Cardiocondyla obscurior: 139106421
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Entry
139106421 CDS
T10704
Symbol
Shn
Name
(RefSeq) uncharacterized protein Shn isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
cobs Cardiocondyla obscurior
Brite
Transcription factors [BR:
cobs03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139106421 (Shn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139106421
NCBI-ProteinID:
XP_070519279
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Position
LG11:complement(3432480..3545868)
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AA seq
2166 aa
AA seq
DB search
MTTETHTVAMTDPQLTNNNNNNNDGEPKYLHKKFKKMATTEVAPKVVEKESTTNNVASGE
APKRKDDDKDGKESSKELGNKLEPSPEPAGGVEPVAESRKGGYACPYCSMTWTKPSVLQK
HIRAHTNERPYPCALCGISFKTKSNLYKHCRSRSHVHKMEKGEKVSEDSDISLSDSASNG
TGTPPPPPASTPTTATTMVSTVAVKTVKTGKIYKPKFQARTALQCVNSDTEMSSLSPSSS
NSSSLSSSMTTSTSNSVKPNAEQLQEHIDKIITDNQAIVDAVDPCLHKLMHRQQSLVETK
QPFEQQPLNLSSVEESSNSSRKRCYSDSCTQEAKGSEISESSIIKDLLLKSRGSMNGSIP
EATVENFVCPTCNIPYTSIDNLEAHRRYYCKGIDSSRKGADYHADLEKRDSDFDVKSSDY
YNTLQPLPSPGPLLGNTRLVDAYAPPAKKQRTEPVPTSLRSLEELSKYPRPNSLQMFGGE
VRILDNTGEVTKTMRIEPRQTNSPTNEHVVNSKCMNSETASIVVKSGLHSGGTMMHKPPG
TSANTSNSSISLPNAPKILAPIIPNISTPNIAPTMSCYDYLESHLNPLTSITAYNPLTLP
QAAGITNILHGGKVIPYVPGMPGPHTLTGTPTIDISPSITAGEAGYKVIPGLPGLHMISQ
PLDLASPVKVQPSTVPGMPSPLSVSSMLEQPLDLASPAKESMKISFKTPNGDGLKSGLTS
PKVPTVKVETSTDKYRTRVPVPSTLTGGETGKADLDRHIKNSTTGKYKSMESPRERKDFT
YEKNSKPDKSFNYSNGVDPTISSNCYNKMRYSPKNISESRKRPSNWGVSEVDAGRVPSVD
AHSAMPKYDLPSHENGRLKSTVSSDTRGWLKATDGYGVLNGTKIKPDNTQSMILVNLDSS
KTEVPTKTSIELIVKDKQPETKSPKSSSDIAKETTSANKFLRPTSLPLKPGTFTPKKHHG
ITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQH
GLSMYSNWKICKEAPPDLDMAHYDSRHRPLNYTTAWKKQDDILTHSSQRPTTPTSPDSGL
ESDMQEKTKRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDV
RPYTCKHCTFSFKTKGNLTKHMKSKAHYKKCVELGVVPVPTTVCDENIDKEAIARLAAGG
GNTEESSEEEEESEGDDSEESGSEEQEAAQSLLSLSQRNTNRLPGLLPSGRPTTYPYTLT
LPTTSSVSIATTTTTTSTVTQSVTTQGTALIQNELSHRYYFPSNRSATEETRISVIQSSK
KDDSDFEIEEITDVAESRQQLSQPMDLTTKQTSQVLPSPVPQRVKPADILTPVSEPVLLQ
TIVQTMERLPIQGREWKPDAEGHMLQAYLTERHVMDSKIKQQYRVGNTKIDNKQMQERDL
YPRHQEQNRSRHIDSNGIPTVTYTDPSKMQHTVMESRVKYMTKHTSDDIKMEIREKIYQN
NMAMEKRTFDYEAIHKNKEQINRMISDRENFELALTNGPVSTRPSVDYSLSMTRNNNSIE
RPNCSIVPVRSTSNIDNHLPKSLNMDVNNRPTLMQHTNNDIDRNSIFNAMKMVNELERPR
DCHSLGQELRSMNHEMRTTTNDVRMQNHSPRNLDLRPPGQEYRTQSQEMRLPNQQEYKIR
GQEIRPPSREYKPFVHDMQVIQKLMPSTNMEIRQTNPDNKPPSRDMRALVEYRAHVQDPR
