcaatgggtggtcgtgaaggtctt
atcgatactgctgtaaagacggccgaaaccgggtatattcagcgtcgtttgataaaggct
atggaatcagtcatggtgcattatgatggcaccgtacgtaattccgtcggtcaactaatt
cagttgcgttacggagaagacggtctttgcggagagactgtcgagtttcagaatttacca
acgattaaagtgagtaacaaggcctttgagaagaaattcaaatttgatccgactaacgag
cgatacttgcgacgtatatttaatgaagacattgttcgagagatgatgggatctggagaa
gtaatatccgaactggaaaaagagtgggagcaattaaatagagatcgcactgtactccga
acaattttcccgagtggtgaatctaaggtcgtgctaccctgtaatctacaaagaatgatt
tggaatgtgcaaaagatattccacattaataagcgagcgccaactgatctcagtcctatg
agggtaattcaaggcgtgaaaaatcttttggaaaaatgcattatcgtcgctggagacgat
agattgagcaaacaggcgaacgaaaatgcaacattattatttcaatgtttagtaagatcg
actttatgtaccaaatgcgtctctgaggaatttagattatcaagtgaagcttttgaatgg
ctgattggagaaatcgaaacgagatttcagcaggctcaagtatcacctggcgagatggtc
ggcgcattggcggcacaatctcttggcgaacctgccactcagatgaccctgaacacattc
catttcgctggtgtatcgtcgaagaatgtaacccttggggtacccagattgaaggaaatt
attaatatcagtaaaaaaccaaaggcgccgtcgctcacggtgttcttaacaggcgccgct
gcgcgtgacgctgaaaaagcgaagaatgtgctctgtcgactggagcacacaacgttgaaa
aaagtaacagcaaacacggctatatactacgatccagatccacagaataccgtaatctcg
gaagatcaagaattcgttaatgtttattacgagatgcctgactttgatcctacgaaaata
tcgccgtggcttttgcgaattgagctggacagaaaacgaatgactgacaaaaagttaacg
atggaacagattgctgagaaaatcaacgccggctttggtgacgatctaaactgtatattc
aatgacgataatgccgagaaattagtcctacgtattagaataatgaatagtgatgataac
aagttccaagacacggatgaagattctgtagataagatggaagacgatatgttccttcga
tgtatcgaagccaacatgcttagcgatatgactttacagggtattgaagctatcggcaaa
gtttacatgcatttaccgcaaactgattctaaaaaacgtattattatcacggaaaccggt
gaatttaaggccatcgcagaatggcttttggaaactgacgggacgagcttaatgaaggtg
ttgagcgaaagagacgtggatcccatacgcacatttagcaatgatatttgtgagatattc
caagtgctcggcatcgaagcagtgcgaaaatccgtagagaaagagatgaacgcagtattg
cagttctatggcctttatgtaaattatcgacatctcgctttactttgtgatgtcatgaca
gcgaaaggccatcttatggcaataacacggcacggaattaataggcaagatactggcgct
ttgatgaggtgttctttcgaagaaacggttgatgtattactggatgctgcatctcacgca
gaggtagatccaatgagaggagtatctgagaatattataatgggacaacttcctcgaatt
ggaacaggatgttttgatttgttactggattctgagaaatctaaatctggcatcgagatt
cctatggcggttggcgcaggtatgatgggaacggcaggaatgttcttcggtagcgtaact
ggcatgtctagcatgagtcctcaaatgactccttggatgggagctactcctggttacggc
gcatcgagtatgtcgccagcattgagtagtggtatgacgccgggtggcgcatgcttttca
ccgtcaggagcatcagatgcgtcaggtttatcaccagcatattcggcttattcgccgcaa
ccaggaagtcctggtagtccaggtccaagtatgagtccgtttccaatgtcaccagctggt
gcagcatcgccaagttactctccaacatctccggcgtatttgcctacgtcgcccagcatg
acaccttcaagtccaaattattcgcctacaagtccgacatattctccaactagtccaaat
tattcgccaacatcaccaagttattcaccgactagtccaagctattcgcctacttcgccg
agttattcgccgacgagtccgagttattcgcctacttcgccgagttattcgccgacgagt
ccgagttattcgcctacttcaccgagttattcaccaaccagcccaagttattcgcctaca
tcgccaagttactcgccaacttcaccgagttattcaccaacgagtcccagttattcgcct
acttcgccgagttattcgccgacgagtccgagttattcgcctacttcgccgagttattcg
ccgacgagtccgagttattcaccgacttcacctagttattcaccgagctcgcctaattat
acacctgcttcaccttcatattcaccaacttcgcccagttattcgccaagctcgccgcag
tactcgcccgcgagtccaagttattcccccagcagtcctaaatattcaccgacaagtccg
agctactctcctacctcgccatcatttgctggtacgtcgccgcaatacacgcctgcgagt
cccacatactctccgacgagtccaacatattcgcctacaagtccatcgtactcaccgagt
tcgccacagcatactgcttctggcagcactcgatattcacctagcagcccgaactattcg
cctaccagtccaacatactctcctacaagtccacagtactcgccgtcgagcactaaatat
tcaccaacgagtcctacgtacacgcctacaagtccaaattattctccgacaagtccgaca
tattcgccacctgtaccgggatattcacctacaagccccacgtattcgccagcatcacct
gcttatgagacagatgattaa

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