VSYEILQPIHESSKSQNLDARSTSPPDVRVVYYDTKHTAEMAKQQQNTLDNMKHAIAGKV
VVGGPDFRSSSPNTGTAKPQAEFLQPSSGPAPNYVSVTEDGRTACGICNKMFSKPSQLRL
HLNIHYFERPYRCENCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCKD
CAVAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLTSL
QMLAQKLENPKTTQWDSETVPGPVVSSSETSSDEGEPIPQHTLHAQYVKPTPDVDISRPY
HMSIVSEKSKAINDARLRSPQFNQQRRDYAVKEQRPISTIISTEDIRPEDNLQSYKCQVC
PVSMHTVNELQVHCFVEHNIETDTSTNIHGDRSAGKCSREKENTHKKKIEESTVKEDHKR
QRLEDT
NT seq
6501 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagagacccatactgtggcgatgacagacccacagctgaccaacaataataac
aacaacaacgatggcgaaccaaagtatttgcataagaagttcaagaagatggcaacgacc
gaagttgcaccgaaagtcgtcgagaaggagagcacgacgaataacgtcgcctctggcgag
gcgcctaaacgaaaggacgacgataaggatggcaaggagtcgtcgaaggaactcggtaat
aagcttgaaccctcgccggagccggcgggaggagtcgagcctgtcgccgagtccaggaaa
ggtggatacgcgtgtccttactgctcgatgacgtggaccaagccgagtgtcctccaaaag
cacatcagggcacatacgaatgaacggccgtatccgtgcgcactgtgcggaatctctttc
aagacgaaatcgaatctgtacaagcattgcagatcgcgctctcacgtacacaaaatggaa
aagggagaaaaggtatctgaggattctgatataagtctgtccgacagcgccagtaacggt
actgggacaccaccgccgccgccagcttcgacgcctacaacggcgaccacgatggtatct
actgtcgcagtaaaaaccgtgaaaaccggcaagatttacaagccaaagtttcaagctcga
acggctctgcaatgcgtgaacagtgacactgaaatgtcttccttatcacccagttcttcc
aacagttcctccttgtcttcctcaatgactacttctacttccaattctgttaaaccgaac
gcagaacagctgcaagagcacatcgacaagatcatcacggataatcaggcgatcgtcgac
gcagtggatccatgcttgcacaaactaatgcatcgccaacaaagcttggtggagacaaaa
cagccattcgaacagcagccattgaacttgtcttccgtagaagaatcttccaacagcagc
agaaagcgttgctacagtgacagttgcactcaggaagcaaaaggcagtgagatatcagaa
agctcgatcattaaagatcttctgttgaaatctcgcggttccatgaacggatcgataccg
gaagccaccgtggaaaacttcgtctgtcctacttgcaacatcccgtatactagcatagat
aatttagaggctcaccgtagatattattgtaaaggcatcgacagttctcgaaaaggagcc
gactatcatgccgacttagaaaaacgagattctgattttgatgtgaaatcttctgactat
tataataccttgcaaccgttaccttcgccggggccgcttctgggtaataccagattggtg
gacgcgtacgctccacctgctaaaaagcaaagaacggaacctgtgccaaccagcttaaga
tcattagaagaactcagcaaatatccgcgtccgaactcgttgcaaatgttcggcggtgaa
gttagaattctcgataacacaggcgaggtaacgaaaacaatgagaatcgagccacgacag
acgaattcgcccacgaatgagcatgtagtcaacagtaaatgcatgaactcagaaacggcg
tcgatagtggtaaaatcaggacttcattctggcggcactatgatgcataaaccgccaggc
acatcggctaacacgtccaattcctccatatctttgcccaatgcgccaaagatattggcg
cccatcataccaaacatatcaactccgaatatcgcgcctactatgtcctgttacgactac
ttggagtcgcatcttaacccgctgacgagtatcactgcctacaacccgttgactctgcct
caagcagccggtattacgaatattcttcatggcggaaaggtgataccttatgtacccggt
atgcccggaccgcacactctcaccggtacaccgactatagacatatctccgagcataaca
gccggcgaagccggttacaaggtgataccgggcctcccgggcttacatatgatatctcaa
ccgttggatttagccagtccggtgaaggtacagccgagcacagtgcctggcatgcctagt
ccgttatctgtttcctccatgctagaacagcctttagatttggccagtccggcaaaggaa
tcgatgaaaattagtttcaaaacgcccaacggcgacggtctgaaaagcggtttaaccagt
cccaaagttcctactgttaaagttgaaacttcgacggataagtatcgcacaagggtacca
gtaccgtcgactctcaccggtggagaaacgggcaaagcggatctcgatcgtcatatcaaa
aatagtacgactgggaagtacaagagtatggaaagcccgcgagagaggaaagatttcacg
tatgaaaaaaattcgaaaccggataaaagttttaattattcgaacggcgtggatcctacg
atttcttcaaattgttacaacaaaatgagatactcgcccaaaaatatttcggaaagcaga
aagagaccgtcaaattggggcgttagtgaagtggacgctggcagagtaccttcggtagac
gcacattctgcaatgcctaaatatgatttaccttctcacgaaaatggtcgattaaaaagt
actgtttcttcggatacacgtggatggttgaaagctacggacggatacggtgtgttaaac
ggcacaaaaattaagcccgataacacacagtcgatgatacttgtaaacttagattcttcc
aagacagaagtgccaacgaaaacttccatagaattaattgttaaggataaacaacccgag
accaaatcgccgaagagtagcagcgatatcgctaaagaaacaactagtgctaataaattt
ttgagacctacatctctgccgttaaaacccggtacgtttacgccgaagaagcatcacggg
atcacgcctacggcaaatacacttcctctcattagtccggaaactccacgacctaaaaag
tcgtacgggcaattatatttaaatgggcatgcctacacatatctgggactcaagtgttcc
accagggtgttttattgtactctaaatcgaccgcagccaatgtatgtcacgcaacagcac
ggtctatcgatgtactctaattggaaaatatgcaaggaggcaccaccagatttggatatg
gcacactacgattctcggcataggcctctcaattacacgaccgcgtggaaaaaacaagat
gacatcttaacgcattcctcgcaaagaccaaccactcctaccagcccggacagtggatta
gagagtgacatgcaggagaagacgaagcgagtaaaaatatttgacggaggatttgaaagc
aacgaggattatacttatgtgcgcgggagaggtcgaggacgttatgtctgcgaagaatgc
ggtattcgttgtaaaaaaccatctatgctgaagaaacatatcagaacacatacggatgtc
agaccatatacttgcaagcattgtacctttagttttaaaacaaagggtaatctcacgaaa
catatgaaatctaaagctcactacaaaaagtgtgtggaattgggcgtagtgccagtccct
acaactgtgtgcgatgaaaacattgacaaggaggctatcgcgcgattagccgccggtggc
ggtaacacggaagaatcttcggaagaagaagaagaaagtgaaggagatgacagcgaggaa
tctggcagtgaggagcaagaagcagcgcaaagtttactgagtctttcacaacgtaatacg
aacagattgccgggcttgctaccatctggcagacctacaacttatccgtacacgttaact
ttaccgacaacatcctccgttagcattgcgactaccactacgacgacatcgaccgtgact
caaagcgtcaccacgcaaggaacagctttaattcaaaacgaattgtcgcaccgttattac
tttccatcaaaccggagtgcaacggaagaaacgagaattagtgtcattcaatcgtcaaag
aaagatgattctgatttcgaaatcgaggaaatcactgacgtcgcggagtcacgtcaacag
ctgtcgcagcccatggatctcacgacgaagcagaccagtcaggtgttgccctcgccggtc
ccgcaaagggtaaaacccgcggacattcttacgcctgtatcggagccggtcctgttacag
acgatagtccaaacgatggaacggctacctatacagggtagagaatggaaaccggatgca
gagggccacatgttacaggcctacctcacggagagacatgtgatggacagcaaaattaag
cagcaatatcgcgtaggaaatacgaagatagacaataagcaaatgcaagaaagagatctt
tatcctcgccatcaggaacagaatagatctagacacattgattccaacggtattccaaca
gtaacttataccgatcccagtaaaatgcagcataccgttatggaatctagagttaaatac
atgacgaagcataccagtgacgatattaagatggaaattagagaaaagatttatcagaat
aatatggcaatggaaaaacgaacgttcgattacgaggctattcacaaaaataaagaacag
attaatcgtatgatttctgatcgtgaaaattttgagcttgctctaactaacggtcccgtt
agcacaagaccaagtgttgattacagtctatccatgaccaggaataataattcgatcgaa
agaccgaattgttctattgtacctgttcgtagcacgtctaatatcgataatcatttacca
aaatctttaaatatggacgttaataatcgaccaacgttgatgcaacacacaaataacgat
atcgatagaaattctatatttaatgcgatgaagatggtaaatgaattggagagacctaga
gattgccattctctaggccaggaattgagatctatgaatcacgagatgaggactacgact
aatgacgttcggatgcaaaatcacagtccgcggaatcttgatttaagaccgcccggtcaa
gagtacagaacgcagagtcaagagatgaggttaccgaatcagcaagagtataaaatacgc
ggtcaagagataagaccgcctagtcgcgagtataaaccgtttgttcatgatatgcaagta
attcagaaattgatgccatcgacaaacatggaaatccggcaaacaaatccagataataaa
cctccgagccgcgacatgagagctcttgtggaatacagagcacatgtgcaagatccacgt
gttagctatgaaatattacaaccaatacatgagtcttcaaagtcacaaaacttagacgcg
agaagtacatctccgccggacgtaagagtcgtgtattacgatacgaagcacaccgcggaa
atggctaaacagcagcaaaatacattagacaacatgaaacacgcgatagccggaaaggta
gtcgtcggtgggccagattttcgatcatcgtcaccaaacacaggaactgcgaaaccgcaa
gcggaattcttacaaccgtcgagtggaccggcgcctaattacgttagtgttacggaggac
ggcagaactgcatgtggaatttgtaacaagatgtttagtaagcctagtcaattacgattg
catcttaacattcattattttgagcggccatatagatgtgaaaattgcgcggtttctttc
cgaactaaaggccacttaacgaaacatgaaagatctgtttcccatcacaataaggtcagc
atgacttctacatttggcgcggcaactaccagcaatcctaggccttttaagtgtaaagat
tgtgcggtagcatttagaatacatggacatttggccaagcatcttcgtagcaagatgcac
atcatgaaattagaatgcttgggtaaacttccgtttggaacgtacgcggagatggaaaga
tctggtgtcaatttaaatgatatcgatactacagactgtgataatagtcttactagtctg
caaatgttggctcaaaaactagaaaatccgaaaaccacgcaatgggattcagaaactgtg
cccggaccagttgtaagtagcagcgagacctcgtcagatgagggtgaacctataccgcag
cacacccttcacgcacaatacgtgaaaccaacgccggacgtagacatctcccgaccatat
cacatgtcgatcgtttcggagaaatcaaaagccattaacgacgctcgcctccgcagccct
cagtttaatcagcaaaggcgtgattacgcagttaaagagcaacgaccgatttcgacgatt
atttcaacggaagatataaggccggaggacaatttacaatcgtacaagtgccaagtttgc
cccgtatctatgcatactgtaaacgagttgcaggtacattgttttgttgaacataatatt
gagacagatactagtacaaatattcatggcgatagaagtgcgggtaaatgcagcagagaa
aaagagaatactcacaaaaaaaaaatagaggaatcgacagtgaaagaagatcacaaaaga
caaaggctagaggatacatag
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